Gene detail

Detail information of Am03G011180.1 Annotation

Gene ID	Annotation
Am03G011180.1	general control non-repressible 5

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G011180.1	mRNA	Chr03	30660499	30667559	-

Sequences

CDS:

>Am03G011180.1
ATGGAGTTGGTCGCCAAGCTTCATCACCTCGACATTACCGGCGCATTCCTTTTAGATGCACGCCGTCCTCTTCTCCCACGCACCCTTACTCATACTCATTCCACCGCCAGAACCAACACCAATTTAATTTACCCTAACCGATTCTTCACCTCAAAAAGGACCAATTCTACTTCTCGTTTATCCGCCGTAGCCGTCGACGACACTTCACTAGCCCAAGACGACATCGAGTCTCTCTTTTCCGAGCCCTCTGTCGATGAACGACGTTCCAACAAGCAATCAAATACTGGAGCTTCAAGCGTTTCATCAGGTGTCAAGTTAGAGAATATCAGTAAAACTTATAAAGGTGTAACGGTTTTGAAGGAGGTTAATTGGGAAGTGAAGAAGGGAGAGAAAGTAGGTTTAGTTGGTGTTAATGGAGCGGGAAAGACGACTCAGATGAGAATTATAGCTGGTTTAGAGGAACCTGATTCTGGAAACGTGATAAAGGCAAAATCGAACATGAAAATAGCTTTTTTGAGTCAAGAATTTGAGGTGTCGCCGAGAAGGACGGTGAGGGAAGAGTTTATGAGTGCGTTTAAAGAGGAAATGGAAGTGGCTGCTAAGTTGGAGAAGGTGCAGAAAGCACTTGAGGGTTCTGTTAATGATTTGGAGTTGATGGGAAGACTTTTGGATGAGTTTGATTTGCTTCAGAGGAGGGCTCAGTCTGTGAACTTGGATGTGGTTGATTCAAAGATTAGTAAATTGATGCCTGAGCTTGGGTTTTCTCCTGAGGATTCTGATAGGTTGGTTGCTTCTTTTAGTGGTGGATGGCAGATGAGGATGTGTCTTGGCAAGATTCTACTTCAGGAACCTGATTTATTATTGTTAGATGAGCCCACAAATCACCTTGATCTTGACACCATTGAGTGGCTTGAAGACTATCTTAACAAGCAGGATGTTCCGATGGTTATCATTTCCCATGACAGAGCTTTTCTTGATCAACTGTGTACGAAAATTGTGGAAACTGACATGGGTGTATCCAGGACATATGAGGGAAATTATTCTCAGTTTCTAATTTCAAAGGCAACTTGGATTGAAGAGCAGTATGCTGCATGGGAGAAGCAGCAGAAAGAAATTGAACAGACAAGAGACTTGATAACCAGATTAGGTGCCGGAGCAAATTCTGGCCGTGCTTCCACTGCTGAGAAGAAATTGGAGAGACTTTTGGGAGAGGAACTAGTGGAGAAGCCATTTGAACGGAAGCAAATGAAAATCAGGTTTCCCGAGCGAGGAAGGAGTGGAAGATCTGTTGTAGCAGTTAGGAACTTGGAATTTGGCTTTGAGGATAAGACACTTTTCAAGAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTCTTGGTCCAAATGGATGTGGCAAGAGTACTTTACTGAAATTGATCATGGGTTTAGAAAAGCCAGTCGGCGGTGAAGTTATACTCGGGGAGCATAATGTGTTGCCTAATTATTTTGAGCAAAATCAGGCTGAGGCACTTGATTTGGACAAGACGGTGCTTCAGACAGTAGAGGAGGCTGCTGAGGACTGGAGGATTGATGATATTAAAGGACTTCTTGGGCGTTGTAATTTCAAGTCTGATATGCTTGACCGTAAAGTTTCCCTGTTGAGTGGTGGCGAGAAGGCACGGCTGGCTTTTTGCAAATTCATGGTAAAACCATCAACTGTGCTTGTTTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAACTGAGTACGAAGGCACTGTTATCACTGTATCTCATGATCGATACTTTATAAAGCAGATAGTTAATAGAGTGATTGAAGTTAAAGATGGCACTTTACAGGATTATGCAGGCGATTACAATTATTATCTAGAGAAGAATCTTGATGCTAGGGAAAGAGATCTGGAACGTGAGGCAGAGCTCGAGGACAAAGCTCCTAAAGTGAAAGCCAAATCTAAGATGTCTAAGGCTGAGAAAGAAGCACGGAAGAAGCAAAAGATGCAAGCCTTTCAGGCAGCAAAACAAAAGTCCAAAGGTTCTAAAAATGCAAAGAGGTGGAATTGA

Protein:

Promoter(3k):

>AM03G011180.1
TGTATTTATAGGCTTCATAAAGTGAAGTTGTTTGTATCAATTCCGAAAACCTGTAACTATTAATGACACCAGACAACTGTTCTCTATTATAACGTGAACTCATTTGTATCAATACCAACATTTTAATTCTAATCATTTCAAATTTCAGAAAATGCTCCAAAGCAATAAGAATCACCACATCAACTAATTAAAATCTATATGATTCAATCAATAATTTACTAGCTTCTGCCACACTTCTCAAATCAACTTAACCCACAATAACAATCTGCCAGAACCAGAATCCTAGCCCTTATCACCTTTGGGTATTTATTTCTGTTAAGTAAAGCAATTCACATTTCGAAACATAATTCAAGTGTGTGATTCCAATGCATTGTAAATTACTATTTCTTGAAATTATTAATGAGTATTGAGAAGCTCTAGTTTACCTTTGGAAAAAGATGAGTTTCTTTTAGAAGTTTCAAAATTGTGAGAAGTAATCAATGTTTACTTATTCATTGCTAGTAAAAGCCACGCGCCACTATATGAAGAGGTATTGTGAAGAGGTAAAAGCCACGCGCCACTATATAAAGCCAATTCTGCCAGAACCAGAATCATGTTAAACTAAGGCTTCATAAAGTGAAGTTTTCTTGGGCACCAAGGTGACTTTGAGATGAAGTTAGAGTTTCTTTTTCTACTTGTCTCAAAAAACTTGATTTGATCATCCACCAAATACAGAAAAGGGGTCCAATGGTGTAAGGACAAGTGTCCCTAAAAAATTCCCACTTGTAGTCTATGGTGCCTCAAGGATGGCGCCGAAATCTCCCACTTGGGCAACTTGCACTTTGCTTTTGTCTTAATGACGTCATCACCAGGATGCTGGGGCATTCTGCGTTGTTGCTTTTGTCCCTAAACCTTTCTTAACTTTAAAAGCTATAATTCTTTTGTATTTCTTTATTTATCAAAACATTATTAGTGAGATTCTCACAATTATTTAGATTTGAAAGCGTAAATAACTCTACGAGCAGCGATGGGAGCATGTTGCTCGAGCAGCGATGGGAGCATGGTGCTCGAGCCTATCTTCTATATCTGCTGGGCACCACCATTTTCACCAACCAGTCAGGGAACAAGGTGAAAGTGGCCTATCTTGGGATGTTTATTGACCTTGAGCAGGCTGGCGGCTACACATGGGGGAGGTAGTGGCACTTTCCCATCATATCACCACCTGGTCCTCGCCAAACCACTTTTATAGAAGCAATATCCTTAGACCATAGGCGCCAAATGCATTTGTCTACTATAACTACTAGTTGCTCAATATAGTTGATATTTTCATCAAGCTGTACTAATTGATGTTGAATATTATGAGAGGGATCATAAACATACTTCTGGAGCATCGATACATGAAAAACTTGGTGAGCACCTGAGAGATCAGGTGGAAGGGCTAAACAGTAGGCCAACTGCCCCACTTTCTCTAAAATCTCAAAAGGTATGACAAATCTCGAACTTAGCTCACCCTTTTTCATAAAGCTCAAAATTCCCTTCAGTAGAGACACGTGTAAGAACACATGTTCTCCAACACTAAACTCTAGAGGTCGTCGCCTTCCATCTGCATATGACATTTGTCTACTTTGAGTCATCACCAAACGATCTCGAATTACCCTGACTTTCTCAATTGCTTCTTGAATCAAATTTGGGCCCTAAGGTTTAGACTATCCAACTTTAAACCAACCAATCGGTGATCTGCAATGTCTCCCATATAATGCAATACGAGGTTGATAACTATCATTATAAGCAAATTCTATTAAGAGTAATTGATCCCAACTCCCTCTAAGGTATAACACACGTGAATGAAACATATCTTCTAAGATTTGTATTGTCATTTTAGATTGACCATCTGTTTGAGAGTAGAAAGTAGTGCCGAGATCTAATCGAGCCCCTAAAGCAGTCTGAAAAGTTGTCCAAAAATGAGATGTGAATTGAGGTCCTCAACCATATATTATAGACAATGGTGCGCTGTGTAAGGACACCATCCTCTCTATAAAAATCTTATCATATTGAGCTCCCGAATAAGTAGTTTTGATAGGCAGAAAGTGTGTAGACTTTGTTAACTGACAGTTATTCAAGCCAAGTCATAACCTCATGAGGTAAAAGCCCTGGTTTGCGCTGGGGAAGAGAAAGATAACGAAGAAAGTGCGAGAAAAAAATATGCAGGGATACTTCTGGTAGACTATTCGATCCTCAAATTGAAATACACGGAACAAAGGCATTCCGTATTGGTTAGGAATAAAAGATTTAGATTGAATTTGTTTGGGCTTGACCTCATTTTATATTTTGCACCCCTTGCTTTTTTAATGTACACCTTCCCGTATAACTTATTTTTTCTCAAATAACCCCCTATTTGAATCTTAATTTTGCAACCATGGCATCCTTTTCCCTATCCTGTCATTTTTTTTCCACATTATCCACGAAGACAAAGATATAGAGACAACAACGACGATTGAACATCCATATTTTCTTAACCCTGATTAGTATGAATGTGTTTGTTTGTGAATGTGTGTATTGGTTGTTTCAATGTATGCTTAGAATTGAGAGTTTAGATTAGGTTTAGGATGAAGAGGGACCAATTTTTTTTAGTTCCCATGCATATTATTATTATTAATATGTAATTTTTATATAGGGGTATTTAAATTATTTACAAGATATATCTTTTTCTTTAATCTCACTTTTTATTCACTTTCACCTCTCCAAAAAAATCATCTAAATTTTCAATCACTTTCATTCACTAAACATTCTTTCCTCTTACCTTCTTTCCGTTCACTTTCTTTTCCCATCAAACAAAGGATTAGTCTCGTATAACAGGCAGAAGAAGTAGTTATCAAGGGAAACAGAAAAAGCTCTAATATATTTGATAGGCTGAAATTTGCGCAGCATTAGTGGTGGGGTAGAGAACTCGTGTCATCTCTGTTCTCACTCACCAGTTCTCTCTTCTCTCCTCTCTGCCAATCTTGATCATCAAAGACGATA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00005.30	ABC_tran	119	294	1.40E-55
PF00005.30	ABC_tran	447	578	1.40E-55
PF12848.10	ABC_tran_Xtn	333	420	1.70E-19

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005524	ATP binding	Molecular Function
GO:0016829	lyase activity	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR032781	ABC-transporter extension domain
IPR017871	ABC transporter-like, conserved site
IPR003439	ABC transporter-like, ATP-binding domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A9D5AEN5	_

SwissProt

SwissProt term	Description
AB5F_ARATH	ABC transporter F family member 5

KEGG

KO	Description	Enzyme
K06158	ATP-binding cassette, subfamily F, member 3

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G64840	general control non-repressible 5
Medicago sativa L.	MsG0380016762.01.T01	_
Oryza sativa L.	LOC_Os11g39020.1	ABC transporter, ATP-binding protein, putative, expressed
Cucumis sativus L.	Csa010287	_
Glycyrrhiza uralensis Fisch.	Glyur000999s00024094.1	_
Codonopsis lanceolata	Cl_C15880_unscaffolded_00010T	_
Arachis hypogaea L.	AH10G17780.1	ABC transporter F family member 5 like

Expression pattern