Gene detail

Detail information of Am03G016230.1 Annotation

Gene ID	Annotation
Am03G016230.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G016230.1	mRNA	Chr03	45604994	45607870	-

Sequences

CDS:

>Am03G016230.1
ATGCAGCCAACAATGGCTGCGAAAATTCACCAACACTTATTTCTCTTCTCATTCTTATCCCTTTTCTTCACCCTCCAAGCTAACCTCCATCTTCACCCTTCAGACCACAACGCTCTCACAACTCTCCAAAACTCTCTCGGAGTCAACGTCAACGGTAACAGTAACGCCACCACCAACCAACCGTGTAATGCGGACGGCGTATTCTGTGAAAGAAGACTCTCCAACAATGAAACCTATGTCCTCAGAATCACCAAACTCATCTTCAACTCAAAAAGCCTCAAAGGTAAACTTTCCCCTCTCATAGGACGCCTTACTGAACTCAAAGAACTTTCTCTTCCACACAACAAAATCGTTGACCGAATTCCAACCTCCATCGTTGACTGCAGAAAACTCGAGATTCTTAACCTCTCTAACAATCTCTTCTCCGGTGAAGTCCCTTCCGAGTTCTCCTCCCTCATTCGCCTCCGTATCCTCGATATCTCTTCCAATAACCTCGCCGGAAATTTAAATTTCCTCCGCTATTTTCCGAATCTAGAAACCCTCTCAATCGCTAACAACCTCTTTACCGGTAGAATCCCCTCTTCAGTTCGTTCCTTTCGTAATCTCAGACACTTCAACTTCACCGGTAACCGTTTTCTCGAATCCTCTGTTCCACTTAACCAAAGACTTCTTGAATTTCAAAATACCGATACTACCCCCAAACGCCATATCCTTGCTGAGAACCATGCTACAGCTTCAGCACCTTCACCTCACCACAAAAAATCTTCTAATGCTTCTGCTTCTGCACCTGGTCCTTCAGCAACGGTTCATGATCACCACAAGCATAAGAAAAGTAAGAGAAAGTTAATTGGTTGGATTGTTGGATTTATTGCTGGAGCATTTGCAGGAACACTTTCTGGTTTTGTATTTTCATTGTTGTTTAAACTAGCTTTGGCTTTAATCAAAGGAAAAGGAAAAGGTTCAGGTCCTGCTATTTATTCTCCTTTGATTAAAAAAGCTGAGGATCTTGCTTTCTTAGAGAAAGAAGATGGTTTAGCTTCAATGGAAATCATTGGAAGAGGTGGTTGTGGTGAAGTTTACAAAGCTCAATTACCAGGAAGTAATGGTAAAATGATTGCTATTAAGAAAATTATTCAGCCTTCAAAAGATGCATTGGAGTTAGCTGAAGAAGATAGCAAGCTTCTTCATAAAAAAATGAGGCAAATCAAGTCTGAGATTAACACTGTTGGTCAAATTCGTCACCGCAATCTTCTTGCTCTTTTGGCTCATCTTTCTAGACCTGACTGTCACTATCTTGTTTATGAATTCATGAAGAATGGAAGCTTACAAGATATGTTGCACAGAGTTGAAAAAGGTGAAGCTGAATTGGATTGGTTATCAAGGCATAAGATTGCAGTTGGTGTAGCTGCTGGTCTTGAGTATCTTCACATGAGTCATAGTCCAAGGATCATTCACAGAGATCTTAAACCTGCAAACATTCTTCTCGACGATGATATGGAAGCTCGGATCGCTGATTTTGGACTCGCGAAAGCAATGCCGGAGGCTCAAACACATGTTACTACTTCAAATGTTGCTGGTACTGTGGGATATATAGCACCTGAGTATCATCAGATACTTAAGTTTACTGATAAGTGTGATATATATAGTTTTGGTGTTATGCTTGGTGTTTTGGTTATAGGAAAGCAACCTTCTGATGAGTTTTTTCAGCATACTGATGAGATGAGTTTGGTTAAGTGGATGAAAAATGTTATCACTTCTGAAACTCCTAAGATAGCTATTGATTCTAGGCTTATGGGGAATGGATATGAGGATCAAATGCTTTTGGTTTTGAAGATTGCTTGCTTTTGCACTATGGATGATCCTAAGGAAAGGCCTAACAGTAAGGATGTTAGGTGCATGTTGTCCCAAATCAAGCACTGA

Protein:

Promoter(3k):

>AM03G016230.1
ACTTTACCATCTCATTAAATAATTACCATTTACCTCATGCATTTTTACTTTACCATCTCATTAAATAATTACCATTTACCTCATGCATTTTTACTTTACCATCTCATTAAATAATTACCATTTACTCCATGCATTTTTACTTTACTTTTCACTAACTTCTTACTTAAAGTTTTACAACTTATCAACTTGCAAAAATACCCAAAACATTTTCAAATTCATGCATCTTCATTCATATTTAGTTTATGTGACATTCTCATGCATCTTCATATGCTTATATCTCTTGCATCCTCTTATGCATCCTTGTATGCCATCCATTCATAAATAAAGTGCTATGCATCCATTCCTTGTACACTCATGCACTTACATGCTTACCTAATCATGCATCATTGCTTACATACTCAATCATTTAACTTAGAATACTCTATGTTTACAATCAATTGTATTCACTTGTTCTTGATGCCATGTAAATGTCTTGACTTGATTGTGTGCCCTCCTCTCCACTTGTATGACCTCCTAATGGAGACGTGAGTCTACATGCATGTTGTAGCATAGAGCCATTAGGGTAAATACAATCCTTCTCACACACACACACAATTACTTTGAGAACTTTGTTTTGCATCTTTAATAATTGAATCCTTTGATTGTATGGGCATGTTTAATCTTGGTTAATGAGTGATATGTTCATGTTTGCTTGAGTATTATTCATTCATTTGCATTTGGTTATGGATTTAGAATTGACTTGAAATGTTCTACTCCTTTTCTAAAACCCATTTCCTAAAATCATTTCAAAACAAAAAGAAACTTTTACTTTCAAAACAAAAATAAATCAATTGTCATTAAGCACCAATCGCGCCGTTGCCGATTAGGTCGTTAATGATGATGTTGTTTTCAAAAGGAGTTAGTAGCGAGACCATTCTAACCGTTGTTGTTCGGTCTTCGCAAAAGCTCTATCCCATTTTCGAAAACTTATTCATTTCTCCAAAATAAAACAATTGTCATTAAACACCAATCGCGCCGTTGCCGATTAGGTCATTAATGATGATTTCATTTTCAAAAGAGTTAGTAGTGAGACCATTCTAACCGTTGTTGTTCGGTCTTCGCAAAAGCTCAATCCTTTTTCAAAACCAAAACCCGAGAACTACGTAGCTTTGATCCCTCCTCTGGTGAGGGTACGTAGGAGCGGGGTCCTGTCCCGTCAAGCACCCTTTTAAAAAATCTTTGTTTTGTTCCGCTTTTCAAAGATACCAAAAATATTCTTCTTCCCCCCGTTTTCAATAAAACAATTTCTCAAATGAAATAAAAAGAAAAGGAAAGAAAAGAAAAGAAGTAGAACAAACCGCTTTCAAACTCAAACTTTTGTCTAAACCACACATCAAGTTAATGGTTCCCTTTCGGTAGAAAGGAGGTGCGGGGTGCTAGTACCTTCCCCGTACCTAACCGACCCCCGAACCTACATCTCTAGTTTTCAAAAGACCATCCGCCTTGTTTAAAAGACCTTTTTTCAATGTTTTGGTCTTAAAATTAAAATATTGGTGGCGGCTCCGAACTTTTTCCACGTTGTCAAACGAAAAGTCCCAAACCGGATTTTTCGGGCGCAACACCAACTTGCCAATGAGTTCTGAGAACAGGGGTCTTGGAATTGTTTGGCATCACAAATATACCCTTGAAAATCATTTGATTTTATGAATTCACAAGCTAATAAGATTGCTTATGCCATATCTCTAGTCGATGTGGGACTTCAACACACCCTTCACGCTCAGGACTGGACATCTGAAGCATTGACTGATACAGGTGAAATAACTAGGATCTCAACACACCCCCTTCGTACCCAGGACTAGACAACTGGTGTATGAAAAAACATGTGGAATAATGGAGATCTTGGCCCAATAAGAAATCTAGAATAGGCTTAGGCATGGATATTTGTGAGTCATAACCAACATAAGTCAGTAATGATGATGAAGCTGGCTCGAGGGAAGATCGAGGAAGAAGCTTAAAAAAATTGAATGATGAAGCTGGGTCGAGGGAATATCGAGGAAGAAGCTTCAAAAAATTTCTTGAATGATGAAGCTAGCTCGAGGGATAATCGAGGAAGAAGCTTCAAAAAATTTCTTGAATGATGAAGCTAGCTCGAGGTATAATCGGGGAAGAAGCTTCAAAAATTTTCTTGAGTGCACGCATCAAGTTACGAAATTTGTCCTTAGGAAGATGTTGAGATACCAACACAAGACCGGGATTATCCGAAGGAGGGAGGTAGAATGCGTCATCGTAATTTGTGGAGGATTTGCCATGACAGAGATGAGTTGAACAACAACCAAGTAGATCAAAGAATGAAGGAAGAATGATGAACGATCTCAAATAACATGCGGAAGAAAATCAAGAAAGTTCTTCTAATACCACGATGAGCACCATTGTTCATGAATTGCAAATCAGAAGAAGAAATTCGCGAGAAGACAATGGAGGAATCATCGAGGAGAGAGGAACGCGGAAGCTATATCACTTATGATACCATAGTTGCTCTGATACCATATTAAAAGTGTGGCGTCAGTTATATATGAAACAGAGAACTGAGAGTGAAAGTCTCATTTTATTGATTGATGAAGTGAGTGAAATTGAATGTACAGCAAAAACTTAGTAGAACTGAGTTTAAATAATACCAATGTATCATTTATCTTCTCTAACAGTCCTTTATTTTCTAAACAAACTCTAAAAACAGAATAATTAACTAACTAGATACAATTAAATAAATAATTGAAGTGTAAGTTAATAAAAGGTGCTAAAAACAACCCAAAGGTCTTTTTTGAAGTGTTGGATGTGCTAAAACTATGTAAGAAAATTCAAAGTAAAAAAGAAGTAGAAGACCGTATAAGTAGAGACTGAAGACTAAAGAGAGTATTCCACACGGTTTTGCGACTGTAATTAGAATAAATAAACCGAGGGAAACAAACAGCATCAAGAATTCAAGTAACAGCAATTCTGAATCCAAACCAGAACAAACAAACT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	348	628	1.90E-43
PF07714.20	PK_Tyr_Ser-Thr	348	582	6.80E-38
PF13855.9	LRR_8	106	165	1.10E-11

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.12.5:RLK-Pelle_LRR-XI-2

Gene Ontology

GO term	Description	Category
GO:0004672	protein kinase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0A9D4WTB9	_

SwissProt

SwissProt term	Description
SBIR1_ARATH	Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G31880	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0380015735.01.T01	_
Oryza sativa L.	LOC_Os06g18000.1	protein kinase domain containing protein, expressed
Cucumis sativus L.	Csa005229	_
Glycyrrhiza uralensis Fisch.	Glyur000947s00021195.1	_
Codonopsis lanceolata	Cl_chr06_35620T	_
Arachis hypogaea L.	AH13G01500.1	Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 like

Expression pattern