Detail information of Am03G015170.1 Annotation
Gene IDAnnotation
Am03G015170.1 ubiquitin-specific protease 27
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am03G015170.1mRNAChr034201438842020900-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00443.32UCH44339.20E-35
Gene family
Gene familySubfamily
Ubiquitin FamilyUSP

Gene Ontology
GO termDescriptionCategory
GO:0016579protein deubiquitinationBiological Process
GO:0005829cytosolCellular Component
GO:0005634nucleusCellular Component
GO:0016020membraneCellular Component
GO:0006508proteolysisBiological Process

InterPro
InterPro termDescription
IPR018200Ubiquitin specific protease, conserved site
IPR028889Ubiquitin specific protease domain
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR038765Papain-like cysteine peptidase superfamily

trEMBL
trEMBL termDescription
A0A0B2RHD6 _

SwissProt
SwissProt termDescription
UBP27_ARATHUbiquitin carboxyl-terminal hydrolase 27

KEGG
KODescriptionEnzyme
K11851ubiquitin carboxyl-terminal hydrolase 30[EC: 3.4.19.12]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT4G39370 ubiquitin-specific protease 27
Medicago sativa L.MsG0480023407.01.T01 _
Oryza sativa L.LOC_Os04g34984.3ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed
Cucumis sativus L.Csa018662 _
Glycyrrhiza uralensis Fisch.Glyur000048s00002269.1 _
Codonopsis lanceolataCl_chr05_12810T _
Arachis hypogaea L.AH03G33530.1Ubiquitin carboxyl-terminal hydrolase 27 like

Expression pattern