Gene detail

Detail information of Am03G011960.1 Annotation

Gene ID	Annotation
Am03G011960.1	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G011960.1	mRNA	Chr03	32367848	32373557	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM03G011960.1
CTCATAAACGCACGGGTCGTGCTCCCTGCAAAGAGTTTTTCAGCGAACAACAGCTTGGGGCGCACGGTCTGTGCTTAAATGGGCACGAGTCGTGCGCTTTTATCAGCATCACCAAAAATTTTGTTTTCGTGTAAAATTGCTATTCCAATCGATTCTGTTACTCATTCCGCTCCATTCCTAACTCAACCACACGAAGTAACCATACATTTAACCACTCAAACTACCAATTTCCAACAATCAAACATCAATATTTTACCAAATCATGAAAGTGGAATAACAAACCAAATTTATCTCAACAATATCAATTCAATGTTTCCCAAACTAACTTCAAAACTCTCAAACCATTTCAACAATCATAGAACACCAAAAAGGAAAAAGGTTTTCAACATACATCAACAACAATTTCAACCAAACCCATTATAAATCGAAGAACTCACCTTGAATGTAGGAATAACAACAACAAGCAAGGAAATCAAGATTTCAAAACACCAATCTCACTCCTAAGCTCCAATTTGGACCCAATCTTCAAATCCCTAATTTTTAGCTTCCAAAAACCCTAAGTTCAACCAACTTGATGATTTGAAGAAAAGGTTTTGTTGAACTATCAAGATGATGAGAAACCTAGTGGATGGGAAGATTCTTCAAGCTTTGATCTTCTTCTCTTCTTTCCTCTCACCCTCGAGTTCTCCTCTCTCTCCACTCACTCTTCTTTCCTTTTTTGCTTTCTTTTCTTTCTTTCTCTCGAGCTCTCTCTCCTCTCTTTCCTCAATTTCTTTCCTTTTATTTATTTTTGTGGATAATTGAGTGTGTGAGTGGTGTTAGTGTGTTGGGTATTGGAAATACCACTTATACCCTTATTCTTTCTCTTAATCACTAATTGATCCTAATTTCATGAAATCATTTAGTAATTAATACACTAATATACATAAATATTAATTTTAGGCAATCAATTAATAAAATTATCAATCAAGCATCATTGCCAAAATAATTAATTAGTTCAAGCATCAAAGTAATTAAAATAATTACTTTGGGATGTTACAGAGAGTGTGGTGGTGGGATTTAGGGATGAAGATGATTTATTTTTGTTGGCAAAAGTACATTTTGGTCTTTTATGTTTCATTAAAATTTCAGTTTGATCATTTATATTTTTTCCCAATCATTAATGTCAACTAAACAAGCGATGTCACATGTTAACCATTTGTTAACATTAGTGGATTAGTGGATGAAAAGTTAAAAAAATAACACTTTGACACATATTTGAAACATAAAGGACCAAAGTGAGGAAAAACCATAAATGAGCGGACTGAAATTTTGATGAAATATAAAGGACCAAAAGTGATTTTTTGTCAAACATAAATAGTTAGAACAAAAATTAAGATTGACAGATCTGAAGAGGTTGGTCTAGTAGAGCATGGCAAAGTGTCGTACCTCACAAGTCATGAGTTCGAATCCCCACTAATCCCTTTATGAGGAGGTAAAAAGCATGAAAAATTAGTTAAAATTAAGATATTCAATGTAAAAAAAGACATTACTAATTGAATTTGAATTATATATAAATTCGGTTATATTGCAGTTTTAGTCCCCAAGCTTTTTAGTTTGGCGAAAATAATCCTCACATGTACCTAAAAAATAATTTGGTTCTTCAACATTTATTAGCGAACTTAGTCCTTCTAAAATTAAAATATTGTGTCTGAGACCTATTTTATTGTATTTTTGGTCCCTCAAATTCTCAAATCAAAAGTAACAAAAATAATAAATTAGAAAGACAATAAATCCAATTTAAAAAAATATGGGACTTAGCAATATATTGATTCCGGAAAGTCTAAATTTGTCAAAAAAAAATTGGAGAATGATTTTCACCAAACTAAAAAACTTGAGAAAATAAATAAATTTTAGCAAATAAATTAAAAAAATCTCTTTCTTAACGATGAAAATTGATTTTTACTTTTTAGGTTTGATTATCATTTTTTGGGTTTTAGATTTCGTACCCTCTTTTCTACCCTATACCCCCATAATTGCCTAAATTCCCAAAATACCCCTCAACAAATTAAAAGAAAATTGATTTTTTTTAAATTTTCCGGAATTACCTCAAAAGAGGATAATTCCGGAAGCCAATTTTTTTGAGTTTTCCGGAATTATCTCAAAAGAGGTATTTCCGGTAGCAAAATTGGCTTCCGGAATTATCCTCTTTGGAGGTAATTCCGGAAAATGGGGTATAAAAGACTTCCGGAATTATGCCAAAACACATAACTCCAGAAGTCAAAAATTTGGCTTCCGGAATTATGTGTTTTGGCATAATTCCGGAAGTATCGTGTTTCACTACATTATTTACATGGTTTTAACCGATCTATAACTGAAATCGACACTTATTTACATAGTTTTAACCAATCTATGGATCATTTATTTTATAGTGTTTTAACCAATCTATAACTAAAATCGACAATTATTCACATGGTTTTAACCAATCTATGGATCACTTATTTTATAGTGTTTTAATCAATCTATAACTGAAATCGACACTTATTCAGATGGTTTTAACCAATATATGGATCACTTATTTTATAGTATTTTAAACAATCTATAACTGAACCAATCTATGGATCAATAGTTTTAGACATTGTTTTTGTTTTGTTTGTTGTAATGTGTTATTTTCGGTTAGAAAATATTTTTAATTAATAAAATAAATATTTAATTATTGTTCAATTCCAAAAGCACCATAATAATACGTATAAATCTGCAACTCAATTTATTGAATTTCCGGATCAACGCGCACGTTAATGAAAGAGCGCAAAGCGAACCGGTGAGTAGTGTACAAAAGCAGGCACCGCTTCGACTTTCCAGTTGAAAAAGACGCCTAGATGGCTTTTATTTTCATTTCTTTCTCGAATATTAATCAAGTGATAATTATAAAAGGGTGAAACCGTGAAAGTAAACGAAACATTATCAAAACAAAAGTATCTCTTACACTACATCCGATTTCATTGAGTTGCGGCGTTGAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02466.22	Tim17	52	174	8.80E-13
PF00536.33	SAM_1	205	254	6.70E-07

Gene family

Gene family	Subfamily
Transporter family	MPT

Gene Ontology

GO term	Description	Category
GO:0045036	protein targeting to chloroplast	Biological Process
GO:0008320	protein transmembrane transporter activity	Molecular Function
GO:0045039	protein insertion into mitochondrial inner membrane	Biological Process
GO:0009706	chloroplast inner membrane	Cellular Component
GO:0071806	protein transmembrane transport	Biological Process

InterPro

InterPro term	Description
IPR013761	Sterile alpha motif/pointed domain superfamily
IPR001660	Sterile alpha motif domain
IPR039175	Mitochondrial import inner membrane translocase subunit TIM22

trEMBL

trEMBL term	Description
A0A1S2YDW5	_

SwissProt

SwissProt term	Description
HP302_ARATH	Chloroplastic import inner membrane translocase subunit HP30-2

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G24650	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Medicago sativa L.	MsG0380016689.01.T01	_
Oryza sativa L.	LOC_Os04g33220.1	SAM domain family protein, expressed
Cucumis sativus L.	Csa015483	_
Glycyrrhiza uralensis Fisch.	Glyur000015s00000758.1	_
Codonopsis lanceolata	Cl_chr02_25000T	_
Arachis hypogaea L.	AH10G17000.1	Uncharacterized protein like

Expression pattern