Gene detail

Detail information of Am03G011020.1 Annotation

Gene ID	Annotation
Am03G011020.1	cellulose synthase 6

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G011020.1	mRNA	Chr03	30110797	30118956	+

Sequences

CDS:

>Am03G011020.1
ATGAACACTGGAGGACGACTCGTTGCTGGATCCCACAACAGGGGCGAGTTCATTCTCATCAATGCCGAAGAAAATGCAAAGATTGTGTCTGTCCAAGAACTGAGTGGACAGATATGCCAGATTTGTGGGGATAAAATAGAGATTGCAGGGGATGGGGAGCCCTTTGTTGCCTGCAATGAGTGTGCTTTCCCTGTTTGTCGGCCATGCTATAACTATGAGAGAGAAACGGGGACTCAGGCATGTCCACAGTGTAAAACCAGATACAATCGTATCAAAGGTAATCCTAGGGTTGAAGGTGATGAAGATGAGGATACTGTTGATGACTTAGACAACGAGTTTAATATTAGACATCCTGATTCTCTGGGACAAAATTCTACTTCATATGCTGCCGTCCCCAAAATTTTGGATCATGACTCGCCTCCTCTCAATTCTGAAATCCCACTTTTGACTCATGGGGAAGAGGATCTTGATATATCTTCTGATCAACACGCTCTAACCCCATACACGAATAATGGAAGCAGAGCTCAGTTTGTTCCATTGCAACCCAGGCCAATGGTTCCAGAGAAAGATATTGCATTGTACGGGTATGGAAGTGTGGCTTGGAAAGATCGGATGGAAGACTGGAAGAGGAGGCAGAATGACAAACTTCAGGTGGTGAAGCGTGAAGGGGATAACACTAAAGGAAATTTTGGTGATGAGTTGGACGGCGACTTACCCATGATGGATGAAGGCAGGCAGCCACTTTCACGGAAGCTGCCTATCCCTTCAAGCACGATAAATCCATACAGAATAGTTATAATACTCCGCCTTGTAATCCTTGGGCTTTTCTTTCATTATAGAATTCTCCACCCAGTTAATGATGCATATGGCTTGTGGTTGACATCAGTCATATGTGAAATATGGTTTGCTGTATCATGGATAATGGATCAGTTTCCAAAATGGTGCCCAATAGTGCGAGAAACATACCTTGATCGTCTGTCGCTGAGGTATGAAAAAGAAGGGAAGCCATCTGAATTAGCCAATGTGGACGTCTTTGTCAGCACAGTTGATCCCATGAAAGAACCTCCATTGATAACAGCAAACACTGTTCTATCTATTCTTGCAGTTGATTATCCAGTTGATAAAGTTGCATGCTATGTCTCAGACGACGGTGCTGCCATGCTTACTTTTGAGGCCCTTTCCGAGACGTCTGAATTTGCCAGGAGATGGGTGCCATTTTGTAAAAAATTCAATATTGAGCCCCGAGCTCCAGAATGGTATTTCAATCAGAAGGTTGATTATCTGAAAAATAAAGTACATCCAGCATTTGTCAAGGAAAGGAGAGCAATGAAGAAAGATTACGATATATTTAAGGTGAAGATAAACAGTTTAGTTGCAACTGCACAGAAGGTTCCTGAGGATGGATGGGCAATGCAGGATGGAACACCATGGCCCGGAAATGATGTGAGGGATCACCCTGGCATGATTCAGGTCCTTCTTGGTCATGATGGTGTTCGTGATGTTGATGGAAATGAGTTGCCTCGCTTAGTATATGTTTCTAGAGAAAAGCGACCGAGCTTTGATCATCACAAAAAGGCCGGGGCAATGAATTCTCTGATACGGGTGTCTGCAATATTCTCAAATGCGCCTTATCTTCTGAATGTTGATTGTGATCACTACATCAACAATAGCAAGGCACTTAGGGAAGCCATGTGTTTCATGATGGACCCTCAAATTGGGAGAAAAATTTGTTATGTACAATTTCCTCAAAGATTTGATGGGATTGATCGCCATGATAGATACTCAAACCGGAATGTTGTATTTTTTGATATTAACATGAAAGGACTGGATGGGATACAAGGACCTATTTATGTTGGAACTGGATGTGTTTTCAGAAGGCAAGCGCTTTATGGATATGATGCACCTGCCAAGAAGAAGCCCCCAACCAAGACCTGTAATTGTTGGCCAAAATGGTGCTGCCTATGTTGTGGCTCTCGAAAGAAAAACAATGCAAGCGTCAAGAAGGAGAAAAAGAAGGTGAAGCACAGGGAAGCATCGAGGCAGATACACGCACTTGAAAATATTGAAAAGGGGCTTCATGGATCCAATATGGAGAAGTCATCCAATTTGACTCAAATGAAGTTGGAGAAGAGGTTTGGGCAGTCTCCAGTGTTTGTTGCCTCCACTCATTTGGAAAATGGTGGAGTTCCACATGACACAAGCCCTGCATCACTCTTAAGCGAAGCAATCCAAGTCATCAGCTGTGGTTATGAAGACAAAACAGAATGGGGAAAAGAAGTTGGTTGGATATATGGTTCTGTGACTGAGGATATCTTGACCGGATTTAAAATGCATTGCCATGGTTGGCGGTCTGTGTATTGCATCCCTAAGTGGCCGGCGTTCAAGGGGTCAGCACCTATCAATCTTTCAGATCGTTTGCACCAGGTTCTTCGGTGGGCCCTTGGATCTGTTGAGATATTATTGAGTAAACATTGTCCTATCTGGTATGGCTATGGCGGCGGGCTGAAGTTGTTGGAACGATTTTCGTACATAAATTCAGTTGTATATCCTTTGACTTCCATCCCGTTGATAGTTTACTGTACTCTACCAGCTATATGTCTGCTGACCGGGAAGTTTATGGTACCTGAGATTAGCAATTACGCAAGTATTGTGTTTATTGCCCTCTTCATATCCATTGCAGCAACTGGTATCCTTGAAATGCAGTGGGGTGGTGTTGGTATAGATGATTGGTGGAGGAATGAACAGTTTTGGGTGATTGGTGGTACTTCTTCACACCTTTTTGCCCTTTTTCAGGGTTTACTGAAGGTGTTAGCTGGTGTCGACACAAATTTCACCGTTACATCGAAAGCAGCTGACGATGGAGAATTCTCAGAGCTCTATATCTTCAAGTGGACCTCACTATTAATCCCTCCAATGACTTTATTATTCATAAATATGGTTGGGGTTGTGGTTGGGATCTCAGATGCCATCAACAATGGATATGATTCATGGGGTCCTCTCTTTGGTAGATTGTTCTTTGCCTTGTGGGTCATCGTCCATCTTTGTCCATTCCTCAAGGGGTTACTTGGTAAACAAGACAGGATACCCACCATTGTATCGGTTTGGTCAATCCTACTGGCCTCCATATTGACTCTCCTGTGGGTCCGAGTTAACCCATTTGTGTCAAGAGATGGCCCTGTGTTAGAAATTTGTGGATTGGATTGTGATGAATAA

Protein:

>Am03G011020.1
MNTGGRLVAGSHNRGEFILINAEENAKIVSVQELSGQICQICGDKIEIAGDGEPFVACNECAFPVCRPCYNYERETGTQACPQCKTRYNRIKGNPRVEGDEDEDTVDDLDNEFNIRHPDSLGQNSTSYAAVPKILDHDSPPLNSEIPLLTHGEEDLDISSDQHALTPYTNNGSRAQFVPLQPRPMVPEKDIALYGYGSVAWKDRMEDWKRRQNDKLQVVKREGDNTKGNFGDELDGDLPMMDEGRQPLSRKLPIPSSTINPYRIVIILRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWIMDQFPKWCPIVRETYLDRLSLRYEKEGKPSELANVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARRWVPFCKKFNIEPRAPEWYFNQKVDYLKNKVHPAFVKERRAMKKDYDIFKVKINSLVATAQKVPEDGWAMQDGTPWPGNDVRDHPGMIQVLLGHDGVRDVDGNELPRLVYVSREKRPSFDHHKKAGAMNSLIRVSAIFSNAPYLLNVDCDHYINNSKALREAMCFMMDPQIGRKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPAKKKPPTKTCNCWPKWCCLCCGSRKKNNASVKKEKKKVKHREASRQIHALENIEKGLHGSNMEKSSNLTQMKLEKRFGQSPVFVASTHLENGGVPHDTSPASLLSEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKWPAFKGSAPINLSDRLHQVLRWALGSVEILLSKHCPIWYGYGGGLKLLERFSYINSVVYPLTSIPLIVYCTLPAICLLTGKFMVPEISNYASIVFIALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGTSSHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSELYIFKWTSLLIPPMTLLFINMVGVVVGISDAINNGYDSWGPLFGRLFFALWVIVHLCPFLKGLLGKQDRIPTIVSVWSILLASILTLLWVRVNPFVSRDGPVLEICGLDCDE*

Promoter(3k):

>AM03G011020.1
ACCATTTTCTATCAGGGATCCCTCATGGGGCCTAGGTTCATAGTGCTCATGACTTCCCCTCCCCTAGTACGCTAACCTCAATAGGGTCGTCACCCTAGACCTCGATTATATAATTTATATATAATTGCACCCGCATTGGGCCGTCTCTTTTACTTGACCTAGATTTAACATAACCTCAACCTCAAGGAAAATATAGTTCATTTTATCATTTCGTGACATTACCTCACTCGTGGTTACTAACATTCATTAACATAACTTAGAAGATTTACAATTCAATCCAATCATAATTACCTCAATCACAATCAACATAATCATTTCAATTACAATCAATATCATAGCATGAAACTTACCTCAACCTCATGGTCATTCACATAGAACCTTCGCATCATATCAATAAAACATAACATAATCACATTCAACATCAACACATAGGGTTGGGGAAAAGATTAGAATAGGTTTGGAATCAATTAGGAAGGGTTTGGACACATTTTAAAATCTGGGACAGAAAGATCAGCACGGCTCGTGCTGACTTATCAGCATTTTCAAAATTCTTGTTTTCGTGTGAAATTCTCATTCCGATCGATTCCGAAACTTATTCCGATCGATACCCAACACAATCAAACATTATTCCAGTATCAAACAACAAACATTTCCAGTCCAACACACATCAAACATAGCATCAAATCATCCAATCTCAATCATTCAAACATTCATAACCAAATACAATTTCCTAATTACGGTTTTCGCAAAACAACGACTTTCAATGAAATCGAACGAAACGAAACACCAAAACCTATTTTCAGTCACATGCAAGGTTGACACAATTAAAATGAAAACCCTAAGCGAGTATAGAACTCACCCGGAGCGACGAACAACTCGAATAACGGAAGATGCGATCAATCTTTCTCCGATCCGAACTATTTCTGGACAGCATCAGGGAGCAGTTTTGGGATGAGCATAACATATTCGATTTCTAACCAAAACCATTCAATCCAGGGCCTAATGTGTAGATAATTTTGTCTATTTTCTGAGGGTTCAGGTTTCGTGTTTATACGACATGTATCTGGGGAGTTACAGCGAAAACACTGAGAATAGGTCAACACTGTAACTGATTCATAAACCTAACTTGTGGACATGATATCTTCCTCAATACATAACGAAATCAGGTGATTCTTGTGTTACTCACTTAATTCTACTTCTAATCAATTAACTCATCATTAGCTCATATACTTAACATAAATTAACCAACTAACACACAATTTTTATTTATTTAACACATGGAAATGACCTCATATATAATTAATTATGCTAACTACTTGGAATAGCTAACTAGCTATCTATGGTCTATTGCTAAATTCCGGTAAATGAATTTTACTAACATGGTTTGATTGGTTGATCCTGTTCAACCATAATTATACCTGATGACTAAAAAATAAATAAAAAAGGTATTAATTTGTAGGGAAAGTGTAAATAAAAAAGTCAAAAAATAATTCTAAATAGTTCAACAAAGCCCAATTAATGATTCAATCGTCATTCAATCCAATTTTGGGTGGTCCAACCAGGTTGCGATCAACTGAGGTTAGACGACCACTAGACTGATCGGGTCACGATTCGATTCAACCGATTGATCCGTTCAGTTCACTTGTCTCAATACTTTTGACTTTTAAATTTTTTTCTCCATTTTCCGTCGTTGATTTTAATAGGTCCAAATTCTAGGTCCAATGAAATTATATAAAACTGAAAAAGTGAACGGGCAAATAAAATAAAAGTAAATTAAAATAAAAAATGACACAGTGGATGTATGGTTTCTTTTTTTGGTCAAAGGGATGATGTATGGTTTGTTTATCGGGTAGGAGCCAGATGGTGAAAGGAAAGGTGATTTACTGTCGATTCCAATAATCCATAGGTGATTTACTGGATACAGCTCATAGGCGCAGCACAGTCAAAAGTTGTATTAAGTTTAGTTAATGACAGATTCCAAAAGGTCCGTACAGCGAAACGCTCGCGTAATTCATCATCATCCGTCAGAATATCAAGCAACCAAAAAGGCCAACATTAAACAAAACTACAAAAGTACATACATACTACATACTTCTACGTAGATAGATACATCCACGCCACTTCATTACAAACTGGAGTATACACAGTTACACACACACTCACTCACTCACACTGTAGGATGGATGGTGTGTACTTATACAGTATTTTTGTAAGGAAAAGACACGACACGATGATCTACGCCGCGTGAGCAGATCCTACTCGCCAGCTAGACAGACAGATTCACCACTTTACTCTCAATCTCCTTCTCTCTCCTCTTAACCCTGAACCGACAGTTTAGGGGTTTCCATTTTCTGCAAAACAAAAACCCTACACACCGCTTCAAACAACAATCACTCTGCCGACGACCTCAGATATAAAAAAAGAAATTACTCCCCAGATTTTCATTTGCGATAGAAGAAGACAAGACACCATCAAAGAAAAGAATAGTAGTAGGAGTAAAAGCTTTCACCAAACTCCTCCGGTGGGGCACAAAAACACACGCACACACACACAGGCCATCTGGGCCCCACCCACCTCCCTCGTCTATTCTAATCAATTAATTAATCGATTTTTCCCTCGTCCCTTATTTCAATCTGTCCTCCTCAACCTGGATCTCTCTCCTGTACGTCCTTCTCTCTTACGCGTCTTCCTTTCCACATTCACAATAATAATATTTTTTTTCACTCTCTCTCTCTCTAAAGTTTGTTTGCCATAGATCAGGAGTACGAAGGATACTTGGCTTCTGAAGGAATTCAAATACTAGCACGCCTAAGTCCACGGCCTTATATTTTTGTTTATTTTTTATTTTTAACGCAAATTTATCTACATTGAATTGAATTAAAATCTCAGTCATTTTTCGGATCCGTTTTGGTTACGAGAGTCTTCTCCGTCGTGCAAAACTGAATATTCTTTGCGAGTGACAGTAAGCAAAATTGGTTTCGAGTTGAGTGTCGGTGAGTG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03552.17	Cellulose_synt	342	1057	0
PF14569.9	zf-UDP	31	105	1.60E-36
PF13632.9	Glyco_trans_2_3	759	865	4.00E-08

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT2

Gene Ontology

GO term	Description	Category
GO:0009833	plant-type primary cell wall biogenesis	Biological Process
GO:0005886	plasma membrane	Cellular Component
GO:0046872	metal ion binding	Molecular Function
GO:0071555	cell wall organization	Biological Process
GO:0010192	mucilage biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR001841	Zinc finger, RING-type
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR029044	Nucleotide-diphospho-sugar transferases
IPR027934	Cellulose synthase, RING-type zinc finger
IPR005150	Cellulose synthase

trEMBL

trEMBL term	Description
A0AAN9Q0V7	_

SwissProt

SwissProt term	Description
CESA6_ARATH	Cellulose synthase A catalytic subunit 6 [UDP-forming]

KEGG

KO	Description	Enzyme
K10999	cellulose synthase A	[EC: 2.4.1.12]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G64740	cellulose synthase 6
Medicago sativa L.	MsG0480023279.01.T01	_
Oryza sativa L.	LOC_Os07g24190.1	CESA3 - cellulose synthase, expressed
Cucumis sativus L.	Csa010072	_
Glycyrrhiza uralensis Fisch.	Glyur000096s00005924.1	_
Codonopsis lanceolata	Cl_chr02_59070T	_
Arachis hypogaea L.	AH10G18240.1	Cellulose synthase A catalytic subunit 6 [UDP-forming] like

Expression pattern