| Gene ID | Annotation |
|---|---|
| Am03G016020.1 | radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am03G016020.1 | mRNA | Chr03 | 44934685 | 44938674 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF16199.8 | Radical_SAM_C | 329 | 408 | 5.40E-32 |
| PF04055.24 | Radical_SAM | 123 | 311 | 7.00E-18 |
| PF00583.28 | Acetyltransf_1 | 415 | 551 | 8.20E-10 |
| Gene family | Subfamily |
|---|---|
| Epigenetic Regulators | HAG3 |
| GO term | Description | Category |
|---|---|---|
| GO:0051536 | iron-sulfur cluster binding | Molecular Function |
| GO:0005634 | nucleus | Cellular Component |
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0005737 | cytoplasm | Cellular Component |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR032432 | Radical SAM, C-terminal extension |
| IPR007197 | Radical SAM |
| IPR000182 | GNAT domain |
| IPR039661 | ELP3/YhcC |
| IPR006638 | Elp3/MiaA/NifB-like, radical SAM core domain |
| IPR034687 | Elongator complex protein 3-like |
| IPR016181 | Acyl-CoA N-acyltransferase |
| trEMBL term | Description |
|---|---|
| A0AAN9FSS4 | _ |
| SwissProt term | Description |
|---|---|
| ELP3_ARATH | Elongator complex protein 3 |
| KO | Description | Enzyme |
|---|---|---|
| K07739 | elongator complex protein 3 (tRNA carboxymethyluridine synthase) | [EC: 2.3.1.311] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G50320 | radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein |
| Medicago sativa L. | MsG0180004250.01.T01 | _ |
| Oryza sativa L. | LOC_Os04g40840.1 | elongator complex protein 3, putative, expressed |
| Cucumis sativus L. | Csa005233 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000737s00020109.1 | _ |
| Codonopsis lanceolata | Cl_chr02_10570T | _ |
| Arachis hypogaea L. | AH03G22750.1 | Elongator complex protein 3 like |