Gene detail

Detail information of Am03G010210.1 Annotation

Gene ID	Annotation
Am03G010210.1	beta-galactosidase 10

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G010210.1	mRNA	Chr03	27610582	27618867	+

Sequences

CDS:

>Am03G010210.1
ATGAAGCTCTCTTTCATTTTCTTGTTACTGTCTTCCTTCACATTCACCTTCTCCTTCTCCTTCGCCGGTAATGTCACCTACGATGGTCGCTCCCTCATCATCGATGGCCACCGGAAGCTTCTTATCTCTGCTTCCATTCATTACCCTCGAAGTGTTCCTGCGATGTGGCCTAGTCTTGTTCAAACAGCAAAGGAAGGTGGTGCAGATGTGATTGAAACCTATGTTTTCTGGAATGGCCATGAGCTTTCTCCAGGCAATTATTACTTTGGAGGACGGTTCGATCTGGTCAAGTTTGCCAACATTGTTCACCAGGCTGGGATGTACTTGATTCTTCGGATTGGCCCTTTTGTTGCTGCCGAATGGAATTATGGTGGTGTACCAGTGTGGCTGCATTATGTTCCAGGCACTGTATTCCGGACTTACAATCAGCCTTTTATGTATCATATGCAGAAGTTTACGACTTACATAGTGAACCTTATGAAACAAGAGAAGCTTTTTAGCACGCAAGGGGGTCCCATAATCCTATCCCAGATAGAAAATGAATATGGATACTATGAGAACTATTATAAAGAGGATGGTAAGAAATATGCTTTGTGGGCTGCAAAAATGGCTGTTTCTCAAAATACAGGTGTCCCATGGATAATGTGCCAACAATGGGATGCTCCAGATCCTGTGATTGATACTTGTAACTCATTCTACTGTGATCAATTTACACCTACTTCTCCAAATAGGCCAAAAATGTGGACTGAGAATTGGCCTGGATGGTTTAAAACTTTTGGAGGCAGAGATCCTCACAGGCCCGCAGAAGATGTTGCTTTTTCCGTTGCTCGTTTCTTCCAGAAAGGTGGAAGTGTACATAATTACTACATGTATCATGGTGGAACAAATTTCGGGCGTACAGCAGGTGGTCCATTCATTACTACAAGTTATGACTATGACGCCCCAATAGATGAGTATGGGTTACCTAGACTTCCAAAATGGGGACATCTTAAGGAACTTCATCAAGCTATCAAGTTATGTGAGCATGTATTGCTTAATGGTAAATCGGTCAATACCTCCCTTGGTCCTTCTGTGGAGGCTGAAGTCTATACTGACTCATCTGGAGGATGTGCGGCCTTCATTTCTAATGTTGATGATAAAAATGACAAGACAGTGGAATTCCGGAATACGTCATATCACGTGCCTGCGTGGTCAGTTAGCATTCTTCCTGATTGCAAGAATGTAGTGTTCAACACAGCAAAGGTTTCCTCCCAGACGAACATAGTTGCAATGGTTCCAGAGAATTTGCAGCAATCAGATAAAGGTGCAAAAACATTGAAATGGGATGTATTTAAGGAGAACCCAGGGATCTGGGGGAAGGCTGACTTTGTCAAACATGGCTTTGTCGACCACATTAATACTACCAAAGATACCACTGACTATCTGTGGCATACAACAAGTATATTTGTTGATAAAAATGAAGAGTTCCTAAAGAAAGGAAGCAAACCGATTCTTCTAATAGAATCCAAGGGTCATGCTCTCCATGCTTTTGTGAATCAGGAATATCAAGGTACTGGAACTGGAAATGGTACACATTCAGCATTCACTTACAAGAATCCCATATCTCTTAGGGCAGGGAAGAATGAAATTGCTTTACTGAGTTTGACTGTTGGCTTACAGACCGCTGGACCATTTTATGACTTCATAGGGGCAGGAGTAACAAGTGTAAAGATTGAGGGACTCAACAATAAGACGATAGACTTGTCTTCTGATGCCTGGACTTACAAGGTTGGAGTACAAGGAGAACATCTAAGGATATACCAGAAAGATGGGTTGAATAGTGTGAACTGGACATCTACTTCAGAACCGCCAAAAGGGCAGGCATTGACGTGGTACAAGGCTATTGTAGATGCTCCACCTGGGAATGAACCAGTTGGACTGGATATGTTGCATATGGGGAAAGGTCTAGCCTGGTTAAATGGAGAAGAAATTGGAAGATATTGGCCTAGGATAAGCGAATTTGAGGATAAAGATTGTGTTAAAGAATGTGACTACAGAGGCAAATTCAATCCAGATAAATGTGACACTGGCTGTGGGGAACCTACACAACAATGGTATCATGTTCCACGATCTTGGTTCAAGCCATCTGGAAATGTTCTTGTGATCTTTGAGGAGAAAGGTGGAGATCCAACAAAGATTACATTTGTGAGACGTAAAGTATCTCGAGCGTGCGCCTTTGTTGCCGAGGATTATCCCTCTGCTGCACTCCTTTCTCAGGGTGAAGATAAGATGGAGAATGAAAAAAGTGTTCCTTTTGCCCACTTAATTTGCCCCAGTAACACCGTTATATCTGCTATAAAATTTGCTAGCTTTGGATCCCCTTCTGGAAAATGTGGAACTTACCTGAAAGGAGATTGCCATGATCCCAATTCTAGCTTAGTTGTTGAGAAGGCATGTCTAAACAAAAACGAGTGTGTCATAAAATTAAGTGAAGAGAATTTCAAAAGCAACTTGTGTTCTGGTGTATCAAGGAAACTTGCAGTGGAAGCGATCAATGGATTTTCTTCACACGAAACAGTGAAACGGCACCTTAGTGGTAACATTTTGATTCATGATGTAATGACGATTGATCACGGCATTGAAATACTAAATAGTGCCTCATATTTGGATCTATTTCAAGATCGTACATTAGGTGACCAGAATGTCAGCTGCACCGTCATCAGTTAG

Protein:

Promoter(3k):

>AM03G010210.1
ACAAATAGTTGCTCTTTCCTCCCGTGAAGCAGAATATGTTTCTGCATGTAGTGCTGCCACACAGGCAGCATGGCTGGAAGCCTTGTTAAAGGAGCTAAAAGTGGACCTGACTCAAACTCCTACACTTCTAATTGACAACAAGTCCGCCCTATGTCTTGCTAAGAATCCTATTGGGCATGGAAGGACCAAGCACATTGAAACAAGGTACCATTACCTTAGAGATCAGGTTACTAAAGGTAATTTGATTGTAGATTACTGCTCTACAAAGGATCAGTTGGCTGATGTGTTAGAATTTTCTTTAAGAGTGTGAAAATCAAAGGAGAAAGTGCAACCAGAGAAAGAGTGAGAGATTACCTTCTAATAGTGAGAATATTGTAGTTGTGATACTAAGAGTGTTCGTTCACAAAGAACCAGTCAGTATACATGCAAAACAGAAACAGATTCACATTAAGATTCGAATCGAAAGGAAGAAAACGAAGTATAAACACAAGGAGGTGACTGGATATCTTTGTTTGCCTTTGATTCGACCATCGTGGTTCTATTTGCAGTAAAATAGTACATGCAATCAAGAAGTACAAAACACAAAGTCAGATTCGAAGTTTTAGGGTTTTACAAACAGTAAAGTCAAAGAAGCAACAAAGGTTATTGTGCAATACCTTTTCGTGTTGACATCTGGAGCTGTATTCTTCAAGTTTCAGCAAGCAAATCATACATACACAGCAAGGGCAAACAAAAATTAGGACTGCGAAACCTACAACTCTCAAAACAGAAAATCTAACTATCAAAACAAAGGGCTTTTGATAGATACCTGTTGTGTTCGTCTTTCAAGTAGTTGTTGAGTTGATTCCAGCTTCAAAATCCTGCAAAAACAGTAGAATGCAGCAGGGAAAGAAGAAAGAAGACGAAGGAAAGAAAGAGAGAAGACCTCAGTGTTGAAAAACGGCGTAAATTAGGGTTGTTGTTCGTTTCTAAGCAACGGGTCGTGTTCGAGCCCGTGTTGACTCGTATCGTGATCCACTGGGTTCCGCAAGAACCCGTTTGGCAGCCAAGTTGGGCTGCTGTGTGTTTTTTGGCACGTTGGGCTAAGTTCTTGGGCCTAAATCTGCTATCTACACCTAGTGGGTTTGTTAATTCAACCCCAACAAATACAAGTCAAAGCATTGTTCCACCAAAGAGGCGAAGACAAGCTAGAATCTCTACCCACACCAGAAATAAACCAACACCATGACAAAAATGTAATACGAGCGACAATTGAATCAATCTTGGCATCTTCCCCTCTAAAGCAAACTCCATCCCGGGCAAGCCAAAGACACCAACAAATTGTCAACCAGAGTAAGTATTTAACCTTCTTGGATATAGTGTTAATATAAGGTAAGAGACATAGGCAGCTGGACATCAAGTCATCGCTCTATCTCCCTCCAAAAGTTGAATAAATTATTCTCTCTTATACTATATCTCTTATAATTTTCAAGTTTATTTTAAAAATTAATTGACTTATGATGGCAACTCTCTATTGTTATGGGGCAAACGAATTTTTTTAAGTAAATTTAAGTTTTTTTCCTTTACTTTGTGGAGGCAATATGTGCACCGTGTATCTATATAATCGTCCTTTTCCTTCATTCTTTTTTTTATTTTAATATTGTATCAATGGTGGGAGATACAAGCGAATCACATCAAACAGTCTAAAGGATGTGACTATAAAGAACATAAATCACAGACAAATTGTTCGAGAGAGAGATACAATATATATATATGATTTTTTTTGTTCTATCTCAATGTAGTACACTCAATATCATGTTTAGTGTATATATGTGTGCTAGGTAAGCTTTTTTTGATGGGGTCAAGGGGAAAATGCCCCAAGAAGGAAAACAAACTAGAAGCCTCTAGGAAACACAATCCCTACAAAGTCAACCTTAAAGGCATCAGCAACTCTAAGGAATCACACCTCAATATTGTAAAATTGATTCTTAGATATCTTATCCGCACCACTAATACTGGTCTCTACTCTAGTATTTGAAAACTAGAATTTGTAGTCTGGTTGGTTATTTAGTCTCTGGCTTTGTTGATTATACAAGATGGATAAGTAGAGCACTACGGAAACATGTCACATTTTTCAAAACTTATTGACTTTTTACTTTTTAACATAGTAAAAAATAGCAAGGGAGATTAGCGTTACCCACAATCGATGTTTAGTATATAGTAACTAAAAGTTGTTGTGGAGAAATCATTTGGATGGAATAAGAGCCTCTAAACTATGAAGTAATGCTTCATCAAGATGTGATAACACTAATGCAATCAAGTTAACTAAGAACCTATTTATAAGGCCCGACGCAATTGGCAAATACCGAAATTATTAGACCGAGGGCAATTGTTTGTGTAAAGACAAAAAAAGAAGTTAACTAACAATTTAACTAAGATGACCATGTATTTAAATTTGTTGATCAGATATCTTTACCAAACTATTGTTAAAAATAATTCTTTTACACATTAAAAATGAATTAGACATTCTAGACATATTATTTTAAACATTAATTAAAATTTTCTATTTATATTATTTTATATTTATATAAGTTAGTTGAACAGTTAAATTTTACACCTACAAGTCTAACTTATTCGTTATTAGCACTATCTTTACCAAACAAGACATAATGTGCAAATATCATGTTAATAAAATCTACAAAATACAATGTGATTTTGTAAAAGAATTATGTACTCGTACCTAATGACAAATTAAGTAGTAGTTGTACACTAGCTGGCAAGTAATCTGTGTCCGAACAGTTATGGCTTATGGGGATCCTTTGACGACAAACCACGTATACTCCTATCTATGATGCCGCCGAATAATTAATAATTAATTAACTACAGGTAACACGTGTTCCTGTTTCTTAACTAATGCTAGTAACACTAAACACTTTCTAAGCAAGCTTTCAGCTACTTGCTATTAAAATCCCCAACACTCACTCACTCACCCACCGTCGTAGCTGCTATTCACTGCTAACT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01301.22	Glyco_hydro_35	31	336	1.10E-114
PF17834.4	GHD	344	415	2.50E-29
PF02140.21	Gal_Lectin	769	843	1.10E-14

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GH35

Gene Ontology

GO term	Description	Category
GO:0004565	beta-galactosidase activity	Molecular Function
GO:0005773	vacuole	Cellular Component
GO:0005975	carbohydrate metabolic process	Biological Process
GO:0030246	carbohydrate binding	Molecular Function
GO:0016020	membrane	Cellular Component

InterPro

InterPro term	Description
IPR019801	Glycoside hydrolase, family 35, conserved site
IPR001944	Glycoside hydrolase, family 35
IPR017853	Glycoside hydrolase superfamily
IPR031330	Glycoside hydrolase 35, catalytic domain
IPR008979	Galactose-binding-like domain superfamily
IPR043159	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily
IPR000922	D-galactoside/L-rhamnose binding SUEL lectin domain
IPR041392	Beta-galactosidase, beta-sandwich domain

trEMBL

trEMBL term	Description
A0A0R0KAT4	_

SwissProt

SwissProt term	Description
BGAL3_ORYSJ	Beta-galactosidase 3

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G63810	beta-galactosidase 10
Medicago sativa L.	MsG0880042551.01.T03	_
Oryza sativa L.	LOC_Os01g65460.1	beta-galactosidase precursor, putative, expressed
Cucumis sativus L.	Csa017258	_
Glycyrrhiza uralensis Fisch.	Glyur000614s00017207.1	_
Codonopsis lanceolata	Cl_chr03_55740T	_
Arachis hypogaea L.	AH18G32680.1	Beta-galactosidase 10 like

Expression pattern