Gene detail

Detail information of Am03G014060.1 Annotation

Gene ID	Annotation
Am03G014060.1	gibberellin 20 oxidase 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G014060.1	mRNA	Chr03	38362329	38371391	-

Sequences

CDS:

>Am03G014060.1
ATGGATTCAGGTCAATTGTTGTCTGAACTTCAGGTGCAACCTCACGTGCCAGCCAATTTCGTTTGGCCAAAGGAGTATCTAGAGGATGCTCATGAAGAGCTCCAAGCTCCAATGATAGACCTTGGTGGATTTCTCAGAGGGGAAGATGAGGCCACACAACATGCTGCTAAGCTCATAAACGAGGCTTGTTTGAATCATGGTTTTTTCCAAGTTACCAACCATGGTGTTGATTCACATCTTATTAGCAAAGCTTATGATCAAATGGACACTATCTTTAATCTCCCAATTTGTAGGAAATTGAGTGTTCACAAGAGACCAGGTTCCATGTGGGGTTATTGTGGTGCTCATGCTGACCGGTTCTCCTCAAAGTTGCCATGGAAGGAGACCTTCTCTTTCCCCTACCATGACAACACTTTAGAGCCTGTTGTCACTAACTACTTCAAATCCACCTTAGGGGAAGATTTTGAACAAACTGGAGTGACATTGGAGAAGTACTGTAAGGCGATGAAACAGTTAGGGATGAAGCTGATGGAGCTATTGGCCATAAGCTTAGGAGTGGATCGGTTAGATTACAGGGAGTTGTTTGAAGATGGGTGCTCAATCATGAGATGCAACAATTACCCATGTTGTAAGCAACCAGGACTTGTACTCGGGACTGGACCACACTGTGATCCAACTTCTATAACCATACTTCATCAAGATCAAGTTGGAGGACTTGATGTATTTGCAGACAATAGGTGGCAGACAGTTCGACCTCATCCTAACGCCCTAGTAGTTAATATTGGAGATACCTTTAAGGCATTATCAAATGGAAGATACAAGAGTTGCCTTCATAGGGCAGTGGTTAACCAGTACAAGGAGAGAAAGTCCTTGGCATTCTTTCTATGCCCCAAAGAAGACAAAATGGTGAGGCCCCCAGAAGATATCATTCGCAGGGATGGGACGAAACAGTATCCCGATTTTACATGGTCAAATTTACTGGAATTCACACAAAAGTACTACAGAGCTGATGAAGCCACACTGTCAAATTTCACCAACTGGTTGCTATCCTCCAAACCACAAACTTTACGTTAA

Protein:

Promoter(3k):

>AM03G014060.1
GTAGCTCACTATTGTTATACATACCATTTGTATCAAAATCTTCAAGCCAGCCAGGAGGTCTAATTTGTCTCTTGTTCCTATTCTGAGCAATTGAGCTACTTTCTGGTGCATCTCCTATGGTATCTCCAGAAGCTTCAGTTTGAGTTTCTGGTGTTGATGAGTCTTCCCTTAATTCAGGTCCAGTTGTTTCTAGTGATACATCTTCTGTTTGTTCATCTACAATATCATCATCATCTTGTAGAATTTGTTTCTCTACTGTTTTACTGCCTTTTTCCCATTCCCAGGCTTCATTCTCAGAGAAGACCACATCTCTGCTGGTTACTATCTTCTTAGTTACAGGATCATCCAATCTATACCCTTTTGATTCTTCACTAATTCCCAGAAAAACACACTTGATGCTCTTATCATCTAGTTTTTTTTCTTTGCGCATCAGGTACATGCACATGAGCAACACACCAAAATACCTTGAAGTGGTGTACATAGGGCTTAACACTGCTCCAAGCTTCCTCTGGAGTTATGTTTTTCACAGAGAAGCTAGGACTCTTATTTAACACATAATTGGCCCAATTCATAGCTTCTGGCCAAAACACCTTTTGGACACATCTACCAGATAACATGCTTCTAACTAGGTTCATGAGAGTCCTGTTCTTTCTCTCAGCTACCCCATTCTGTTGGGGAGTATATGCAGTGGTCAGTTACCTTTTAATTCCGTTTTCCTCACAATTGAATTCACCTCCTCTATCAGTTCTAAGGCAACAAATAGCATTACCAGATTGTTTTTCAACTACAACTTTGAACTTCTTAAAACAATCTAAGGCAGTAGATTTTTCAACCAAGAAGTATATCCATGTTTTTCTACTTAAGTCATCTATGAAAGTGGGAAAATGCCTCTTCCCTCCACTTGACTCTGGCTTGATTGGCCCACAGATATCAGCATGGATCAATTCAAGTGTCTTGGATGCTCTCCAAGTAGCAGACTTTGGGAATGACTCTGTGTTGCTTCCCCTTCATACAATCAGTGCATACCTCTGTCTCCATTATTTCTGGCAGCCCTTTCACCATGTTCTTTTGACTTAGTAAACTCAATCCCTTCATACTCAAGTGAGAAAAACTCTGGTGCCACAGTTTGGTGGTGTCCTCAGTGCTAATTTTCAAACATTCAGGTAGTACAGGGGTTGCTTCCACAACAAACAGCTTGTTTGCTGCCATCTTAGATGATATAACTAGACCCCATTTCTTATGATGTACATTGTATTCATCATTTTCAAACACCACAGTCACGCCTTTATGTTGAAGTTGCCCTATGCTAAGCAAGTTATTCTTCAATTTAGGAATATAATAAACCGAGGTGATTACCTGAATTTTTCACTTAACTCTGATCTTCACACTTCCTTTGCCTTCCACAGCCATTCTTGAGCCATCTCCTATTTTGACTGATTCCTTGAACCCTTCATTAAGATCAAAGAACCACTCCTCGTGTCCACTCATATGGTTGCTGCAACCTGAGTCCAAGAACCAAGTTCTCTCTTGTTCTGTGCCCTTATCTTCACAACTAGCCATGAGAAGAATCTCTTCTTCATGTTCTGATCCTGCATAGTAAGCATTTTCTTCATTGTTAGGACACTCATATTGATAGTGTCCTAGTTTCTTGCACTTGCAGCATTGAATTTGCTCCTTGTTAACATTCTTCCTTCCACGACCCCTTTCACCTCTTCCTGCTCCTCTACCGCTTCCTCTACCAGAATTATCTTGAGTAGTTGCCACCTTAAGAGCTTGCTCTTCTACTTTCTGAGTCTTCATCCTCTGTTCCTCTACAATCAAGCTGCTTTGTAGATCATCAATTGACATAACTGTGATGTCTCTAGATTGCTCAATAGAGCACACCATGTAATTGAATCTTGGAGGCATTGAACGCATTATCTTCTCAACAACCATACACTCGTCCAACTTTTCTCCGTGCATTGTCATTTTCATCACAATCGTCAACGTTCTTACAAAGAAATCGTTCACTGATTCTTCTTCTTTCATACCAAGAAGCTCGAATTCCCTGCGTAGAACTTGAAGCCGAGCCTTCTTTACCCTAGATGAACCCTCGTATTTCAATCTTAGCGAATCCCAAATCTCCTTTGCAGTATCCTTCTTCAAAATTGTCTGCAACAGATTCCTATCAAGCGCTTGAAACAAGTAGTTCTTAGCCTTGAGGTCCTTCAGCTTGTTTTTTTCAACCAATTTTATTTGTTCTTGCGTCGCCACCGTCGGTGCCTCCGGTAGAGTAGCAATTCCGTTCGCAACCACATTCCAGAAATCCTTCGATCGAAGAAGATTTTCCATTAGCAACGCCCAATGGTCGTAATGACCGTCGAATTTGGGAATAGCTACTTGAACGAAGTTACTGTTCTCCTTCTCCATCGTCTTCTCGAATCGCCTCGCCGTCGATTTCCTCACAAACACTCGTGTTTCGCTCTGTATCAAGCCCCGCGTGGAGCTCTGGTACTAGTTTGTTAGGGATAAAACTGAATTGTGTATTGCTTCATTGATGATTTGGCTATTAAAAAGCTCACGGTTACAACTGAAATGAGTTTCAATCAACAACTAACTTTACCAAGCTTGTCAATAATCAGATACAAGTTGGTACACAATACTAACAGTGGACTATGCAGTACAAAATTACAAAAAAGCCCCTAATACAGAATTACAAAACTAACACCTTTACAATGAGCTATTATTATGTTTACCTTTAAAAAAAAATTCCAAGGGAATTTGAACTTATGGGAAAGTTGTGTTATTTTACAAGAAATGACTCAACTAGAAGATATTATCGTTGATTGCAGGCTAGCTAATGATTATTCTATCTCTTCGTCTCTATGAACAGTTAAATAAATACACGTGTGATATACATTGCCGATTGCCCTATATATGTGCTCTGTCTCCTACTTAATCATTTATTTGTGTTGGTGTTAAGAGTTCCTTCCTTAACTTGATCAAATTAACGTGAGATCG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03171.23	2OG-FeII_Oxy	201	297	1.90E-26
PF14226.9	DIOX_N	37	138	9.90E-22

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0046872	metal ion binding	Molecular Function
GO:0047927	gibberellin-44 dioxygenase activity	Molecular Function
GO:0009899	ent-kaurene synthase activity	Molecular Function
GO:0016707	gibberellin 3-beta-dioxygenase activity	Molecular Function
GO:0009416	response to light stimulus	Biological Process

InterPro

InterPro term	Description
IPR005123	Oxoglutarate/iron-dependent dioxygenase
IPR026992	Non-haem dioxygenase N-terminal domain
IPR044861	Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain
IPR027443	Isopenicillin N synthase-like superfamily

trEMBL

trEMBL term	Description
A0A072V0R4	_

SwissProt

SwissProt term	Description
GAOX2_ARATH	Gibberellin 20 oxidase 2

KEGG

KO	Description	Enzyme
K05282	gibberellin-44 dioxygenase	[EC: 1.14.11.12]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G51810	gibberellin 20 oxidase 2
Medicago sativa L.	MsG0180004530.01.T01	_
Oryza sativa L.	LOC_Os01g66100.1	gibberellin 20 oxidase 2, putative, expressed
Cucumis sativus L.	Csa013047	_
Glycyrrhiza uralensis Fisch.	Glyur001070s00024976.1	_
Codonopsis lanceolata	Cl_chr02_55440T	_
Arachis hypogaea L.	AH17G29540.1	Gibberellin 20 oxidase 2 like

Expression pattern