| Gene ID | Annotation |
|---|---|
| Am03G007060.1 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am03G007060.1 | mRNA | Chr03 | 18095307 | 18098610 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00331.23 | Glyco_hydro_10 | 397 | 654 | 6.30E-47 |
| PF02018.20 | CBM_4_9 | 28 | 165 | 1.10E-40 |
| PF02018.20 | CBM_4_9 | 199 | 342 | 1.10E-40 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | CBM22 |
| GO term | Description | Category |
|---|---|---|
| GO:0031176 | endo-1,4-beta-xylanase activity | Molecular Function |
| GO:0000272 | polysaccharide catabolic process | Biological Process |
| GO:0045491 | xylan metabolic process | Biological Process |
| GO:0016998 | cell wall macromolecule catabolic process | Biological Process |
| InterPro term | Description |
|---|---|
| IPR031158 | Glycosyl hydrolases family 10, active site |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR001000 | Glycoside hydrolase family 10 domain |
| IPR044846 | Glycoside hydrolase family 10 |
| IPR008979 | Galactose-binding-like domain superfamily |
| IPR003305 | Carbohydrate-binding, CenC-like |
| trEMBL term | Description |
|---|---|
| A0A1S2YAL4 | _ |
| SwissProt term | Description |
|---|---|
| XYN1_ARATH | Endo-1,4-beta-xylanase 1 |
| KO | Description | Enzyme |
|---|---|---|
| K01181 | endo-1,4-beta-xylanase | [EC: 3.2.1.8] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G58370 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| Medicago sativa L. | MsG0380017249.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g47010.1 | glycosyl hydrolase family 10 protein, putative, expressed |
| Cucumis sativus L. | Csa016071 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000605s00024926.2 | _ |
| Codonopsis lanceolata | Cl_chr07_40640T | _ |
| Arachis hypogaea L. | AH08G09540.2 | Uncharacterized protein like |