Gene detail

Detail information of Am03G010330.1 Annotation

Gene ID	Annotation
Am03G010330.1	ssDNA-binding transcriptional regulator

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G010330.1	mRNA	Chr03	27950269	27953534	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM03G010330.1
TTAACTAAAATTATAAAAAAAAATTATTGAATGTCTATAGAAATGTCTATAGAAATGGGAGGGTTGCTTAATTGAGTTGAAAGAGGCATCCACGTGCTTCCAAGAAGAATGATCTCTCTTCACATCATACTCTTTCTTCTTCTTCTTTGGTGTACCTCTAGTCTTGACTTTGTGCTTAGGTGGAACCAAGGATGTAGTGCTTGGGAAGACATAATCATCAAAACCTCTCTTAAAGACAAATCTCTCCTCAAGAGACATCACAGCCCACCGCCTCCAAATCTCCTCTATTGTATAGCTTATGTCACATTCAAGTGAAGCTTGTTTCACGCGCTCCTCATCCATACTCTCCAAACTGAGCCTCATCCAATGAGAGTCAACCATATCCAATGGGATTGGACGACCATGTAGGTGCAAATAACCAAGCTCACAAGAACAAGGTAACCCATGGGTAACTTTAATCACACAACCACCACAACGGGTCTTATCGGTGCCTACTCCACCCAACATGCCATCAAACTCATCAGCTATATGATTCAATGCCTCCAAAGACACCAAACCGTGTAGACTCTTGTAGAATGGAGTGTTGTGTCGGGCATCTACACGGTTGATACTTTTTTGAAATGAAACGACAATATTATCAATTTGTGCATTGATCATCCCATGCATTGACTCCCAGCTTCTACATAAATCACCTCCACTAGAACCCAGTGACCTCTTCAATGACCAATGGGCTGGCTCAACCCTATATGTAACAAATTAAAACACATAATAAAAAAATTGACTTGAAATAAATTTAAAAGACACAAGGAAAAAATTAATGTACCTATTAGTCGTGGTATTCCTATAGTGTCTGACTTTATCAGTCCACGGTCCAACAAATCTTTCCCTGTGAGGATACAACCAATAGTTGTTCACATAATTGACAATCTGGGGTATATCAGCACACGAAGCTTCAAAATCATGCAACATCTCATAAAACTCCTCCTCACATATAGAGTAAACTGTTGCATGCCAAAGTCTCATCACTTGTTTCACTCTATCTCCCTTGACCGCCTTCTTAATCTTAGCATTGACATTGTTGTTAATGTGATACCGACAAAGCAAATTAACTGCCTCAGGAAACACAATCTTGATAGCAGTCATCAATGCCTCCTCACAGTCAGTGAGGATAATCTGAGGAATTGGGATATCTACCACCATCAAATCTCTTAGACTCTGCAATGCCCATCTGTAGTCACCATATCGCTCATGAGACAAGTAAGCAAATGCTACTGAAAATGTCAACTCAGTGCAAGTGACACCAAGAATCTCCAGGAGAGGCAATGCATATTTGTTGGTCTTGAAGGTGCAGTCCATAATCAAGACACTAGAAAACATCCTCAATAACTTGATACTCTCAGGGTGTGTCCACATGATCTCCTCAACAATATCAGTTCCTTCAAACCGTCTGGTCCAACACAAGTAATGCTCAGACTCGATCAGTCTCATAAGCTCCTGCATCTCAGTCCTACTACATCTCCTGCCCGATCGGAGTTTGCTGCGAGTTCTACAGTTGAGAGATCTTACTCAAGTTGCTGGCAAATCTCCTCTTTATTGCCTCTAGACTTTTTTGTGCTTTCACTCCCAACAACAAATGCTTAAACTTACCAAATATTGCTGCTCCAAGCCAAGTCTTATGAGGCTCATGATTGTGACTTCCACACATAACTTTAACCTTCCAATCAAAATTAGGAGGATTGAGTGGTTTAGCTTTCAATCTAAAAGGACAACCACACTTTTTTGAGATCTTGTGTCTAGTAGAACACCCAACATCTACTGCAGTATATCTCCCATGTCTCTTGCAATCCAAAACGATCTTATTCTTCTTCCCTTTACCATTCTCCGTGGACTCGGATCGAATAATAATAACAATAACTCTGTTGGCTTTCCCGATATCTCTAGCCCAACGTACAAGATTATCCCGAGTAGGAAAAAGCTACAAAATAATCGTAAACTAAATTAATAACTTATAACAAATAATAAACAAGAAGCGCTTTAGGAAGATATGTACCTCTGAGGTAGTAAACTCGTCCGATAAATATATAGTAAACGGAAGTCTGCCGTCAGCTGTAGCCATATCTGTAAAATAACGAAAAAGTAAAAAACAAATTTAAAAACAACTTCCGGAATTACCGAAAATACACGTAATTTCGGAAGGGACATTTTAAAACTTCCGGAAACACGTAAAAAACGGTATTTCCGGAAGGTAAAAAAACAAACTTTCCGGAAATACAAAAAATTTGCTGTTTCTGGAAGCAAAATAACTGTTCTGGAAATACAGTATTTCCAGAAAAAACGCGAATAAATGAGAGGGGTATTTTGTGGGGTATTTCCAGAAAAAATGCGAATACACGTAATTACCTTTAAATGAGATAATTCCGAGAAACCTAATTTTGTGGGGTCTGGTTAGATTTTGGTAAAAATGAGAGGGGTATTTTTGGGTTAAACTGAATTATGGGGGGTGTTGAGTATAAAGAGTGGGGTACAAAAGAAAAAATCCATTAATGAATTAGTTAATTAATTAATTTAGTTACTATATTACATCATTTTTACATTAGGGTACTTGTGTCATTTCCTAAATTTATCTCTTTCTTTCCTCTCACTTTCACTCATACCAAACAACCCAAAAATCATCTCACTTTCCACCCACTTTCTTTTCACTTTCATTTCTCCAACATTCTTTCCCCCCTCTTTCCTTTCTCATCCAAACATAGTGTACAATTAAAAGCTGCCGTAGGCTACCGGAAGAGAGAAACGGGATTTTGAGGATCTTCTACTCTCTAAAACGAAAAACCTGTACACTTCCCGAGTGATTATTGGACCTCCGTTTAAGCGCCAAAAGGGTTTCTAGGGTTTAAATTTTTGGTCATTTCCATTTCCTCGATTTCATTTCTTCAAACCCTTTCATCACATCACACACCTACACTCAGAGAGTGAGAGAAATCTGAGAACTTTCGAGAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02229.19	PC4	41	92	1.10E-25

Gene family

Gene family	Subfamily
Transcription Factors Family	Coactivator p15

Gene Ontology

GO term	Description	Category
GO:0003713	transcription coactivator activity	Molecular Function
GO:0005667	transcription regulator complex	Cellular Component
GO:0005634	nucleus	Cellular Component
GO:0003677	DNA binding	Molecular Function
GO:0016020	membrane	Cellular Component

InterPro

InterPro term	Description
IPR003173	Transcriptional coactivator p15 (PC4), C-terminal
IPR009044	ssDNA-binding transcriptional regulator
IPR045125	RNA polymerase II transcriptional coactivator Sub1/Tcp4-like

trEMBL

trEMBL term	Description
A0A834X9U3	_

SwissProt

SwissProt term	Description
KIWI_ARATH	RNA polymerase II transcriptional coactivator KIWI

KEGG

KO	Description	Enzyme
K25815	activated RNA polymerase II transcriptional coactivator p15

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G09250	ssDNA-binding transcriptional regulator
Medicago sativa L.	MsG0380016860.01.T01	_
Oryza sativa L.	LOC_Os02g34840.1	RNA polymerase II transcriptional coactivator KIWI, putative, expressed
Cucumis sativus L.	Csa016031	_
Glycyrrhiza uralensis Fisch.	Glyur000614s00017188.1	_
Codonopsis lanceolata	Cl_chr03_56020T	_
Arachis hypogaea L.	AH18G32130.1	RNA polymerase II transcriptional coactivator KIWI like

Expression pattern