| Gene ID | Annotation |
|---|---|
| Am03G016520.1 | histone deacetylase 6 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am03G016520.1 | mRNA | Chr03 | 46537832 | 46542567 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00850.22 | Hist_deacetyl | 45 | 338 | 2.90E-86 |
| Gene family | Subfamily |
|---|---|
| Epigenetic Regulators | HDA6 |
| GO term | Description | Category |
|---|---|---|
| GO:0004407 | histone deacetylase activity | Molecular Function |
| GO:0006338 | chromatin remodeling | Biological Process |
| GO:0005634 | nucleus | Cellular Component |
| GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process |
| GO:0046872 | metal ion binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR023696 | Ureohydrolase domain superfamily |
| IPR000286 | Histone deacetylase family |
| IPR037138 | Histone deacetylase domain superfamily |
| IPR023801 | Histone deacetylase domain |
| IPR003084 | Histone deacetylase |
| trEMBL term | Description |
|---|---|
| A0A1S2YBI5 | _ |
| SwissProt term | Description |
|---|---|
| HDA6_ARATH | Histone deacetylase 6 |
| KO | Description | Enzyme |
|---|---|---|
| K06067 | histone deacetylase 1/2 | [EC: 3.5.1.98] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G63110 | histone deacetylase 6 |
| Medicago sativa L. | MsG0380015770.01.T01 | _ |
| Oryza sativa L. | LOC_Os08g25570.1 | histone deacetylase, putative, expressed |
| Cucumis sativus L. | Csa005330 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000276s00017158.1 | _ |
| Codonopsis lanceolata | Cl_chr02_11910T | _ |
| Arachis hypogaea L. | AH11G19520.1 | Histone deacetylase 6 like |