Gene detail

Detail information of Am03G012230.1 Annotation

Gene ID	Annotation
Am03G012230.1	pseudo-response regulator 5

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G012230.1	mRNA	Chr03	33097812	33102157	-

Sequences

CDS:

>Am03G012230.1
ATGGGTGAGGCAGTGATGAGTGGTGAGAAATTAGTGGGAATTGAGAAGGAGGAGAGTGGAACTGAAAGCAGAGGAGGTGAATTGAAAGGGCTTATGAGGTGGGAGAAGTTCTTGCCCAAAATGGTTTTGAGAGTGCTCTTGGTTGAAGCTGATGATTCCACTAGACAGATTATAGCAGCGCTTCTCAGAAAATGCAGCTATAAAGTTGCTGCTGTTCCTGATGGCTTGAAGGCATGGGAAATACTCAAGGGAAGACCAGGCGGTTTCGATCTAATACTTACAGAGGTGGATTTGCCATCCATATCTGGCTATGCACTTCTCACACTAATTATGGAGCATGAGATTTGTAAAAGCATCCCTGTCATAATGATGTCCTCGCACGATTCAATTAACACAGTCTACAAATGCATGTTGGGAGGTGCTGTTGACTATCTTGTTAAGCCCCTTAGAAAAAATGAACTGAGGAATTTGTGGCAGCATGTTTGGAGAAGACAAGCAGCAGCCGCTGGCATAAATGGTCCTCAAGATGAGAGTGACGCACAGCAGAAGGTTGAGGCCACTGCTGAAAACAATGCTGCTAGTAATCGTTCTGGTGGTGATGCTGCTTGCATTCAAAGAAATAAGGAATTAATTGAGAAAGGAAGTGACGCGCAGAGCTCTTGTACAAAGCCCAACATGGAACCTGAGAGTGGCCTGGTTGATAATGTCCATGAATTTTCTCCACTGAAATGTGGTGAAGCATATTCAAATGGAATAAAGACACAAGAATTTCATTTGGACTCGACATTGATCTCACGTGATGGTCATGCTAAAGGATTAACTGTGGCTATCCGCAAAAATGTTGATACAAGCACAACTAATGCCAAGGATGGTGATGGTCCAGAGCATTTTCAGAGTGCTAGCATCAATGGTGAGGCTCATGACAATCACTGTGTTCAAATTAACTCTTCTAAGGAAGCTATTGACTTGATTGGAGCATTTCATAACCCTCCAAACTGCAGTCTCAAAAGCTCCACAGTTAATTGCACAGGCGGGTTTGACTATTCTCCGCAATTGGATCTTTCTCTAAGAAGCAGCAACTGTGAGAAGGAACTCACTGAAGAAAGGCACACCCTCATGCATTCTAATGCTTCAGCTTTCAAGCGGTATACTAACCGGCAATTACAAGTGTCACCTGCAATAATAATTAACTTCTCTGATCAACAAAGAGAACAACAAACAAACTGTGAGAAGGTTGTCCCTCATATGGCAACTGGATGCAACTCGGAGAGTTCAATACCAAGTATGCAAAGATGTATTGTCTCTCCAACCACAGCCCAATCAAAAGAACCTGAACTTGCAACTTCACCTACCCAGCAACAACATTCTCTCCCAATTCCTGTAAAAGGTGTAAGGCTCAATGATCTACGCATGGCCTACGGTTCTGTACTTCCTCCAATGATTCGTACACAGTCAGGTCCACCATCAATGCCAGGTTCATTTGTGCTCCTTGAACCAAACTTTCAAACAGATGCATTTTATCAGTCAAATGTACAAGAAAATCGTTCAGAGCAACCAAACGGAAACAGCACGTCAAACCAAATTGTGTACACACACGAACACAGGTCGGAACATTATGGACGTCACGGCCAAAACGGAAACAGCACCTCAAACCAAGTTGTGTACACACAGGAACGCAAGTCGGAACATGCAGAAGAGCGAGGATTTAATTATCCCACAAATGATCAAAGTACATCAAGTAGTTTCTGTAATGGAAATGCAAGCCATCTTAACGGCATTGGTTATGGAAGCAATTGTGGAAGTAGCAGCAATGTTGAGGATAAGAATGAAGACTTCACAAACAGTGGATATTCTCATCGTTCTATCCGAAGAGAAGCGGCTCTAAACAAGTTCCGCTTGAAACGGAAAGAGAGATGTTTTGAGAAAAAGGTTCGATATGAGAGCAGGAAGAAACTAGCAGAGCAGCGTCCAAGAGTGAAAGGACAATTTGTTCGTCAATTGCAATCTGATTCTCTTGCTACCGAAAAAGATTGCAATGAATACAATCATTAG

Protein:

Promoter(3k):

>AM03G012230.1
GGCCTGTGCAAAATATTAGGCTAACCACACCGATTTAAAGAATTGGACCAGACCACGCCAAAAAAGCCCAATCCAAATTAAATGGTTAGTAAACTGCACCTAATAATAAAAGTGGGTCGGGGCTCCAAGTTAGATTGAGTTAGATTGCTAAATCCGATTTGTAACCAGATGAAGATGGTATCAGTGGTCGCTTTTTTAATACAGTGTCGGTCTATGGAGCCCCGATACTTCAAAAATGGAGACGTACCCGTGTCGGATACGTATCCGATACCGATACGCACCTGATACTTCCCGATACGTACCCAAAGAGTATCTAATAATTTTTTAATTCTTTTTAAAAAATATTTGACTCGATAAGTGTGAAAGCGGCGAGTTTGAAAGGAAAGTGAGAGAGTGAGAAGTGTGAAAGGAAAGTGAGAGAGTGAGAAGTGGTCAGAAACGTGTTTGTTAGCGATTGATTTAAAGTCCCTTGCTAAGTTCCTTAGCTAATTAGCTGATTTTTTTATAGTGGTAGATTGCCCATAGCTCGACTTCCAGGGTTGAGCATGGATCCAACTTGGCCATGTTCATCTCTCAACAATCCTCCAATAGCCGTGATTGAACCTGATTGGAGGCGTAGTGTCACAGTTAAGGGTTAAGAAACCATTTAGGGGTTTACACCAAGATGCTGGTTTGGGTGTATAGGTATCCTTCTCGAGGGGTCGCAAGGAATTCTCTCTTTGAGTTGCGTCTAGGATGTCTTCAACTCTGCCTAGGGTTAGGCGAAGGAGATTATGAGAATTTACTTTAGCTTGGGCGAGAACGGAGAAGGAGGTGATTTTAACAAGGGGGCGGGGGTGGTAAGGGAGAAAAAGGGAAGAGAGACAGAGTTTAAGTACTTTTATGTTTGGATCGAGTTATTTTAATAGAGGGAAAGTGTAAATTTAATTTTTTCACACTTGAAATATTTAATGTCACACTAAATAAAATGATATTGAAGTCCAAATGGTAAATAGATACTCTCTCCTCTCCAAATCTCTCCACTTTTGGAGGGGACCTAAATTTGGCCTAGGAGGGATTTTGCTCTCATCCACTTCAAAAAATTGAACTAAACAACTAAAGTTTAAAATAATTTTTCTATTTCCCTCCCCCTCCATTCCCCTCAAACCGAACAGAAAAAATTACTATTCCCAGAAATTTAATAAAATATTAATTATTCTTAAATTAAAAGTTAAAAATTGAAAAACTCATAGAAAGGAGTGAGAAGTTATTGTTGGTTATTTGTTATTCCCACACTCTCTCTAATGAGAATATAAAATAGAGATTTATTGTGTAAAGTTTATTACCGTGAATTAATAATACCCGAGAAATATGAAAATATTGTATTCCAAATCCCACTTTTTCTCGAATATTTGTAGAAACCTTGAAACAAATGCAGGGTTTGTTTGGAAATGGGATTGGGAGTGTCTAGAGAGGAGAGTTTTGGAGGACTAAGTCTATATTTTAATACAAATTTGACATTTTTAAAATATTAAAGTAATTTGATTGATGTCGTGAACTTTAATAAATACTTTGTATTTTTATTACATTAGAGACTAAATAAGAGGTGGGGGTGTAAGTTAAACAATTTTGTGAACTAACCATTTTGATAATAATTTTTTTTGCACCCCTTAATCTAAGATCTTGAATATGCCACTAGTTATTATATGGATGACCCAGCACACCTGACAAAGTCGATATTAACAAGGTATACTTTTTTTGTGGTTACCCGAGTTGAATTCGAAATCTTTACTTTGCATGTTTGAGTTTATAGTGATACCCAACGTTAAACAATAATAATAGCTTTGAGTTAAAGAAACATTTCACACTGTACACATAACATGAGACCAAAAGAGTACTAAGTTTTTAATGTTTTGTTAAATAGATGCTTTCATAGAATATTGATTATCGACGGTTATGATTAACCTGAAACAAAACAAAAGAATTGACCCCCACTCATAATAAAATAACTTAAGTTGGGGACAAAATCAAAAAGCATTTGTAGATTAGTGGCGGAATTCGGAGATTGGAGTAGACTAGGACTATTTAGAATACTTAATTATCGGATGAGTGGTCTCTCTGTCTCTGATGGTAGCCAATGAGAAATTGCAAGGTGCACCTACGTTTATTTTTAGGTACCGCACCTTCCCACGCTCTTCACTCCACATCGAAGACGCACGCTCCTTCAGTCTTCTTGTTAGTGCCCGATAAGGAGCGAGTAACCAACACAGCCTCCCACCCACGCGTGTGAGTGGGATCCCTCATGCGTAGATAAGCATTTGACGACTTCAAAGCCACAAAACGAGCATCCCCAATGAACGTGCCACGTGTCTCAGCCTCGTCCATGGGATTTGTGGCAGCTTCAAAGCACTCAAAAATATCTTTGGGTTTTGGTTTAAATCTCAATATCTTTCTCCAAATGGGCCCCGGTGAGTGCCCATTGTCCCAAAAAAAATATCCCGGCAATAGCAAGCATATTTTGATATTTTGGGTTTGGACGGAACCGGAAGCAAAGAGAAAAATTATAACCAAAGAAAAAGAATAATAAAAAAGAAAAGAAAGAAAGAGGGAGAAAAAAGTTGAAATAATATCCACCACTAGACTAACACCAACCACGGGAACCCAATGGGTATTTCCCTTTAGATCTTTGGTCGAAAAAAAATCAGATCTAATTGATGACGTGGACCTTGCGGGCCAGCGCCTCTATGTCGCTAGATATTTTGAGGTTCGAGGATATTTTGTTTGGCCGTTGGATGAGAAGGCAGTTAACTTTGGTGTCTCATTCTAAACCGTTAGATGTAATACTGTTAAGTTACAATGTCCAGCCTTCCATAGTCCATATAATGACTTTTTCTTTTCTGATGCCTTTTTATTTCCACTCTCTATTTTGGATATTGTGTGCCGAGGTTTTGGTTTTCTCGAACCAACTAGGAAGAAGATTCTGATGCTATACGTTGATTCAAGGTACTAAAATTGAAAAAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00072.27	Response_reg	45	156	2.70E-21
PF06203.17	CCT	624	666	2.20E-17

Gene family

Gene family	Subfamily
Transcription Factors Family	Others

Gene Ontology

GO term	Description	Category
GO:0009736	cytokinin-activated signaling pathway	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0048511	rhythmic process	Biological Process
GO:0016020	membrane	Cellular Component
GO:0000160	phosphorelay signal transduction system	Biological Process

InterPro

InterPro term	Description
IPR045279	Two-component response regulator ARR-like
IPR001789	Signal transduction response regulator, receiver domain
IPR011006	CheY-like superfamily
IPR010402	CCT domain

trEMBL

trEMBL term	Description
A0A0B2QH41	_

SwissProt

SwissProt term	Description
PRR95_ORYSJ	Two-component response regulator-like PRR95

KEGG

KO	Description	Enzyme
K12130	pseudo-response regulator 5

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G24470	pseudo-response regulator 5
Medicago sativa L.	MsG0380016661.01.T01	_
Oryza sativa L.	LOC_Os09g36220.2	response regulator receiver domain containing protein, expressed
Cucumis sativus L.	Csa015341	_
Glycyrrhiza uralensis Fisch.	Glyur000015s00000787.1	_
Codonopsis lanceolata	Cl_chr02_51380T	_
Arachis hypogaea L.	AH20G22120.1	Two-component response regulator-like PRR95 like

Expression pattern