Gene detail

Detail information of Am03G008690.1 Annotation

Gene ID	Annotation
Am03G008690.1	ZIM-like 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G008690.1	mRNA	Chr03	22651331	22660109	+

Sequences

CDS:

>Am03G008690.1
ATGGCTGCACAACCTCTGCAGTTCGAGGACTCTACAATTCCGGTTGTGGTTGACGACAACAACGGTGATGATGCTATGGATGAGTTAGACTTGGAGGAGGCAAACGTGAATTCAGTAAACGTTGCAGCGAGTGACAATTATGACGCTGTCGTTTTGCCTTCGCGTACTAGTGAACTCACTCTTTCTTTTGAGGGTGAAGTTTACGTTTTTCCCGCTGTCACACCTCAGAAGGTGCAAGCTGTTTTGCTTCTTTTGGGAGGACGTGGTGTGCAGGCAGGCATGTCTACAGTTGAATTACCACTTGATCACAGTAACAGGGGCATGGGCGATGCTCCAAAGCGTTCAAACCTTTCACGAAGAATAGCCTCCTTGGTCAGGTTCCGCGAAAAACGCAAGGAAAGGTGTTTTGACAAGAAAATTAGATACACCGTAAGAAAAGAGGTTGCACAGAGGATGCATCGGAAGAATGGACAGTTTGCATCGTTGAAGCAAGGCCCAGGTTCATCTAGCTGGAATTCAGCATGCGGTGCCGGTCAAGATGGCACTCCTAACACCGAATCTCTACGTAGATGTCAACATTGTGGTATCAGCGAAAATAACACTCCTGCAATGCGCCGCGGGCCAGCTGGACCAAGAACTTTATGTAATGCATGTGGCCTCATGTGGGCTAACAAGGGGACACTTAGAGATCTCAGTAAGGGAGGAAGAAATCTTCCTGCCGAGCAAAGTGATCCGTTGCAGGACACTCCTATTGATGTCAAGCCTACTGTTCTTGAAGGGGAGTTGCCTGTCATCCAAAACGAGCAAGGTATTTCTGAAGATCTTCCCAGGGCCATTACTGCTGAAGGTTCTAATAATCATGCTGAAAACCCCAGTGATGAGGAATTGCCAGTATCTGCAGAACACTTGACAAATACTCTCCCACTGGGAATTGATCATTCTTTGGCAAATGATGAGGAGCAGGAACCTCTGATTGAGCTTTCTACTTCAGATACAGATGTTGACATCCCTGGAAAATTTGATTAG

Protein:

Promoter(3k):

>AM03G008690.1
TCTATTAATTCAAAGAGTACTAAGTACGAAACAATACGAAACAAAATGCAAGAATACTCACAAAATAAAGCAAAACGGAAATGTCTGAACACGAAGCAGAATAAAGAAGAAATTCCAGGCCACACTATTCTTTTGGCATATAATAACAACATTTCTCTAAAAATTGAGAAGAGGACTGCTATTCAACGAATAGCGGTTAACGAAATGTCAGAAAAATACAGGATTGTTGAATTTGAAAACTTCACGCACACGTGTTACCAACTTATGTTTCTTTTAGTACGAGGCGTCGAAATGGATGGATCGAATGAATTTGAATTTGGATTTTAATGGATGAATTGGAAAAATCTATTTATCTATTTAAAGTGTAGCGAAGATATCCAATTCATCCATTAGTATTTTTAACACATAAAAAGTCTTTTAATAAAAAATACTTTTAATTATAAATTTAAATTTTTTTACAGCAGAATATTAAATTTTTCTACTGCAGAATTATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTATAAATATGGTGTTGGTTTGTGGTGGCAGCGACATCCGTGGCGGAGCTCTGGTGGCGGCGTCCACGGCAGATCTCTGGCGGCCTCCTCCAACGCCTACGCCGGAGCTCCAGTAGCCAGCCGTGTTTGACAGTGGCGCTCCTGCGGCCGACGGGGTTGGTGGCGGTGTTCCGACAGCCAACTAAATTTGTGTGTGTGTATGTGTGGCACAAGTGGTAAGTTGCTTGGGCCCATTAAGCATTTGGTCAGGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTGTTTCTGAAATTTTTTTTTTTTTTTTGGAATTTTTTTTTTAAAAAAACTAAAAACTGTTTTTAAAAATATTTTTTGGTAAAAAAAGTATTTTTCATTATCGTTCAATAGATTTTGATTTATAGTTATTGTAATTCAATAAATTTAAAAAAAAAATAATGGATGAATCACAACCATTCATAAAGTTAAGCGGATAGAGGCAAAAAAACCACTGTAGCCAAATAAAAAATTTATTTACCAAAATAACACTCTTTCTAGATTATTTACCAAACTAGCACACATCCAAAAATTAGGCCAGAAGTCGCCCCCAAGGGAAACGACTTCTTGACTGCATTTTTGCAATTTTTTTTTAATTTTAGAGTGCAGAAGTCGCCCCCTGTGGGATAGACTTCTAAACTGTGTTTTTTAATTTTTTTTTACTTTATATTAATTTAAATTAAGTTATATTAATTAATTTAACTAATTTAGAAAATTAATATTTAGAATTTCAAATTAATTATAAATATTATGGTGATAAAAAAAAGTATCGGCAACATCAAGACCATTGAAAAAAACACAAAAAAAACCGTAATTTGACACAAACAAAACACTGTGCACTATGCACAGTGTTTTTATATATATAATTTTTTATTTAAAAAAAATATCTACCCTGTAGAAGAGATATAAAACTATCGTGTTGGTGGTGCCCGGCGATTCCGCCTTGAACGCTGTTGTACTGCTGGTATTTCTTTATCAGCGGGGGTAGGTGCAGGTGTATAATACACCAAACAGATTATAGAACATACTTCCGACACTAATCAACAGTCAAGATCTTGCTGACACTAATAAACGGTCAAGATCTTGCCGACACTAATAAACGGTCAATTTTATTAGATTTTTAGTGGTGTTGTTAAAATTTTTTGATGACGTTTGGCTTGTTTTTTATTTTCTGTCGTAATTTTCGCATTATACGGCTAGCGGCGACGACAATATGTTCTATAATCTGTTTGGTGTTCACACTGGTACGCTCGAATCAGTTGCATATCTTCAGAGGCTTTAGGAGCAGGCCAATGCTATCATGTGGAACTGGCCACCTCCATGTGGAACTGGCCATGACCAGACTGGCCACCACCATGTGGAATTGCCGAAACTAATAAACGGTCAAGATCTTTTTAAAACTACCGTGTAGATTTTTTTAAATAAAAAATTAGATATATAAAAACACCGTGCATAGTGCACAGTGTTTTGTTTGTGTCTAATTACGGTTTTTTTTTTTGTGTTTTTTTAATGGTCTTGATGTTGCCGATACTTTTTTTATCACCATAATATTTATAATTAATTTAGAATTATAAATATTAATTTTCTAAATTAATTAAATTAATTAATATAACTTAATTTAAATTAATATAAAGTAAAAACAAATTAAAAAACACAATTCAGAAGTCTCTCCACAGGGGGCGACTTCTGCACTGTAAAATTAAAAAAATTTGCAAAAATGCAGTCTAGAAGTCGTTTCCCTTAGGGGCGACTTCTGGCCTAATTTTTGGATGTGTTATAATTTGATAAATAATCTAAAAAATGTGTTATTTTGGTAAATAAATTTTTTATTTGGGCTAAGGTGGTTTTTTTGCGGCGGATAGATCCGATCCAATTAATTGGATTTTTTATTTTGTAATGAAAATATGGTTGAATTTTGTTATGAACGGACAGGACGAATGTTGGACAATTATACCATTTTGACGAAGCATTTGTCCTTCGAACTACACGAAAGAATCAGCGCCGTACGATTGTTTTTTCTCGGATCTTGATGCTTTTCTTTCTCGTACCTTGAATAAGGGGAACTGGGAAGAATAAAAAATCACGACATGTTGACGACGTCAACCAAAATTTAAGTCTGCTCGAGTTTGTTGGCCTCGCTTCTGCTCTACTGATCCTTTGCTTCTTCAATTTCATCTCTTCAGAAAAGCCTTATCAGAGCTACCGAATTGAATTTTCCCAATTATGGAATTGATATTTGAGTTTGATCAAAGTAGCAAGCTTCAAAATTAGGTTTTCTACTCTCCTAATCAGAGACAACCAGCCACGTGGTGAAATTA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF06203.17	CCT	120	161	9.60E-14
PF00320.30	GATA	191	227	4.80E-13
PF06200.17	tify	54	86	4.00E-10
PF09425.13	Jas_motif	121	142	6.60E-07

Gene family

Gene family	Subfamily
Transcription Factors Family	C2C2-GATA
Transcription Factors Family	Others
Transcription Factors Family	Tify

Gene Ontology

GO term	Description	Category
GO:0043565	sequence-specific DNA binding	Molecular Function
GO:0005634	nucleus	Cellular Component
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0008270	zinc ion binding	Molecular Function

InterPro

InterPro term	Description
IPR013088	Zinc finger, NHR/GATA-type
IPR000679	Zinc finger, GATA-type
IPR010399	Tify domain
IPR045280	GATA transcription factor TIFY-like
IPR010402	CCT domain

trEMBL

trEMBL term	Description
A0A8B8LDQ8	_

SwissProt

SwissProt term	Description
GAT24_ARATH	GATA transcription factor 24

KEGG

KO	Description	Enzyme
K13464	jasmonate ZIM domain-containing protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G21175	ZIM-like 1
Medicago sativa L.	MsG0380017048.01.T01	_
Oryza sativa L.	LOC_Os03g47970.1	GATA transcription factor 25, putative, expressed
Cucumis sativus L.	Csa003866	_
Glycyrrhiza uralensis Fisch.	Glyur000757s00023973.1	_
Codonopsis lanceolata	Cl_chr02_27150T	_
Arachis hypogaea L.	AH10G05130.2	GATA transcription factor 24 like

Expression pattern