Gene detail

Detail information of Am03G014840.1 Annotation

Gene ID	Annotation
Am03G014840.1	Jumonji domain-containing protein 22

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G014840.1	mRNA	Chr03	40761236	40762777	+

Sequences

CDS:

>Am03G014840.1
ATGCCGAGCTTGAGGATGAGTTATTTGTTGTCCCGTCTCAAAACAAGGACAGTTAAAAACAAAAGAAACAGAAAAAGAAGCACACGCAAGCTCAAAAACCAAAACTGCATTCCCACTACTAAAGATTTCCCATCTCTCGTCAAAGAAGAAGAAGAAGATGAAGGTTTCAGCATTAAAAGCTCTGCCCCATCACACACCCATGGCGTTCAGCCTTTGGGAAATCTTTATTTCAATCCAGGTTCCGTCAACTCCAGAGACACTGGTTTAGGTAATCTTCAAACCCTTTCAGATGAGCTCGTTCTTGACATTCTAGGGTTTTTAGATGGTACCAATTTGGGGGTTTTGGCTTCTGTGAGCAAGTCTTTTTATGTTTTCACTAACCATGAACCCCTTTGGAGGAATCTCGTGTTGGATAATCTTGTTGATGGGTTTCGGTTTAATGGGTCTTGGAAATCTACTTATGTTACTGCTTGTTACCCTTCATTTGATTTGTCAACTAATGCTCTTGGTAGTTTCAAAGTTAGAGACTTTTATTCTGATTATCTTTTCCAGAGTTGGCTTTGTGCTAATCTTGAAATGAAACCTGAATGGTTAGAGAGGGATAATATAGTTAGAAAGAAAGGAATTTCTGTTGAAGAATTTGTGCTAAATTTTGAGGAGCATAATAAGCCTGTGTTGTTGGAAGGGTGTGTTGATAATTGGGATGCCTTGAGGAACTGGGATAGAGATTATTTAATGAAGTTATGTGGTGATGTTAAGTTTTCAGTTGGGCCTGTGGAGATGAAACTCGGGGACTATTTTGAGTACTCGGATCAAGTTAGAGAAGAAAGGCCATTGTATTTGTTTGATCCAAAGTTTGCTGAAAAAGTTCCAAAATTGGGTTCTGAATATGAAGTTCCAGTGTATTTTCAGGAAGACTTGTTTGGTGTTTTGGGCAGTGAGAGACCCGACTACAGGTGGATCATTATTGGACCGTCCGGTTCCGGATCGTCTTTCCATGTTGATCCAAATTCAACTTCAGCTTGGAATGCTGTCATCAAGGGGTCCAAGAAATGGGTATTGTTTCCTCCTGATGTTATTCCGCCCGGCGTTCATCCTAGTCCCGATGGTGCAGAGGTTGCATCTCCTGTTTCAATAATTGAATGGTTCATGAATTTTTATGGCTCAACGAAGAATTGGAAAAAGAAACCAATTGAGTGTATATGTAAAGCTGGGGAAGTTATTTTTGTTCCTAATGGATGGAGAAATTTGATAAATGTTTTGGATTTTCTTCAAAGGCCTAATGCCAGCACACTGGTATCTGGAACAAGGGATCGAGTGAATTTGTACGATAAGTTTAAGAATACTATTGAGGCTACTTTTCCTGGAACAATTGATGAACTGACCCAAAAAGAAGAAGAGAAAAAGATCCAGCAAAGGAAACCTTCCTTCTGGGATTCTGTTACAGATTCCAATGTTGGAGCTTTCAAGTTCTCTTTCTAG

Protein:

Promoter(3k):

>AM03G014840.1
TAAAGCGTCACGGCGATGAAAATTAGCGCTAACAACACGTTCTCCGAGGTAGGTATCTCGTCACTACCGAGGCAAGAGAAGTAGAAGAAGAGAGAGCACGCACCGAGGAAAATCAACGATGCTACCGCTACAACCGGGGCGGTTATTCGGGTCGACCCGTTTCGTGGAGTGGAATTGTAAGAGTACCTTTGAGGATGGGAATGGGAATGGGCATGGGTTTGGGGTTTCTTGATTTTCTTCTTGTTGTTCTTGTCATCATCGTCGTCGATGGAAGAGAGACTGTGAATGGAGGATCGGATTGTTGGGGAAAGACTGAGGAGAGAGGATTGAGTTCTGGTTAGCTTTGCTTGGCTCTTTTGAGTATCCATTATTCCGTACCTGTTAACCAGATCTTTCTCGCCGGTAACGTGATATTCTTATGAGGTCTGTCGCCGGTAACATCTCACAGAGAACCGTACGAAGAGTACCATTCAAACTGAATTGAACTGTTTTTCCTTCTTCTGTTGTCACAACAAGAAAGGTTCTTTTTCTATTATTTATTCTGATAGAACTGTAAAAGGAAAAAAAAGAAAGAAATAGAGTTGGGTTGAGTTGGTCGAAGTTGGGAGAGGAGTGAGTGAAGGTTACGATACGAAAAGGAAGAGAGCGTGGAGTGGGTGCAGGGTTTGGTGTATTTATGGAGTGGAGGGAGTTAGATTCAATGTTGGTCATTGGATTGAGATCTAACGGTCAGATATCAAGATTGGATTAATGGCCGTTAGATTATGGTTGCGGTCCCGGTCTTGACGGGAAGATATGGTCATCGGATCTGGATTGGTTCGGCGTCATGGCTTTTCGCTTTATTGTTACAGGCCGGCACGTGCCGTCACACTTTTTAATTTTAATTAATAGTATTTTACCATGTGACTCGTTCTTCTCGTACTCAGGTTAATATTAGCCCCTGGTGGGTGGGTGGGTGGGTGGGTTAATAAACCCTTCATCATCACGACATATATCTAATCTGGGGCGCTGGCTGGGTGAGTGATAACCCTTGATACTTGGATGTTAAAAAAGGTAAGTAACAATGCCATTGGCACGGGTTGGAGTTAGAAATGTAAATTAACATGGCTTTTTTTGACATGATGTAAATTAACATGGTTCACGCGCTTATCAAATTTTGGTTTGGTAATATCATTGCTTTTCTATTTATTTTTTAAATTTTCTTTTATTTTTTTTGACAAATTTTTAAATTTTCTTATTTATAGTAAACTTTAGGTCAGTTGGAGATCAGCAAAAAAAAAAACTTTAGGTCAATTGGATTTCCCCAAGTCTTTAGGGTCGAGAAAAACCTACTCATGAAGTCCACTTGAATTTTTTAAATGCACTTGTATAATAATTAATTAATTCTTACCACACTCTGCACATTACAAGTGGTACACCATTTTTTGGTAATACACGTTTGTATCATATTATTTTCTACCGCATTTCACCATATTATTTCCTACCACATCTCGTGCATCGCACGGGTGACTGTCCTAGTAATACCTATTCATGAAGTCTTTATGTTGACAATGAAATTTGAACCCAAATCCTATTGAGAATTTGAGATATATATTCTTTGTTATTATTTTGGACAAAATATATTCAAGGCTTAATTACAGTTTTGGTCCCTCTATTATGATCAACTCACGATTTTGGTCCCCAAAGTTTTAATTTAACGATTTTAATCCCCCTATTTTCCAAATTTGTAAAATCAAGGTCCCCCTCTTAATTTGGTCAAAATTAAAACTGACTTTGACTTTCAATCCTACGTGGCAGCCCACGTAGACTGCCACGTAGGCAGCACTGTTCATCTCTCTCTCTCACAGCACTGTTCCTCTTTCTTCCTCCCTCACCCCTCCTCTTCCTTTCCCTCCGCCAGCCACCAACCACCACCACCCACCACCCACCTCACAATCTGTCTCTCTCTCCTTTCTCTCTCACCGTCACCACCCACAGCCACCACCCACCTCTGCGACCTCCGTGAACCCCTCCCCCTCCTCTACGATCTGGATCTGAACGGCGAGAGAGGGAGAGCGACGAGAGAGAAAGGAGAGAGAGAGCGACGAGAGAGGGAGAGCGACGAGAGAGAGAACGGCGAGAGAAGGGGGAGGGGAGAGCGAACCAGAGGGGGGGAGAGATGCGAAGGGGAAGGGGAAAACGAGGGGGGGAGGTGCGAATAGAGAGAGAACGACGGGGGGGGGGGGGAGATGCGAAGAGGAGGATCGGTGAGGGCGGAGGGGAGGTGCGAAGGGGAAGGGGAAAACGAGGGGGGGAGAGATGCGAAGGGGGGAGGGGTTCAGGAGGGGGGAGGGGGTCACGGTGGGGGAGGGGAGGGGGCTGTGAGAGAGAGGAGAGGGCTGTGAGAGAGAGAGAGATGAACAGTGCTGCCTACGTGGCAGTCTACGTGGACTGCCACGTAGGATTGAAAGTCAAAGTCAGTTTTAATTTTGACCAAATTAAGAGGGGGACCTTGATTTTACAAATTGGAAAAATAGGGGGATCAAAATCGTCCAATTAAAACTTTGGGGACTAAAGTCATAATAGGGGGACCAAAACTGTAATTAAGTCTATATTCAATGATATATTGGTTCTGTTTATCTGCGAGTGTAAATGAGATAAATATTTCTTCTAGTCTCAAATATAGCAAACAAATTATTAGAAAATGAAGAAATTAATTTTCTTAGAACGTAGAAATTGCTAAAACGTAAAACCAAACCCTTGATTTTTTTTTGGGCAATAGGACCTCAATCTTGTTTTTGACAGCAGACCCTCGATGTTGATTATTAACGAAGTGGGCTGTTTTTTTCTTCAAGAAAGATGTTAAAGAAGTGGGCTTTAAGCCCAATCGTTCTTCCTTCTCTAACCTAGAGAACCTGGAGATATCTGCAACTGCAAGTCTGCAACACAGAAATGCCGCATAAGAAGTTTTGGCATCTACGCTCTTGAGCAGGCTAGCCACTTCAAAATTTGAATTCCCCG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF13621.9	Cupin_8	213	414	2.60E-20

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT1
Epigenetic Regulators	JMJ22

Gene Ontology

GO term	Description	Category
GO:0010099	regulation of photomorphogenesis	Biological Process
GO:0010114	response to red light	Biological Process
GO:0010476	gibberellin mediated signaling pathway	Biological Process
GO:0016740	transferase activity	Molecular Function
GO:0040029	epigenetic regulation of gene expression	Biological Process

InterPro

InterPro term	Description
IPR003347	JmjC domain
IPR036047	F-box-like domain superfamily
IPR001810	F-box domain
IPR041667	Cupin-like domain 8

trEMBL

trEMBL term	Description
A0AAN9IR64	_

SwissProt

SwissProt term	Description
JMJ22_ARATH	Arginine-specific demethylase JMJ22

KEGG

KO	Description	Enzyme
K11323	histone arginine demethylase JMJD6	[EC: 1.14.11.-]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G06550	Jumonji domain-containing protein 22
Medicago sativa L.	MsG0780041222.01.T01	_
Oryza sativa L.	LOC_Os11g36450.1	OsFBO15 - F-box and other domain containing protein, expressed
Cucumis sativus L.	Csa002497	_
Glycyrrhiza uralensis Fisch.	Glyur000170s00010997.1	_
Codonopsis lanceolata	Cl_chr04_54740T	_
Arachis hypogaea L.	AH16G43880.1	F-box protein At5g06550 like

Expression pattern