| Gene ID | Annotation |
|---|---|
| Am03G009700.1 | Clp ATPase |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am03G009700.1 | mRNA | Chr03 | 26152621 | 26159502 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF07724.17 | AAA_2 | 653 | 828 | 7.70E-54 |
| PF17871.4 | AAA_lid_9 | 457 | 529 | 4.10E-28 |
| PF10431.12 | ClpB_D2-small | 834 | 914 | 2.90E-22 |
| PF00004.32 | AAA | 314 | 420 | 9.40E-19 |
| PF00004.32 | AAA | 658 | 776 | 9.40E-19 |
| PF07728.17 | AAA_5 | 658 | 779 | 4.90E-18 |
| PF02861.23 | Clp_N | 189 | 234 | 1.40E-17 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0016020 | membrane | Cellular Component |
| GO:0005524 | ATP binding | Molecular Function |
| GO:0065003 | protein-containing complex assembly | Biological Process |
| GO:0006508 | proteolysis | Biological Process |
| GO:0008233 | peptidase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR041546 | ClpA/ClpB, AAA lid domain |
| IPR028299 | ClpA/B, conserved site 2 |
| IPR018368 | ClpA/B, conserved site 1 |
| IPR001270 | ClpA/B family |
| IPR004176 | Clp, repeat (R) domain |
| IPR036628 | Clp, N-terminal domain superfamily |
| IPR019489 | Clp ATPase, C-terminal |
| IPR003959 | ATPase, AAA-type, core |
| IPR003593 | AAA+ ATPase domain |
| trEMBL term | Description |
|---|---|
| A0A8B8L513 | _ |
| SwissProt term | Description |
|---|---|
| CLPD_ARATH | Chaperone protein ClpD, chloroplastic |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G51070 | Clp ATPase |
| Medicago sativa L. | MsG0380016997.01.T03 | _ |
| Oryza sativa L. | LOC_Os02g32520.1 | ERD1 protein, chloroplast precursor, putative, expressed |
| Cucumis sativus L. | Csa007453 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000282s00015753.1 | _ |
| Codonopsis lanceolata | Cl_chr02_09280T | _ |
| Arachis hypogaea L. | AH18G33880.1 | Chaperone protein ClpD, chloroplastic like |