Gene detail

Detail information of Am03G010200.1 Annotation

Gene ID	Annotation
Am03G010200.1	Glycosyl hydrolase family 35 protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G010200.1	mRNA	Chr03	27565965	27572742	+

Sequences

CDS:

>Am03G010200.1
ATGGAAAAATGGGTGGCTTTGGTGATGCTTATGTTGGTGTGGTTGAAAACAAGAAGTGGCGTTAAAGCAGAAGAGGTGAGATACGATGGAAGATCTCTTATCATTGATGAGCAGAGAAGAATTCTGTTCTCCGGTTCTATTCATTACCCTCGCAGCACCCCTCAGATGTGGCCGGATTTGATAGCAAAGGCAAAAGAGGGAGGGTTGGACGTGATTCAGACTTACGTCTTTTGGAATCTACATGAACCCCAAACTGGCAAGTATGATTTCAGCGGTAGATATGACTTGGTGAGATTCATAAAGGAAATTCATGCTCAAGGATTGTATGTTTGCCTCAGGATTGGACCTTTCATCGAGAGTGAATGGACATACGGGGGATTCCCATTTTGGTTACATGATGTCCCTGGTATTGTCTATCGAACAGACAATGAACCATTCAAGTTCTACATGCAAAATTTTACGACAAAAATTGTGAACATGATGAAAGCAGAGGGATTATATGCTTCGCAAGGAGGCCCAATTATAATGTCCCAGGTTGAGAATGAATATCAAAACATCCAAAAGGCATTTGGAACAGCAGGATCGCAATATGTTGAATGGGCTGCAAAAATGGCGGTGGGCCTTGAGACCGGTGTACCATGGGTTATGTGCAAGCAAACTGATGCTCCTGATCCCGTGATCAATACATGCAACGGAATGAAATGTGGAGAAACTTTTACTGGACCAAACTCCCCCAATAAGCCTGCCTTGTGGACAGAGAACTGGACATCTTTCTATCAAGTGTATGGTGGATTGCCATACATAAGGTCAGCTGAAGACATTGCATTTCATGTCACTCTTTTTATTGCAAGAAATGGAAGCTATGTCAACTATTATATGTACCATGGTGGAACTAACTTTGGGAGAACAAGCTCTGCTTATATCATAACAGCCTATTATGATCAAGCCCCACTTGATGAATATGGTTTGTTGAGGCAACCCAAATGGGGACATTTGAAAGAGTTGCATGCTGCAATCAAATCTTGCTCTACCACTTTATTACAAGGAGTGCAGAGCAACTTTTCTTTAGGTCAAATGCAGGAGGGTTATGTTTTTGAAGCTGAAAATGGAGGAGGATGTGTTGCATTCCTTATAAACAATGATAGAGTAAATAAGGTCACTGTCCAATTCCACAACATATCATATGAATTGCTCCCCAAGTCAATAAGTATCTTACCAGATTGTCAAAACGTTGCTTTTAGTACTGCAAATGTAAATACGACAAGCAATAGAAGGATCATAACTCAGACACAAAATTTCAGCTCAGTGGATGAATGGCAACAATTCCAAGATGTCATTCCAAACTTTGATCAAACCTCCTCACTAAGATCAAACTCATTCCTTGAGCAAACGAATACAACCAAAGACAAATCTGATTACCTTTGGTATACTCTTAGGTTTGAAAATAGTTTATCCTGCAGCAAACCAACACTTCGAGTTCAATCTTCTGCTCATGTTGCCCATGCTTTTGTGAACAGCACATACATTGGAGGGATGCATGGAAATCATGATGTGAAATCATTCACCTTAGAGTTCCCTATTACATTAATTGAAGGGATAAACAACCTTTCTATACTAAGCGTTATGGTTGGACTCCCGGATTCAGGGGCATTTCTTGAAAAACGATTTGCTGGTTTAAACAATGTGGAGCTTCAGTGCAGTGAAGAAGAATCTCTTAATTTGACCAATTCTACCTGGGGATATCAGATTGGATTAATAGGGGAGCAATTAGAAGTATATAAAGAACAAAAAAGCAGTGATGATATAATTGAATGGACTCAACTGGGCAATATAATGGAGCAGTCTCTCACTTGGTACAAGACCAGATTTGACACACCAAAGGGAGATGAGGCTGTTGTCTTGGATCTTAGCTCAATGGGAAAAGGTGAGGCTTGGGTAAATGGAGAAAGCATTGGTCGCTATTGGGTTTTATTTCATGATTCCAAAGGCAATCCTTCACAATCATTGTATCATGTTCCACGGTCCTTCCTTAAAGACATTAATGGAAACAAATTGGTTTTATTGGATGAAGGTGGTGGGAACCCTCTTGATATCTCCTTGAATACTGTTTCAGTCACAGATTTACATGATAACTTTTCTAAATTACCATTCCCCACCACTGCTTGA

Protein:

Promoter(3k):

>AM03G010200.1
AGAGGTTGAAACACCTTATTTGGCTAGCAAAGATGTGGACGTCCTGGCTAAAAACAAATAAAGTTATTTTCATTAATGATAGTGCAGGTTTTAGTGTTGTCATTACAAAAATAAAATTAGTCTTATTAGGGGTGGTTTGTTGCTCGAAAGGGTAGAAATTCTGGCCTGTCTTTTGTTTTGCAGCTTGGTCCACAAGTCATGTAAATTGTCTCATGTCTCTTTAAAGGCCCGTAATTTATCTCAAGAATCTCTAAGTTCTATATAGATGTAAATAAGTTCAAGTATTCCTTATTTTCCCCCTTTTTTTGTTTTCTTCCCCAAAACTCCCCCTCCCCTCATTTTCCCCCTTTTCTTCCTTATTTTTTTTCTTCATACTTTTATATTTTAGGGGTACTCTAGATTCTGTGTATGGATTATGACTATAGATTATGTGTATGGAATAATTTGCCCGGATTATGTCTGTACACTTTAATTTAGCTCTTAAGCTCGCAATTGTCTTTTTTATTTATTTTTAAACGAGGCTTTCTCATATTGCAATTTAGCCTATCAATTTTCTTACTTCCACAATTATGTATTTACTAGAGCTTCTACCCCGTGCAAACACGTGATTATTATGAGAAATGAAAACATTTAATTATGATTGTTTAGATTAAAATTAATAGTTCAGATTACGTCATTAATTACAAGATCTCGTATGATTGTTTCCTTTTTAATTAAAGATCACAGGAGATGTTATAATTAATAACGTAATCTACACCGTTGATTTTAATCTAACGGTTATGTTCTGATTTCTCATAGTAATCCAGTGTAGTGTTGTGATCTGAGTCGTCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCTTGTCAAAAAAATTATATTTTATCAAAGGAAATACAAACTTAGATAAATATATAATATACTCCTTCGTCTCATATTATATGATGTTTTGTCCATTTCACACAAATTAAGAAAAGTAGTTAATTTTGTATGGGAAAAAGAAATTTTGAGTTACTTTACAAAATTATCCCTCATTGAGAAGATAAATTAATAGAATTGAAAGAAAAGAGATTATTAAATGAAGGGTACGATAGGAAAAAAATATTAATAATGCATTGGTATTGTAAAATGTCATATAATTGTTGGAATTTGCTAACATTTGCTTGGTTTTCTTTCAGGTTACAAACATCAGATAAAAGGGGTGCAATTAGCACTTCTCAAGCCCACTTGGCCCAGCCCAACTTCTCACACACCTGCCTTTCAAACCAAGATTTACGGAAGCAGATTTTTTGCGCACCCGAACCCGGTGCATACGGGTCAACACGCGGATCTTTTTTACCCGGAGTATAAAAGGCTTACTTTGACCTAACTGGTCAGATTTTTCAAGACTCTCCTCTCTCTTCTTGCTCCTCTGCACTGTTCCTCTTCTTCCTCGCCTCTTCTCTGGTTCTGGTTCTTCTTCTTCTTCTGTGTGATTGAAGCTTCCAAATGCTTCAATCACTTCGTAGATGATGCGCTGTGGTTGTTTACTGAACAACCTGTTGAAGTTGTACACAAAGTTAGAGGTTTTCACGAAACCCTAGTTTCGTATCTCAGCTTCAATGGCCTCCTTCTCCCTGGGTTTTCCACCGGTCACCACCACGAAGGTAAATCACTGAACTGATCTTTGAAATCTTTCTTTTCTTGTGGTTTTGCTTTGATTCAGACACTGTTGCAGAAACCCTAATTTCTGCTTGTTGATGTTTCAGGTACACAGCTTCTGAGGTTTTGTTGCGGATGTAACAACGAAGGTACGAATAGCACAAACTTTGCTATTTCACTTTGTTTTACACTTTATCTCTCAAAAACCTAATTTCCTCTTTACTATTTTCTTTGAATGAACCACGAATGGCTGAAATGATAACCTGAGAGTGTACACAGGATTTCAACACTATGAAATCCTCAACCAGTGACCACTTTCACAGGTAATTTCTTCTCTTTTCCTGTCTTTCTGTTTCTGTTCTATCTATTCTGGTTGTAATACTTAGAACAACACCTAACTTGTATTGTTTCTCTTGTTTGCAAGGTGAACACTCTTTGAACACACACTCAAACTCTCACGCCCAGAACTCAAGAAAGAGATACACAGAAAGAGATACACTGAAGGGAAAACAGAGAAGAAAACTTGAGAAAATGTAAAGACTTTATTAACTTGTAAAACTGAAAACTATAAAATTCAGTGTATGTACATATGTATTTATAGGCTTTCACTGGTCAATCATAGCTGTTAGTGAGAGTTTGTTGTAGCTAACAAACTTAGTTTGTTAATCAGTTTAACAAACTAATAGTTAGTTAGTAACTAACTTTGTTACAGATGTAAGCAGGGACTCATTTGATATAATTCCAACAGCTATATCTGTTTTTGAAAAATAGCTGTTAGAATTTTCTAGGGTTTTGCTTAGAAAAACCAATAATAATATGGGACAACTTTTTTGTGCTAGAACGACATATAATATGGAAGAGAGAGAGAGTAATTAACTATTATGATTTAATATTTATCTTTATAATTTTTGGATCCTTTGAATGGTTTTCTAGATGTGTCCCTTATTGTAAATAAATAATTTAAAATAACCTATGAATATTTTTTAGGAAAAACCTATGAATGCTGGTAATGCGTAAGTATAAGTAAGAGTGGGGACAGACAATGAAAAGAAAACTAAAACTAGTCCCTTCACAATTAATATTCTACTCACCCACTCAATTGTGACTCTCACTCTCACATGTTTCTTTCCCCCCTCTAACCAGCAACACTCCTTTGCTTTTCTTATTTTTTATTTATATATATAAAATATATTTTTGGGGCCATGCCATGTGTAAAAAATATTGTACTTGCCGCCTATATGTTGTCATATATATAGGCTCAGCCCTCAGAGGCAGAGAGGAAGATAAATTAAGAGGTGAGAGTTAGTTAATTATATTAGTGAAGAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01301.22	Glyco_hydro_35	32	338	4.00E-112
PF17834.4	GHD	346	418	6.70E-25
PF02449.18	Glyco_hydro_42	54	202	7.20E-12

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GH35

Gene Ontology

GO term	Description	Category
GO:0005975	carbohydrate metabolic process	Biological Process
GO:0005773	vacuole	Cellular Component
GO:0009827	plant-type cell wall modification	Biological Process
GO:0048354	mucilage biosynthetic process involved in seed coat development	Biological Process
GO:0016020	membrane	Cellular Component

InterPro

InterPro term	Description
IPR019801	Glycoside hydrolase, family 35, conserved site
IPR001944	Glycoside hydrolase, family 35
IPR017853	Glycoside hydrolase superfamily
IPR031330	Glycoside hydrolase 35, catalytic domain
IPR008979	Galactose-binding-like domain superfamily
IPR041392	Beta-galactosidase, beta-sandwich domain

trEMBL

trEMBL term	Description
A0A445KAB1	_

SwissProt

SwissProt term	Description
BGAL6_ARATH	Beta-galactosidase 6

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G63800	Glycosyl hydrolase family 35 protein
Medicago sativa L.	MsG0880042551.01.T03	_
Oryza sativa L.	LOC_Os05g35360.1	beta-galactosidase 7 precursor, putative, expressed
Cucumis sativus L.	Csa020429	_
Glycyrrhiza uralensis Fisch.	Glyur000614s00017207.1	_
Codonopsis lanceolata	Cl_chr07_21670T	_
Arachis hypogaea L.	AH08G27810.1	Beta-galactosidase 6 like

Expression pattern