| Gene ID | Annotation |
|---|---|
| Am03G012890.1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am03G012890.1 | mRNA | Chr03 | 34862793 | 34867391 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13424.9 | TPR_12 | 182 | 253 | 1.40E-51 |
| PF13424.9 | TPR_12 | 268 | 337 | 1.40E-51 |
| PF13424.9 | TPR_12 | 351 | 422 | 1.40E-51 |
| PF17874.4 | TPR_MalT | 175 | 455 | 1.10E-16 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0003677 | DNA binding | Molecular Function |
| GO:0031425 | chloroplast RNA processing | Biological Process |
| GO:0042793 | plastid transcription | Biological Process |
| GO:0000428 | DNA-directed RNA polymerase complex | Cellular Component |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR019734 | Tetratricopeptide repeat |
| IPR041617 | MalT-like TPR region |
| trEMBL term | Description |
|---|---|
| G7J7G9 | _ |
| SwissProt term | Description |
|---|---|
| NPHP3_XENLA | Nephrocystin-3 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G53080 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Medicago sativa L. | MsG0380016540.01.T01 | _ |
| Oryza sativa L. | LOC_Os02g47880.2 | tetratricopeptide repeat domain containing protein, expressed |
| Cucumis sativus L. | Csa015357 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000326s00025787.1 | _ |
| Codonopsis lanceolata | Cl_chr03_52180T | _ |
| Arachis hypogaea L. | AH11G14270.1 | Nephrocystin-3 like |