Gene detail

Detail information of Am03G011380.1 Annotation

Gene ID	Annotation
Am03G011380.1	dual specificity protein phosphatase (DsPTP1) family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G011380.1	mRNA	Chr03	31092825	31094690	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM03G011380.1
ATTTTGTTGTAGTGAATATATGTCACTAAACTATTTTGCAACGTTAATATTGTTTCCCCAATACTCTATGTAGCGAAATACTCTATGTAAATATAATATATAGATCAATCAATTCTACATGATAATTACTAATATGGGCTACTTTTTTTTTATATAATATGCACTTCCATTTGATCCATCGCATTTTTTTTATATTATTTTATTGAATGATTTCTTTTATTTGCTTTTTTAGGTTTTTTTATGGATGTTTTTTTGTTTGTTTCATATTTAGATAAAACAATTGAATAATAATTAACTAACAGAATTGTATTAAACTAAATTATTATTCTAGACAATTTAATCAAAAATATATATAATACTGATGTGAATCCACACATGCATCACTAAATTTAGGATCTAGAAAATTACAAATCTCTATGAATCTCTAAGTCATGAATATGAATAAGAACACAATTTCAAGGTTAGATCATGACATTTACTTGAAGAATACAAAAGTGAAGAAAGAATCAAATGTGGAAAGAATAGAGATGAAGTGGAGAATGATGTCCGCCACTTCTTCCTTGGAAAGAAGATGAAGACCACACGCCGCTTTGAGCTTCTCCAAGCCTCAAAGGTAGGTGCTCAAGGTTCCATTCCAAGAACCAAGGGAGAGAAAACTATGCTCTCAAAAATCAAAATTCCATTTCATCAAAAAATTCCCCCAATTACACTTGGACTTAGGGTATTTATATATATTGTCCTACCTTTACTAGGCCCAAGGCCATTCCTTCCTATACTAGGCCGTAGCCTCCTACTAAAGCCAACATGGCTCAAATTACAAGTCCTTACAATTATTAAAAAAAGAAAGCAAAGCATAAGGAACACTAGGGTTTGGTTATCCTAGAAATACCATATTATTTACATGGTCACCTTTAATGTGCTTTTGTCTTAATAATTAGATTAAGCACATTAAAGTATTTTCTCTTGACTTATTGTTTTTGGTCTTTTGAGCTTTGTTCCTTGTGACTTTCATCCAAGTTCCATGATTAGGCTAGGCATGCATGTGGGCTCACATCAAATACTATATATATATATATATATATTTTCAATAACAATAACCGGTGCATTGTACTGCGACAATTCTAGTTCGAGAGTACTAATGTGGATGATTTGGATTTTGAAGTCTCCCAATTCAGCAACTAATGATAATGAATGGTGTTCCGGATCAAACTTTGGCTAGAGATAATGGGCCCAGGAGCCCAATTGTAAGCAAGCCCATTCGCACCACTATATATACCACTCCACACTCTAAAATAGGGTACACTTTCTCCACTCCTCTCATATGCTCCATTTTGATTATGGACTGACTTGGGCGTCAGAGTGCTTGCAGGTGGCGGCCTCCCCGCGCTTCGCATAGGAGCTGATACCATCTCGGAACTCGGCCATGTCATCTCGGATTTCGGATTTCCATTAGAGGATCACCACTGTGAGGTACGATTTTCTCTCAGTGAGTTCCGTTCGGAACAAATGGCATCACTGTCTTGAACAATACTGACATGTCACGACGTGCTTAACAAGTATAGCATGGTTTCACACTTAAAATTAGTTTTTTTCCTTAAATTTCCACATATCAACTTCAGCACATGTTTTTGACGTTGGCCTCGGGTTCTATTTCTCTTCTTTCTTCCACTCTTTTCTCATCTCATCTCTTTATTAGCCAATGGTGGTAGATGGTTGAACACGTAGGTCCAACAGTTTGTCATAGGGGAGGCTCAGTGAGTCTCTAGTTGACTCAGAGGAGAGGGGAGAGGGATTCGAATAGCACGGTTAAGGGAGAGGAGAATAATCTACTCACTCTGTTACAAAATATACTAAACAAAAATGGGTCAACGAAAGTTGATGTATCTGGTCTAAAATTTGAACCAGATACATCAACTTTCTTTGATCACAACCAGATACATCATCTTTAAAATTGGTGGAACTACCCTATTGAACCATAAAAAATGGTGTACGATACACCACTTATGCATTTCAAGCATGGTAGAATGTGATCGAAGCATATACTCAATTTGGGAAAACAGACTACTCGTCCCGCATCTGGCTTGCTTCCAATTCATACTTTATTGGACTAGGCCAAAAACCTCAGGTTGAAATCCAGGCTTATACTTTACAAGGCTTATACTTTACAATAGATGTCTAACCCTATGTGTGTTGTGGGTTTTTCGGGCTGCTCACTTTATACAAATTGCTAATTAAAACAGGTAAAATTGACCCTTATACAAGGTATACTTTGCGGGGCTTACGAGCTCGGGCTTTTTGTTTCAGGCTAAAAACTGATTATTAAACTAGACACAACATTTTCAATCCAAACCCCGTGCTTTTTCAATATTTTTCAAAGCGACCCATTTTGCGGCTTAGGTAATAAATATAGTGACTTTAGAATTGTTAGTGTCACACTCTCTATCACACTCTTTTGAACACATTATCTTATATTGGTTGAAACCCAACCAAATTTAAATGAAAACAAGATGATTTAGTAAAACTCATTCAAAATTCAACCATTAACCAAGTGTGTTTTGGGGAATGAGTGTCGGCTAGTACTAGCAACACATTTTCCAACATTTATTTTTCGGACACACTTTTTTTGGTTGAATTTCAAATTATCTTACTAAATCATGAGAGTCCAACCAAATCACACAAAGTTCTTCACTGTACTAACCTGTAAGCCACTCTATGAAGCGAAGCCAAATCGGGCTAATATCGAAGGGCGTTTTGGTAATAACAGTTTCATCATCACCATCATGTGCGTGTCGTATAATAATCAATATACACACAAACAAACAAACAAAACAAGAGAAGCAAGCAACGAAAGAGAGCGACAGAGGATTTGGGTTTTCTCTGTTTTGAAAATAGTCTTCCATCTCTCTATTCAGAGCTCCTTTAGACTCACAACTATTTTCAAAACAGAGAAAACCCAAATCCTCATGCACTTTTACGGTTCCTACCGTTACCAGCCACTCT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00782.23	DSPc	78	203	8.70E-17

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	CBM48

Gene Ontology

GO term	Description	Category
GO:0019203	carbohydrate phosphatase activity	Molecular Function
GO:0005983	starch catabolic process	Biological Process
GO:0009507	chloroplast	Cellular Component
GO:0004721	phosphoprotein phosphatase activity	Molecular Function
GO:2001070	starch binding	Molecular Function

InterPro

InterPro term	Description
IPR000387	Tyrosine-specific protein phosphatases domain
IPR029021	Protein-tyrosine phosphatase-like
IPR045204	Laforin-like, dual specificity phosphatase domain
IPR020422	Dual specificity protein phosphatase domain
IPR000340	Dual specificity phosphatase, catalytic domain

trEMBL

trEMBL term	Description
I3SHM7	_

SwissProt

SwissProt term	Description
LSF2_ARATH	Phosphoglucan phosphatase LSF2, chloroplastic

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G10940	dual specificity protein phosphatase (DsPTP1) family protein
Medicago sativa L.	MsG0380016740.01.T01	_
Oryza sativa L.	LOC_Os12g02120.1	dual specificity protein phosphatase, putative, expressed
Cucumis sativus L.	Csa016109	_
Glycyrrhiza uralensis Fisch.	Glyur000225s00014738.1	_
Codonopsis lanceolata	Cl_chr03_46130T	_
Arachis hypogaea L.	AH20G23490.2	Phosphoglucan phosphatase LSF2, chloroplastic like

Expression pattern