Gene detail

Detail information of Am03G017400.1 Annotation

Gene ID	Annotation
Am03G017400.1	Glyceraldehyde-3-phosphate dehydrogenase-like family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G017400.1	mRNA	Chr03	49597555	49604990	-

Sequences

CDS:

>Am03G017400.1
ATGAAGACTATTCCTCTGATTCTAATGGGATGTGGAGGAGTTGGTCGTCACCTTCTCCAACACATCGTCTCATGCCGTTCTCTTCACTCTACACAGGGATTCTGTTTGAGAGTTGTGGGTGTTGGTGATAGTAAATCTCTGTTAGTTGTTGACGATTTGTTGAATAAAGGGTTGGACGATAGCTTGTTGTTAGAACTTAGCCAGCTTAAGCGTAGTGGCGAATCTCTATCAAAACTTGGTGATGTTGGAGGATGCCAGGTATTTGTGCATCCGGAATCCCAAGGAAAGATTTTAGAGATTGCATCTCAACTCGGTAAAAAGACAGGTTTGGCCTTTGTGGATTGCACTGCTAGCTCTGACACTATTGCGGTGCTAAAACAAGTGGTTGATATGGGTTGTTGTGTTGTTATGGCAAATAAAAAGCCTCTTACATCTTCAATGGAGGACTTTGAAAAACTTTTGGCATATCCACGTCGTATCAAACACGAGTCAACTGTAGGTGCTGGTCTTCCTGTGATAGCATCCTTGAATCGCATAATCTCTTCCGGTGATCCTGTTCACCGCATTATTGGGAGTTTGAGTGGGACATTGGGGTATGTAATGAGTGAGGTTGAAGATGGAAAGCCGCTGAGCCAAGTTGTTAAAGCTGCTAAAAGTCTGGGGTACACTGAACCGGATCCACGTGATGACCTTGGTGGAATGGATGTCGCTAGAAAGGCTTTGATTCTTGCTCGAATACTTGGGCGTCGAATTAATATGGTTAGCATTCAGATTGAGAGCTTGTATCCCAAAGAAATGGGGCCTGATGTAATGACTGTCGAAGTCTTTTTGGGCCGTGGACTCTTGTTGCTAGATAACGATATTCAAGACAGAGTTGAGAAGGCAGCTTCAAATGGAAATGTTCTGCGCTATGTCTGTGTGATTGAGGGTTCAAGGTGTGAAGTTGGTATTCGAGAGCTTCCAAAAAATTCTCCCTTAGGAAGACTAAGAGGAAGTGATAATCTGTTGGAAATATACACTCGATGCTATAGCGAGCAACCACTGGTTATTCAAGGTGCTGGAGCTGGAAATGACACTACTGCAGCAGGTGTCCTTGCTGATATTGTGGATATTCAAGATTTATTTCCTTGA

Protein:

Promoter(3k):

>AM03G017400.1
GAACCTGTTATTTTAGGCAAGCCCTTCACCATGCCCTTCTTGCTCAACAACTGTAGCCCCTTAAAATTCAAATGCCCATATCTATTGTGCCACAACATGCTTACATTCTCATCAGAGGTAGCTTTAAAACAGTTTGGCAGAATTAGTTCTACAGAGGTTCTAAACATTCTATTAGCAGACATTTTAGAATCAAATAGCAGTCCTCTAGTTGGATGAACTATCTTACAAGTGTTATCCTCAAAAGTAACCTTCAAACCCTTCTCTTGTAGCTGGCCTATGCTCAACAGATTATTTTTCAATGATGGAATATAGTATATACCAGTGATCAATTGAACAATTCCATTTACTTTCATTTTGATGCTACCCTTCCCCGTAACTAGCACTTTGGAGCCATCACCCAACCTAACAGTGGTTCTAAAGGTTTCATCTAAGGTAAAGAACCAGTCTTTGAAGCCACACATATGATTACTACAACCAGAGTCGAGAAACCATACCTTTAGGGTAGCTGTATCAATGCAATTGGTCTGGACCATCAATAGAAAGTCTTCAATCCAAGTCTCCAGTTCTGTTTCTTCTTCTTCACAATCAGTGCATGCCATCAGCAAGAGTTCTTCCTCTTCATCATCCTCTGCGTAATTAGCCTTTTCTTCAAAATTTGGACACTCATATTGATAGTGTCCCATCTTGCCACAATGATAACATTCAATGTTCTGCTTACTGACTTGTTGCCTTCCTCTGCCACGATTGCCTCTAGCCCCTCGTCCTCTTCCTCTTCCTCTAGAAGTGGTGGTGATTTTCAAAGCTTGATCTTCTTCTTTAGGTTTTTGCTCATTCAAGAGTCGTTCGTGCACCAGCAAGCTGCTCTGCAATTCATCTACTGTGAGGGTAGAAGTGTTGTTTGATTGAACAATGGCGCATACCACATAGTTGTATTTTGGTCCCAAAGAGCGAAGAATCTTCTCCACTACACATTCTTCATCGGTCTTGGTGTCGCCATATGCTTTCATCTTTCCCACGACGGCGAGAGTTCTAGCAAAATACTCATTCACGCCTTCATTCTCCTTTCTTGACAATCGCTCAAATTCTCCACGAAGAGCCTGTAATTGAGCGCGCTTTACTTTGTTCGTACCCTGATACTTCACCCTCATCGAGTCCCAAATTCCCTTCGCGGTGTCTTTCTCGAGAATTGTCTCGATTATTCCTCTTTCAATTGATTGAAAGAGGTAATTCTTAGCCTTTAAGTCTTTCAACTTTGCTTCTTCGATCTTCTTCAATTGTTCCGGTGTCGTCATCTCCGTAGTCGCCGGAATCCCTTGCTCGACCACTCCCCAATATTCCTTAGATCGGAGTAAATTCTCCATCAGCATCGACCAGTGGTCGTAATGACCATCGAATTTGGGTACTGCAGGTTGAGAGAAGTTCTTTTCTTCCGCCATTGATGCAATGCGAAGCACAACGATCTTTCACGCAAATTCTTTTCTTCTTGAAACAACAATCTTTGGCGAATACTGCAGATTCAGTATCAGGCTCCAAGAATGGAGCTTTGATACCAATTGTTGGAACCAAACAATGAGAAGAAAGTGTGTAAAATCGTATTCAGTTAGCCACTTTGTGGTTAGTTTATACAAGAAGTAGTTCTGTTAACTAATGCAACTGAAAAGCAAACAAACTTGGCTAACAAACTCACTTAAGTGGACTGGGCCATTAGTCCTCTATACAAGCCCATTACAAGTGGCCTAATACAAAACACTACAAGAGGGCCCAATTGACCCAATATGAGCATCTCACAATCAACTCTAAATAGAGAAATCCTTAGTGCTAAAACTTAGTTTTTGTTGTATTAAGTGTTATTGTTTTGGGCTTAGTCCCCCAATTTTTGGCAATAACAGTTATCGTAGTAAAAATTTTACGATTTAGAAATTTATGTCTCCTCCCAAGTTTGGGAATATATTTATTCAATATGTTTTTTAATATTGCTAGCAACACACATTTTAGCACAGTTTTTTAACATCCATTCAATATATGTGAAATTCATAAAATGCCACCACTTTTAATAAGACCTACATGGAATTATCCAATCATAGAGACCACCGGAATGAGAGTGTGTTACAAGGCCAATGAATATTTGTCTACCGAGGTCCAAATCCATTTACCGATGTGATGACCTCGTTGATCGGTAGTGTGTAGGTAGGTAAGTTTTCTTTCGGTCTCCAAAAGTGTTTAAATTAAGACACAAAAGTCCACTTATAAAAGTCAATCAATCCAAATCCAAAAACTCTCTTATTGTAGTGATCTCCTGAGACCCATCTAAACTTTTTTCCCATAAAGCCTTTTTCATATTATCGAGTACAATTACAAGTGGGTGTAGCACAAATGGTAAGTTGTTTGGGCTCCTTAAGCATTTGGTCAAGGGTTCGATTCCTGGCCGGTGTGTATGGAGAGACATCGCTTGGGAGGGGTCAGCCCTTAAATGAACTCCAATACCTCGAGGGATTAGCCTCCACATTCGCCGTGGAGGATACCCGGGTTTACCCAAAAAATATTATCGAGTACAATCGCGCTACAAAATCAACAATAAAACTGATAGCTAATGCAATTCAAATATATGATTAATAACCAACACCGTTAGCTCAATGAAATTTGATTAATAACCACGTAACTTGGTAGGAAGTTTTGTCAAAAAAAACTTGTATAAAATGAGATGGTAGGGGTTTCTTTCAGCATAATAAAGAGCCGTGTTAAATCTCTCGAGGGAGAGTTTTGCCAGCTATTGTGATCCTACTAGAGAGATTAGTCTCTGGAGTTACGCGCAGATAGTTTACGACAAAAAAAAACTTGTATGCCTCAAAAAAAACCTGTAGGAAGTTGATTCATATTTCTCATATCACACTCTCACAGTCGCACACTCCCTTCACTGTTCTCATATCTACTTACTACTTCTTCCATTGTACAAAAACCCTAAAATTCAAAAGAAAAAGAAAAGTGAAAAACTCACTCAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00742.22	Homoserine_dh	171	369	4.20E-48

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0009088	threonine biosynthetic process	Biological Process
GO:0009097	isoleucine biosynthetic process	Biological Process
GO:0009086	methionine biosynthetic process	Biological Process
GO:0050661	NADP binding	Molecular Function
GO:0016301	kinase activity	Molecular Function

InterPro

InterPro term	Description
IPR036291	NAD(P)-binding domain superfamily
IPR019811	Homoserine dehydrogenase, conserved site
IPR001342	Homoserine dehydrogenase, catalytic
IPR022697	Homoserine dehydrogenase lacking ACT domain
IPR011147	Bifunctional aspartokinase/homoserine dehydrogenase

trEMBL

trEMBL term	Description
A0A9D4WQ08	_

SwissProt

SwissProt term	Description
AKH_BUCAP	Bifunctional aspartokinase/homoserine dehydrogenase

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G21060	Glyceraldehyde-3-phosphate dehydrogenase-like family protein
Medicago sativa L.	MsG0380015875.01.T02	_
Oryza sativa L.	LOC_Os12g03190.1	bifunctional aspartokinase/homoserine dehydrogenase, putative, expressed
Cucumis sativus L.	Csa012891	_
Glycyrrhiza uralensis Fisch.	Glyur000203s00012884.2	_
Codonopsis lanceolata	Cl_chr02_36960T	_
Arachis hypogaea L.	AH05G31290.1	Bifunctional aspartokinase/homoserine dehydrogenase like

Expression pattern