Gene detail

Detail information of Am03G013440.1 Annotation

Gene ID	Annotation
Am03G013440.1	ubiquitin-conjugating enzyme 10

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G013440.1	mRNA	Chr03	36854977	36857269	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM03G013440.1
CAATAGACAAAAGCACCAATGATTCTGATTCAATTAAAAAGCAAACAAACTAATGATCAATAGAAAACTTAATGATTCAAATTAATGATTCTGATTCAATTAAAAAGCAAACAAACTTCCATTAATAACTTGATTCAAATTACAAACACTAATGATCAATAGAAAACTTAACCAACAACAAATCCTAGGACACTAATTTCCATTAACCCAAACAACATAAACAGCAAACACAACCCATGATACAATCAAGACAAATTGAACCCCTTGAAACCTAGATGTAAGCCCCTTAACCCTTTCCCTCTCATTTGCTAATTTTGTCTTCAGCTTTTCTTTCTCTTTGGTGCTTGCTTCAATTAACTGCTCAGCATAATGACAAGCTTTGCAGCTTTGAATTTCATGGGAGCTTGCTTCCGTTGAAGGAGAATCCATGAGAGTTGTAAAACGTGGTTCACTTACTTCATCATCCCACACAAATAATTTGCAACTGTCTTTTAACTTCTACAATGGAAAATACACAGTTACAGTTTTAAAGTGAGAGGAACAACAATGAATATTACATATAGTTAACAACATACCCAGTGGAGGCACTTCCAATAGGGGCGTCCTGGGTTTTGTGTAGATCCAGAAATGTAGAACTTCATCGTATTCCTACATGGACAAACTGGAAATCGTCTTCTGCGAATTGGTGCATTTGATGAAGAACCTTCACTGCGTATTCATGGAGAAGAGAAGAGAAGAGAAGAGATGAACAGAAACGAATGGAGAAGAGAAACGAAGGGAAGAAGAGAAACGAAGGGAAGAAGAAGAAGTAACTTGGGAATAAGAGAAACGAATGGAAGAAGAAGAAGTAACATTGGAAGAAGAGAAACAGTGAAGTATCAGAGAAACGAAGGGAAGAAGAAGAAACGAATGGGAAGAAGAAGTAACTATGTAGGGTTTTCTAGGACACGTGGCAAACCAATTTGGCAATTAAAAATGCCAACTCACATAGTTCACTGACACGTAAACACAGTTGTAACAGAGGAACAAACAGAAGGGCTAACGCCAAAATGGTGACATTTGCAAGGTGTTTTTTAAAAAAAAAATTTGCAGGGGGTAAAAGCAAAACACTCCATATTTGCAGAGGGTAAAAACGTATTTAAACCTACATAAAAATTATCCAATCAACTCGTCCGTGACTGATTTGTCGCAATGACGGAAATGACGTTTATGGACACCTGATTGTCGGGTTCGACCCCCTGAGTGTCAAGGCTTGGTTTTCCCGTTTGTATGTATTAGGTCCCGATGCTTGCCAGTTCGACCATCGGACCCAAAAAAATTATCCAATCAACCCAGGAATCATAATCCACCAACAACTCATAGATGCTTCAGTCATGTGAATTTGGACTTTTAAAGTGCACCGGCTGAAAATACTTCTTTGTAGATTTCTTTACACATGCTTAAAGAACTCATGAACACATCGTACTTCCTTCTTTAATAGCACTTGTCCTCAAATTCTCATACTATTATCCTTCAAATGAAAACATTGACCATTTTTTTTTGTGTACGTCTTTTTTTGTGAGTGCCTCCAAAACCAATATTGATCGTCAAAAAAGTTTTGCTTTCTCAAATCATTGTTCTTTTCTGCATCTATCGTTCAACAACTTTGCAATCCCAAATATATTTTAAGGAAGCTCTTAGAGTTAAAATAGTGGAAACTCGAACATGACCTGAATATGTTTTTTCCATGTGCTCAAGTCAGCCTATCATTCCCCTCCTCTTGAAATGGATTTTCCCTCAAATCCAAACCTACATAAAAATGTAGCAGGTTATGTTAAAATGCTTCTCCTTTTCGCTCTCCACCATCGTTTTCCAATTTGAATCTTTCTACATCCTTCTTCTCCATCAATTTGCCTATCACATGGTATGAACAACTTTATATTTAATGACATTCGCAGGAGGCAACCTGTGTTTTATTTTTAGTTATTTTTACACGCCTGACTTCTAAAGTCTACTTTTTTCCCTATTTGTTCACTTTAGAAGTCAGACGTGTATCCGCTTGACTTTAAAATTTGCGAGTTTTGCCTTTTAATTACAAGTTTGCCACCGCATCACTTATGCAGTCAGACATCTGAGCGCCTGACTTTAAATGTCTAATCACTCTTAATTGGTTGAAAAAGTAAAATTGTTTTTGTCAGAGGGTATATAAGTCAAATTCAATTTGACCGTTGTAATCTCGTAATAGATTCAAATATAGCCGTTGGATTTTTTACAATTTAGAGTTTTTAAAATCGGCAAATGGAATTAAAAGGCTAACAATTAAAAAACAAATATAAAAACCAAGAGGCTGCCGGCAGGTCCGGCACGGTGACCAAACGCGGGAAAATAAATATTTTGACGGACGTTATTTGCTCACTTTCATTCACTGAAACGAACGACGTCGTGGAACGAGATGATTGATTAACGAATCAATAACGTGGTGTATGTATCTCCGGAGCGCGAAGAAAGACCGTTCCTTTTTGGCTGCGATATTTTGACCCCGTTAGAAAAAGAGGATAGGATTTGGTACAAAAAACGCGAAGTAGGGCCCCCCACACACCCCCCTTTCGGAAAATTAATAATAAAAGAAGGGAAAAAACAATAATAGGAATGGCGCAGTAATAATAATAGAAAGAGAAGAGAATACATAAAAAGGAAAGTGAAAGGAAAGGAAGGGAGGAGGAAGGGAAGGAGAGAAAAAGAGTGGATCGATTCTTCACCCGCGCCATACATTTATATAACATCTTTTCTTCTCCCAATTCCTTACCCTTTCTTTCTCTCTTGTTGTTCTTCCTCCACCTCACAATCACAACAATAACCCAAGCAAAGCAAAAGAAAAAGGAAGATCTCTGTTAATTCCATCTTACCTCGAGAAAAGGTAGGTACGTATGAGGATCTGTTGATCTATTCGTATTTTGTTTAACTTTATGCTCTGATCTGATCCGATCTGACTTGATTTTTGATCGTTGTTAGGTTTTCACG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00179.29	UQ_con	5	141	3.30E-54

Gene family

Gene family	Subfamily
Ubiquitin Family	UBC

Gene Ontology

GO term	Description	Category
GO:0004842	ubiquitin-protein transferase activity	Molecular Function
GO:0006511	ubiquitin-dependent protein catabolic process	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0000209	protein polyubiquitination	Biological Process

InterPro

InterPro term	Description
IPR016135	Ubiquitin-conjugating enzyme/RWD-like
IPR023313	Ubiquitin-conjugating enzyme, active site
IPR000608	Ubiquitin-conjugating enzyme E2

trEMBL

trEMBL term	Description
A0AAD5NPE4	_

SwissProt

SwissProt term	Description
UBC10_ARATH	Ubiquitin-conjugating enzyme E2 10

KEGG

KO	Description	Enzyme
K06689	ubiquitin-conjugating enzyme E2 D	[EC: 2.3.2.23]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G53300	ubiquitin-conjugating enzyme 10
Medicago sativa L.	MsG0380015056.01.T01	_
Oryza sativa L.	LOC_Os02g16040.1	ubiquitin-conjugating enzyme, putative, expressed
Cucumis sativus L.	Csa019968	_
Glycyrrhiza uralensis Fisch.	Glyur000376s00018680.1	_
Codonopsis lanceolata	Cl_chr03_52940T	_
Arachis hypogaea L.	AH17G28510.1	Ubiquitin-conjugating enzyme E2 10 like

Expression pattern