Gene detail

Detail information of Am03G015580.1 Annotation

Gene ID	Annotation
Am03G015580.1	myb domain protein 93

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G015580.1	mRNA	Chr03	43679940	43681459	+

Sequences

CDS:

>Am03G015580.1
ATGGGAAGGTCCCCATGCTGTGATGAGAATGGCCTTAAGAAAGGACCATGGACTCCTGAAGAAGATCAAAAGCTTGTCCAGCACATTCAGAAACATGGCCATGGAAGTTGGAGAGCTCTCCCTAAGCTAGCTGGTCTTAATAGATGTGGAAAGAGTTGTAGGCTAAGGTGGACCAATTATTTAAGACCTGATATCAAGAGGGGCAAGTTTTCTCAAGAAGAGGAGCAAACAATTCTGCATCTCCATTCTATCCTTGGAAACAAATGGTCAGCAATTGCAACTCATCTTCCAGGAAGGACAGATAATGAGATAAAGAATTTCTGGAACACTCATTTAAAGAAAAAATTGATTCAAATGGGTTTTGATCCAATGACTCACCAACCAAGAACTGATCTTATTTCCACCTTACCATATCTACTAGCTTTGGCCAACATGACAGAACTCATGGATCATCATTCATGGGATGAACAGGCAGTCCAGCTGGCAAAGCTTCAATACCTTCATCAGTTACTCCAATCTTCAAATCTTTTAAATATTACCAACTCAAGTTATGACCAAAATACCCTCATAAACATGGAACCTTTAACTTTGCTGAACACAATTTCTTCTAATGTGAAAGAAAGTCAAGTTATAGAGTCCTCCTCACAACTGGATACTACTCAATTAGGGTCAATATTTTCTCATGGGATTGTTGGCTCTGATCAGTCTTCTCAACTACTCCACCACCAAAGCATGGTATTACCTCAGTTATTAGACCCACAACAACAAGTCTCTTTCAATTCACAATCATGTTTGAATAATGAACAAGGTCAAGCTACTACTAACTTTGCAATGATAAGTCAAGGAGCTGATGATGACACGTCATGGATTATTCCTTCTATTCCTACAAATGAGATAGGGACCTCAGTTAACAATCCTGGAGATGCTAGCAGCAGCACTTGTAGCTATGGAGGAGGACCTTCATCTTATTGGTCTGAACTATTTTTTGAGGACCCCATTAATAATATGCATGACCTATCTTAA

Protein:

Promoter(3k):

>AM03G015580.1
TAAGAGTTTTATGAGTGGAGTGTAGACTAGTGGGAATAGGTTGGGCTGAGCTGGACTTTGCAAGGCTGAGTCTAGCCAGTGTTGAAAGTGTTTGGCATGAGTCTGACTTATGGCCTGTCATAGACCCAACTTTTAGGTCTGACCTGATGTTGATGAAAGCTTGACAAGACTTGGAAGTCTATGTCTATTTCAATATTATTATTTTTTACCAAAGCCAACAATCTTTAAGTGAAGTATGTTTTTGTAAATAGACTAATAAACTAATAGATCAGTTAGATTAAGTTATATTTTATATAACATCCAATTTAATTTCTATTTTATAATAACAACTTTAGGTATGTCAAAAATTGATGTAAGTCAATATTTTTAAATTAACAGAAAATACTAGCAAATTTATGATTTAACACACAGAAAATACTTGCTCGCCCTTGGTTAGTTCGCCTCCGTCATGTCTATCGGGAAGCCAATTTTTGCGCTGATTTTCTAGCTAAGTTGGGATTGTCTTCGCAGCAGCAACATGTTCACCTTGCTTCTCCTCCCCCGGGAATGATCCAGCTTCTCCAAGCTGATGCTCAAGGAGTGCCTTTCGTGAGGCCTTAGTCTTGTTTTTTGTTTTATTTCTCTTTTGTAACAAAAAAAAATAGGCTAAATTATAGTTTTGGTCCCCCTATTTTCAAAAATTCAGACATTTGGTCCCCCTATTTTAAAACTCAGACATTTGGTCCCCCAATTTCAAAAAATCAAAGACATTTAGTCCCAAGAGGAATTTTCAGTTTTTTATGGCTAATAATCAAAGACATTTGGTCCCTCAATTTTAAAAAATCAAAGACATTTGGTCCCCCAATTTTAAAAAATCAAAGACATCTGGTCTCTCTTTGGACTAAATGTATTTGATTTTTTAAAATTGGGGGACCAAATGTCTGAGTTTTAAAATAGGGGGACCAAATGTCTGAATTTTTGAAAATAGGGAGACCAAAACTATAATTTAGCCAAAAAAATAATAGTAATAATAGTAATAAAAAAATTATTTATTTTTACTTAAATAGGCTGGTCTGGTACGCTTAAGAGACTTTTTCAATGACTTGTAACCGGGCCATTTTAACTACATGAGCTTTTAAAAAAGGCCAAACTTTATGTATTTAAAAAATAGTCTGGTCTGGCCTATTCCCACCCCTTGTGTAGACCCACCCACTAGAGCGCCTCCGTATGGGTTAGTTTTTCTCCCGAGTGGGGGTGATATTTCGGTGAATGTCATTAGATGATTGAATGTTGCGTACCATACCAAACAAAACTCTAAGCATCGTAGTGTTCACCTAAAAATAAAATAAACACTTTAGATTTTTTTTTTGAGCAAAAACACTTTAGATTTTAAAATTGACAGGTTGCAACATTATTGGAGGCATACATCATTAATTTTAGGTGAACACTCTCATACCCATTGAGGTTTAAAAGTTATGATACCCTATCCAATCACTCAATGACACCTCATTTTTTTCTATTTAAATATTTTAAAATAAAATTAAAATTGAACTAATTTACTCTTAATGAGTATAGTAGAATTTACCTTAATTTTATAATCTAAATATGAAATTAACTTCGCGTTACACTTAATATTGTTAAGTTGTGTAAGAGGTACATGGTAATATACTAATATATATGTAGAGCGCTCTTTTTCTGCCGTAGGAAATATCCGTGTTTCGTACACTGATTGTTTGAATTACAATAACAATAACAATAACAATTCTGAAATTGTTTTCATGGTACTGTTGACTGAATTATTCTTTATGGGCCATGAAATCCAAGAAGAGAGGACGTGATACTTTCTAAGCCATGCAAAACCATGACGAAAGTAGGAAGCAGCCTCCTCGTTGCGTGCATGGGAGGGGTTCCTCCAATAATCAATTAGGCACTAATTTGCCACGTATTACGTAATCTAATTTGTAAGTTTTCGATCTCCCTTAAATCACTATAATTGAAACTACAATATATTCAGTCCATAATTACCAAATTGCCTGATATCTTAATATATATTTCATTTTCAAATTTTACATGGAGGGAGAGCCTAGAGAGGAAAACATTAATTTATTGCTGTGAAAGTCATACTTATTTATAAACAAGAAAAAATGGTTTTGCAATTGAATAAAATCACGTCTTTTTTTTCTTCTTAAAGCTCTAAAAGTAGGTCTTAAACAAACTCATGTGGACAGATTGTGTATAAAAATAAAAAATTATACACAATTAATACATTTATACTAAAAGATTAGAAAACATAATTAATTTAATAAGTAATGCGTCCAATGATTTAACAAATTGTCCCAGTAAGGTAGTTTAGTTGGCGAGCTAAGGGACATGAAGAAGGTCCAGGGTTCAAACCCCAGAAACTAACATTCCCCCACCCACACTAACATTTGCTTATCAAAAAAAAAATGATTTAACAAATTGGAGGGAATGCATTAAAATGTAAAGTATTACTCTTTGTAGCGGATAATTTGCGGCAAATATTTTTTGGCATTTCCGGCGGATATCCGCCGGAAACTTGCGGCGGATTTATCGGCGCCACCTGGCTACCGACGGCAAAAATCCGCCGCAAAAATCCGCCGGAAAGCGTTTGCTGCGACCTGGCTACCGACGGCAAAAATCCGCCGCAAAGTCCAATTTTGCGGCGGAAATATGGCTTTTCCGGCGGATTTTGCCCGCCGCAAAATCCTGTTTTTCTAGTAGTGTACTGATATATAAAAAAAAAAGACACTAATTATTACTAGTAAAATGTATGCATTCCCATTGTGAAGGGTATACTTGGTACAAGGAATATGACATTTTGTTGTTTCATACTTTAACAAGATCATGGAAGTGTCAAAATCTTTTATAAGTCTAAATAAAGATAATTAATGTCAAGAAGCAACCAAAAGGAATAATGGATATATAAATAGCATGCCCCAGCCCATATGTTTAATTAGGTGGTAAAAGAGGAAAGGATAATAGCTAGCAGTAATTAACAGA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	14	61	1.30E-34
PF00249.34	Myb_DNA-binding	67	112	1.30E-34
PF13921.9	Myb_DNA-bind_6	17	77	7.70E-22
PF13921.9	Myb_DNA-bind_6	70	118	7.70E-22

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0071365	cellular response to auxin stimulus	Biological Process
GO:0005737	cytoplasm	Cellular Component
GO:0016020	membrane	Cellular Component
GO:0006355	regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A371H1V5	_

SwissProt

SwissProt term	Description
MYB93_ARATH	Transcription factor MYB93

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G34670	myb domain protein 93
Medicago sativa L.	MsG0580025507.01.T01	_
Oryza sativa L.	LOC_Os06g11780.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa003349	_
Glycyrrhiza uralensis Fisch.	Glyur001933s00036045.1	_
Codonopsis lanceolata	Cl_chr01_37710T	_
Arachis hypogaea L.	AH17G31950.1	Uncharacterized protein like

Expression pattern