| Gene ID | Annotation |
|---|---|
| Am03G006440.1 | dicer-like 3 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am03G006440.1 | mRNA | Chr03 | 16692207 | 16701750 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00636.29 | Ribonuclease_3 | 1084 | 1218 | 3.60E-46 |
| PF00636.29 | Ribonuclease_3 | 1293 | 1401 | 3.60E-46 |
| PF03368.17 | Dicer_dimer | 583 | 667 | 4.40E-28 |
| PF14622.9 | Ribonucleas_3_3 | 1275 | 1369 | 1.10E-23 |
| PF00271.34 | Helicase_C | 409 | 516 | 2.80E-18 |
| PF04851.18 | ResIII | 37 | 212 | 2.50E-16 |
| PF00270.32 | DEAD | 50 | 211 | 2.20E-15 |
| PF02170.25 | PAZ | 905 | 1042 | 6.10E-14 |
| Gene family | Subfamily |
|---|---|
| Epigenetic Regulators | DCL3 |
| GO term | Description | Category |
|---|---|---|
| GO:0003677 | DNA binding | Molecular Function |
| GO:0008270 | zinc ion binding | Molecular Function |
| GO:0016441 | post-transcriptional gene silencing | Biological Process |
| GO:0045087 | innate immune response | Biological Process |
| GO:0051607 | defense response to virus | Biological Process |
| InterPro term | Description |
|---|---|
| IPR036389 | Ribonuclease III, endonuclease domain superfamily |
| IPR000999 | Ribonuclease III domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR036085 | PAZ domain superfamily |
| IPR003100 | PAZ domain |
| IPR006935 | Helicase/UvrB, N-terminal |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR014720 | Double-stranded RNA-binding domain |
| IPR038248 | Dicer dimerisation domain superfamily |
| IPR005034 | Dicer dimerisation domain |
| trEMBL term | Description |
|---|---|
| A0A3Q7YFL5 | _ |
| SwissProt term | Description |
|---|---|
| DCL3A_ORYSJ | Endoribonuclease Dicer homolog 3a |
| KO | Description | Enzyme |
|---|---|---|
| K11592 | endoribonuclease Dicer | [EC: 3.1.26.-] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G43920 | dicer-like 3 |
| Medicago sativa L. | MsG0380017328.01.T03 | _ |
| Oryza sativa L. | LOC_Os04g43050.4 | Dicer, putative, expressed |
| Cucumis sativus L. | Csa013176 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000385s00019808.1 | _ |
| Codonopsis lanceolata | Cl_chr08_24270T | _ |
| Arachis hypogaea L. | AH20G26670.1 | Endoribonuclease Dicer homolog 3a like |