Gene detail

Detail information of Am03G014200.1 Annotation

Gene ID	Annotation
Am03G014200.1	K-box region and MADS-box transcription factor family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G014200.1	mRNA	Chr03	38715326	38717512	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM03G014200.1
AATCCTTAGCGGGGAGCTCGGGTTCTCAGTTCGGGGGAATTGAGATTTGCTATTTGAAGTTGCCTGTTTGTAAAACATTCTTCATATAGTGGTTGTCAGCAAAGTCCAAAGGTTGCAAAGCCGGAGGCCGAGGACGTAGGGCTTTTATCCCGAACCTCGTAAAATTCCTGGTGTATCTCTATCCCTCTCTCTTTACTTTATTTACTGTTTATATCTGTTTATAATTATACTCAATATCACTGCGCCGATCTGTTTATTGCTATCATTACGCTGCTTATAATATCTGTCTATCCTGAACTCTGATAATAGCGTAATATTGCACTGTACCTGATCTGCCTGTTTAGTTATAAATGTCTGGTTATAGTGAATATTGAAAATAGTAACATTAGAGTAATATCTCACTGTGCCTAATCTGCCTGCTTACATACATCATATAAGTTTAAATCTCAGATTCCGCATTTGATTTAAACAAGCATTGCAAAAGTTTTTGAAAACCGAAAAAGAATTCAAGTTTTGCACATAACCTTATTCACCCCCCTCTAAGGTTATCATACAGTCCAACACCATATACATCTTGTAACCTACTGTGCTTCGTGTCCGCCTCAACCCCTACCCTTGTCCATCCTCCGACCACAACCCCATCTTCTCCTCCATGGTTTTCCTGATGCTCAATCGATCTCTGAATGTCCGAACTCCTCTCTCCTCGATCTCACTGGTGCCTCCGCTGTAGATTTGGTGGTTTCGCGGCCTCCACTAGAGCCACCGCCACCACCAAAAGAGGATGATTGGAAAGGAACACCTGCTCCCTCACGATCGTCGTTTCTCTGGTCAGGTATGACTCATCTTCTCTCTGATCGTTTGGCTCCTGTCAGATCACCACCTAAGCCACCATGGATTCACCATGATTTCCCCACCTTGTTGGCTTCAAACTCGTATCTCTGGTGGATTTGTGGAAACCTGTTTCATGTTTTGAGTTTCAGTCTGTTTTGCTCTTTGATGAAATTCCCCAAAGAACCTCTGGCTACCTAAGCACTTGGTTGTGGACATTAGTGCAACTTGTGGTGATTGTGAATGTTGTTTCTGTCTGTGCTATTGTTGGTTTTCCACTTCTAGGTGTTGTATGCTTCATTGAATATTCTGCTAGTTCAAGGTTTTATTGGATTAGAGTTGTGTCACTAGTGACCTTTGTTCTGCCCCTAGACCTTATGTTGTCTCGGAATGACAGTTGCTGTGCAGGAACATGGATGAACACCAACGACATCAGCTACCCCTATCACCGACAAGTTGATATCGCTACTATGGTAAATCTGGACCACCGTGAGACCACGCATAGTCGAACCGTGCATATCTCAGCTAAAGAAATGATCCGTAACTGGATAGATTTAAAGATTGTGGATTCTCCTTCAATTCTGGCCATTTATCATATGCGAAATCTGTTTGATTGGTTGATCGGATTAGTTGTTAGATTTGATGTGAAACCTTTGTGTTATGCTCTCTATTTGTGTAGTGAGGCCTTTGCATTGTATTGTCTAATAGCTAGGAGCAACTCTAATTCGTGGATGGGGTATGTCCCAACACTGAATGATTATTTGATTGTAATGTTCTGGTTTTCATCTAATGAATGAATGCATGTATTTGCCATAAAAAAAAGGATCGAAAACTTGGGGTGTTACAGAAAATGACTTATTTTTTTTAAAAAAAAAACATTCTTAGTAAATGAAGCTACTCAAAACAGTCAGTTGAAGCAGTTTTTAGATTATTTTTAAATTTTTATTTTTTTTAAAAAAACGGTAACAAACAGATGAAAAACTTCTAAAATAAAATATTTAAAAAATACTAATTATTCTTCAAAATAAGCCGTAACAAACAGATCCATATTAAACACCAAAACTATTGAATTCCTGCTTTTCTAACGGAATTAATTATACTTGTATTAGAATCAATTTTACCAACCTGTGATTTTACCACTCAACCACTAACGGTGATTCTCAATTATATTGACTTTACTTTTTCTTTCAGAATTGACAATGGATTGCACAAAATTTAAGCAATCAAGCACTAATGGAACTCATTTAATTTTTAACCAATAAAAAAGTATGCTGCAAATTGATTTTGAAGTTTGATTTGTACCTAAATATATGACAATGAACTTGTTTGGAAGCACGTTATGCACTGAAGATATAGCTCATCCACTCTTGTTTAATTTAGTTTGTCATGTCATGCAGTCTTCCGGCCATAGCTAGTGATTTGAGGGTTGTGGTTTCTACCAACCAAAACTTACGTGCAGACCTTTCAAATCAAAGGTTGTAACAACAACAACAACAACAATTGCTTGTTATCCCAAACTCCAAATCATGTTACATAACTTTGGTCTCCATTTTGATAGATATGAACACTTCTCCTTTCCATTGTAATTGGAACATTTTGAATTGTTTTTTCCTACATCTTTGCATATTACTTTATTAAGCTTTATTCCTTTTCTCACAAATGGGAATAATAATTTCTTTTCCTTTTGATTTGATGGTTATGCGGCCGCGACACCTTCACTTGTTATGTTACCCATCACATTCAAACCCTAGCTAGAAAAAGTTAATCACAGACATCAATACAACCCAAACACCAATATAACCTTGTTTTACATTACACCCTAAAATTCTACATAAATAAATGGAAAAATGTCCTATAAACTATATTCTAATTATATTAAATGAGACAGCTGAAAGATGCATAAAGAAACCAAGGGTTAAGAAAATGGATTCAAAAACAAAGCAAAATATTAAACATAAAATAAAATAAGTACTATTGAATTGGCTTTATCACAAACCCTTAAAGAAATTTCTGTGCCACTCAGAAAGTTTTTCAACCACTAACCCAAAATGGAAATGGCTATGTTTATTGCTTTTCTTGCTTTCTATATACTCTTAATAATTCTCACATATTAAGAACACAAAAAGATAGAAAGAAAGGAGCGTGAAGAAGAAGATTGTGAAAGAGAGAGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00319.21	SRF-TF	10	57	1.70E-22
PF01486.20	K-box	81	161	1.70E-19

Gene family

Gene family	Subfamily
Transcription Factors Family	Others
Epigenetic Regulators	FLCP12

Gene Ontology

GO term	Description	Category
GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Molecular Function
GO:0005634	nucleus	Cellular Component
GO:0046983	protein dimerization activity	Molecular Function
GO:0000987	cis-regulatory region sequence-specific DNA binding	Molecular Function
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function

InterPro

InterPro term	Description
IPR036879	Transcription factor, MADS-box superfamily
IPR002100	Transcription factor, MADS-box
IPR002487	Transcription factor, K-box
IPR033896	MADS MEF2-like

trEMBL

trEMBL term	Description
A0AAN9MET4	_

SwissProt

SwissProt term	Description
MADS9_VITVI	Agamous-like MADS-box protein MADS9

KEGG

KO	Description	Enzyme
K09264	MADS-box transcription factor, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G20240	K-box region and MADS-box transcription factor family protein
Medicago sativa L.	MsG0180001058.01.T01	_
Oryza sativa L.	LOC_Os05g34940.2	OsMADS4 - MADS-box family gene with MIKCc type-box, expressed
Cucumis sativus L.	Csa011135	_
Glycyrrhiza uralensis Fisch.	Glyur000331s00020710.1	_
Codonopsis lanceolata	Cl_chr02_55280T	_
Arachis hypogaea L.	AH17G29780.1	Floral homeotic protein PMADS 2 like

Expression pattern