Gene detail

Detail information of Am03G005430.1 Annotation

Gene ID	Annotation
Am03G005430.1	cellulose synthase 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G005430.1	mRNA	Chr03	14128275	14134089	+

Sequences

CDS:

>Am03G005430.1
ATGGAAGCATCCGCTGGCATGATTGCTGGGTCCCACAAAAAAAACGAGCTTGTTCGGATTCGTCACGATTCTTCCGACAGTGGGCCTAAACCTTTGAAGGATTTGAATGGACGAGTCTGTCAAATATGTGAGGATAATGTTGGATTAACGGCAACTGGTGATGTGTTTGTTGCTTGCAATGAGTGTGGATTCCCAGTTTGTCGTGCTTGTTATGAATATGAGCGAAAGGATGGGAATCAGCGTTGTCCCCAATGCAAGACTAGATACAAGAGGCATAGAGGGAGTGCTCGAGTGGAGGGAGATGAAGAAGAAGATGATGTTGATGATATAGAGAATGAGTTCAAATATGCCAAGGGAAATGACAAGGCAAGGCGTCAGTGGGAAGAAGATGCTGAACTCTCTTCTTCTTCTAGACGTGATTATCAGCAACCTATTCCCCTTCTCACCAATGGCCAAACGATGTCTGGTGAGATCCCGTGTGCTACACCAGATACTCAATCTGTCCGAACTACTTCAGGTCCTTTGGGCCCATCTGAGAAAGTTCACTCACTTCCTTATCTTGATCCGAGGCAGCCAGTTCCAGTGAGAACTGTGGACCCAACGAAGGACTTAAACTCTTACGGTTTGGGAAATGTCGATTGGAAAGAGAGGGTTGAAGGTTGGAGACTCAAGCAAGAGAAGAATATGGTACAAATGACTGGTAGTAGATACACTGAAGGGAAAGGAGGAGACATTGAAGGAACTGGTTCTAATGGAGAAGAACTTCAAATGGTCGATGATGCTCGACAACCTATGAGCCGTATCGTACCTATTCCTTCATCTCAGCTGACCCCTTATCGTGTTGTCATCGTACTGCGGCTGATTATTCTTGCCTTTTTCTTACAATATCGTGTAACTCACCCAGTTAAAGATGCATACCCACTGTGGTTGACATCCGTTATCTGTGAGATTTGGTTTGCTTCTTCCTGGATTTTGGATCAGTTTCCAAAATGGTCTCCCATTAATCGTGAGACTTATCTTGAGAGGCTTGCTTTAAGATATGATCGCGAAGGAGAACCATCACAGTTGGCTCCTGTCGACATTTTTGTTAGTACGGTGGATCCCCTCAAAGAGCCACCTATTGTAACTGCAAACACTGTTTTGTCTATACTTTCTGTTGATTACCCAGTCGACAAGGTTTCCTGCTATGTATCCGATGATGGTTCAGCTATGTTGACTTTTGAAGCCTTATCAGAAACAGCTGAGTTCGCAAAGAAGTGGGTGCCCTTTTGCAAAAACCATAATATTGAGCCAAGAGCCCCTGAGTTTTATTTTTCCCAAAAGATTGATTACTTAAAGGACAAGGTTCAACCTTCTTTTGTCAAGGAGCGACGGGCAATGAAGAGAGAATATGAAGAATTCAAAGTAAAAATCAACGCTCTTGTATATAAAGCTCAGAAGACACCAGAGGAAGGTTGGACAATGCAGGATGGAACCCCGTGGCCTGGAAATAATCCCAGAGACCATCCTGGAATGATTCAGGTGTTTTTAGGTCATAGTGGAGGGTTTGATACAGATGGTAATGAGCTGCCTAGGCTTGTTTATGTTTCTCGTGAGAAGCGACCGGGCTTCCAACATCACAAGAAGGCTGGAGCTATGAATGCTTTGATTCGAGTTTCGGCTGTCTTGACCAATGGTGCATATCTTTTGAACGTTGATTGTGATCACTATTTCAATAATAGCAAAGCTCTCAAAGAAGCAATGTGTTTTATGATGGATCCTCTTTATGGAAAGAAGGCATGCTATGTGCAATTTCCTCAGAGATTTGATGGCATTGACTTGCACGATCGATATGCCAATCGCAATATTGTTTTCTTCGATATCAACATGAAAGGTCAGGATGGTATTCAGGGTCCAGTCTACGTGGGAACTGGTTGCTGTTTCAATAGGCAGGCTCTGTATGGTTATGATCCTGTTTTGAGTGAGGAGGATTTGGAACCTAACATTATAGTAAAGAGTTGTTGGGGTTCTAGAAAGAAGGGACGAGGTGGCAATAAAAAGTACGGTGACAAGAAGAGGGGAGTTAAAAGAACCGAATCCACAATTCCCATATTTAATATGGAAGATATAGAGGAAGGTGTTGAAGGTTATGATGATGAAAGGTCACTTCTAATGTCTCAGAAGAGCTTGGAGAAGCGTTTTGGACAGTCTCCAGTTTTTATTGCAGCCACCTTCATGGAGCAAGGTGGCATTCCACCTTCAACCAACCCTGCAACTCTTCTCAAGGAAGCAATCCACGTCATCAGTTGCGGTTATGAAGACAAGACAGAATGGGGCAAAGAGATTGGATGGATTTATGGTTCTGTGACCGAAGATATCTTGACTGGGTTTAAGATGCATGCACGTGGTTGGATTTCCATCTATTGCATGCCACCTCGTCCAGCATTTAAGGGTTCTGCTCCTATCAATCTTTCCGATCGTCTCAATCAAGTTCTTCGGTGGGCCTTGGGTTCTATCGAAATCTTTCTAAGCAGACATTGTCCCTTATGGTATGGCTACAATGGAAGGATGCCTCATCTCATGAGACTTGCTTATATCAACACTATTGTCTACCCCTTTACCTCGATCCCTTTGATTGCTTACTGTACACTTCCCGCGTTTTGTCTCCTCACAAATAAGTTTATTATTCCCGAGATAAGTAACTTTGCCAGCATGTGGTTTATTCTCCTCTTCGTCTCCATTTTCACAACGTCAATTCTTGAGCTTAGGTGGAGTGGAGTCGGCATAGAAGACTGGTGGAGGAATGAACAATTTTGGGTCATCGGTGGAACATCTGCGCATCTATTCGCCGTGTTCCAAGGACTTCTTAAAGTACTTGCAGGGATAGACACAAATTTTACTGTTACATCAAAGGCATCAGATGAAGATGGAGACTTTGCAGAACTATATGTGTTTAAATGGACATCACTTCTCATCCCTCCTACAACAGTGCTTATTGTGAACTTAATAGGAATTGTGGCTGGAGTATCCTATGCCATAAACAGCGGTTACCAATCTTGGGGTCCACTATTTGGAAAGCTCTTCTTTGCTATATGGGTCATTGCACATTTATACCCATTCTTGAAGGGTCTATTGGGAAGGCAAAACCGTACACCAACAATTGTTATTGTTTGGTCTATTCTACTTGCTTCTATATTCTCATTGTTGTGGGTGAGGATTGATCCATTCATTACTGACCCCAACAAAGCATACAATGGTCAATGTGGCATCAATTGTTAG

Protein:

>Am03G005430.1
MEASAGMIAGSHKKNELVRIRHDSSDSGPKPLKDLNGRVCQICEDNVGLTATGDVFVACNECGFPVCRACYEYERKDGNQRCPQCKTRYKRHRGSARVEGDEEEDDVDDIENEFKYAKGNDKARRQWEEDAELSSSSRRDYQQPIPLLTNGQTMSGEIPCATPDTQSVRTTSGPLGPSEKVHSLPYLDPRQPVPVRTVDPTKDLNSYGLGNVDWKERVEGWRLKQEKNMVQMTGSRYTEGKGGDIEGTGSNGEELQMVDDARQPMSRIVPIPSSQLTPYRVVIVLRLIILAFFLQYRVTHPVKDAYPLWLTSVICEIWFASSWILDQFPKWSPINRETYLERLALRYDREGEPSQLAPVDIFVSTVDPLKEPPIVTANTVLSILSVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAKKWVPFCKNHNIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKREYEEFKVKINALVYKAQKTPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGFDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPLYGKKACYVQFPQRFDGIDLHDRYANRNIVFFDINMKGQDGIQGPVYVGTGCCFNRQALYGYDPVLSEEDLEPNIIVKSCWGSRKKGRGGNKKYGDKKRGVKRTESTIPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGRMPHLMRLAYINTIVYPFTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFVSIFTTSILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFITDPNKAYNGQCGINC*

Promoter(3k):

>AM03G005430.1
CCAAACAAAAGGGACAGGAAGAAAGAACTTGGGCTTGTAGCTTTGAGGCAGCCATTCGCATGTGTTGCTGTCCCATTTTTGCTTTATTATTATTTTTTTTGTACCCTTTTGTTTGTAATTAATTTTTGTACCATTTGTATTTAATTAAATTTTTTGTCCATATGCAAATAAAAGAGCTGACTTTTTTTGTACTATTCTGCTTTTTTTTTTTTAAATTTTTTGTTTATATGTGTAACACAAGGACAGCTAATAATAAAAAAAAACTGATTTCATTTTATTACCATTATTTATTATTATTTTTTTATGATAATAAAAGCGGTAAAAACAACGCGCACCGACGCGACGACTCACATGACTCGGAACGAAACGCGCATTCGCCTTAAGACTAGGGACACGTACGCGATTTGAATACGCACGCGCGCACGTTTTTAAAACCGATTTCATTCTATTCTCACTTTTCTAAAAACGGTAAAAATAAACGCGCACCGACGCAATTACTCACGACTCGAGACGAAATGCGCGCTCGCGTTATTCATTATTTCATTATTTATTTTTGGATTCTTTTTTCCTTTTTTTTTGAAAGCGAGCGCCAAACAAAATCGTTGCACGAGAGTGCCAAATACACCCGCATTTAGAACAATATGCGAAGCGATAAAATTTTTGGAATTTTTCAATTAGGCGGACAAAATTGGGGTATTACACCAGTCACCTTTTATCTGATGGATGACTAAGACTGAGTCCCCATATACATCGAGTCTTTTGACTTTCCATTCAAAGACCGCTTTGATGCCTAGGACACACACTTCATATTCTGCAATGTTATTGGTGCAATAGAAGCTTAGTCTAGCAGTAAATGGTATGAAGCGGTTATCAGGAGAGATCAACACAGCTCCGACCCCGTGCCCATACAGATTGGACGCGCCATCGAATGACATTCTCCACCTTTCGTTGTCTGGAGATTTCCCTTCTCCGAATAGAGCCATATGTCTTCATCTGGGAAATCACATTGCATTGATTGGTAATCTTCAATGGGCTGGTGTGCCAAGTATTCAGCTGGTGCAGAAGCACTAAGTGCAGAAGCATCTGTGGTGCAGAAGCATCATCTGTAGAAAAACTGAACAAACACATCAAACATTCCAATATATACACATAATGTTTTATTCATCACATAATTCCTTGAATGTTGTTATTTTACTAATATTACTATATTTAACACACTTTGTACTTGAGTTTAAAGCAATTTGTTGCGTTTAGAAGTATAAATAACTCTATATAAATTAGAGTTATCAGACAGCCATTAAGTATTTTGCATTAATTGTAAAAAAATTGTATTTTGCATTCAGAAGGATGTAAACAAAACAGCCCAAATCACAAATTCCAGGTTTCTATTTAAGCGGTTAAATGAGAAGAAGAAAATAATAAGAAAAATGGAAAACAACTTAAAATTAGGATTTTTTTTGTACCTGTCATAATATATAGTTGTCCCAGTAGTACTAGGTCTAGCAACAAGTAGAGGTGTTCAAAACCGAACCAAACCAATAGAAAATCGCAAACCGAAAACCGCAAAAAACCGTTTCTTATTGGTTTTGTTTGGTTTTTTTTTCATTGCACCGCGTGGTTCGGTTTGGTTCGCGGTTTTGATTTTAGAAACCGAACCAAACCAAACCAAACCGCAAGTAACACTAAGGCTTATTGACTTACAACTTTCCTTACTAACTTACTAGCCCAAATGCAACTAAACCCCAACTTTCACTCACTTACTAGCCCAAATCCAATTAATTATTTGACTAACTTACAAACAATCCATATTGTTATGCTATATTTAAAAATTACAATAAAATATTTAATTTAAATTCTTTTAAGTATTGTCTTAGTTATCTTAAAAAAAATTAAAAGAGAGTAGTTTATATACTACATATATTTGATTAGATTTTTTTCTTAAAGATTTATGTTAGCCATTGTTTATGTTAGTTAATTTTAACTTCGTTTTAAATTATGTTTTGTCTTGGAAAAACCGAACCAACCGAACCAAGTCAAACCACACTTGTTTGATTTGGTTCGGTTCGGTTCGGTTTTATTTTTAGAAGTCAACCGAACCAAACCAAACCGCATGTAATTTTATATTGCGGTTCGGTTCACTTTTTGTCTCAAAACCGAACCAAACCGCATCGCAAACACTCATCGAACAAGTGAATTCAAAAAAGTCCCAATTAATCCATGGAGCATTAGAAAATCATAGTTTTATCAAAACAGTCGAACACACGTTGTACGATTGGCTTTGACTTAAAAAAGGACAAAAAATTACCAAAAGAAAAAGGACCAAAAAGATGTTATTTATTTGTAAAAAAAGAAAGTAATGAATACTATTAATTTTTTTTTTACGGGAGTAATTAATATTAATATTTAAATGGAATTAGACAGCAGATTAATCGGAATTAGTTGTAATTTGGTGGTGCAATTATTGTCAGCGCGTAAATAGGGCAGATTTGTAATTTGGTTGACGATTTTGTACATTTTCATCTGACCGATTGGCACCGACAGCCAGTGAGATGAAAACTGGAAGCAACCGGTCTTCCGTCGGACAGCTGGTGCCACTTCAGCTAATATTCGGCTTGCCAAGTAACACATCCACTCGTGTCTTTATCCCAACAATCAACACGTGTACAAATGTCATTCGACGTTCTTAGAAGTACAGTAAGCTGAGCCGTACAAACTAGAGCTTAAACGGCTTGGGAAAAGAACCGGGAACCGATCCATCCGGTAAAACAAGAACCATAAAACAGACAGATAAAGAAAGAAAGGCAAGCCAGAACAGCAGTAGTTGTGTTGTTTGAGACCAGAGAGTGTCTGTGTGGAAGTGCAAGTGAAAGTGAAGAGAGAGAAAGAAAAAAAGATAGCGTGTTGAATGGGCGAAGATTTTCAGGCTTTGCCTTCAAATCTGAGCAGATCGTGAACTCAACTCCATCGATCTGCACCACTTTCTGTGTCTCAACATAGAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03552.17	Cellulose_synt	359	1074	0
PF14569.9	zf-UDP	30	107	3.80E-42
PF13632.9	Glyco_trans_2_3	776	879	7.50E-08
PF14570.9	zf-RING_4	40	90	3.00E-07

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT2

Gene Ontology

GO term	Description	Category
GO:0005886	plasma membrane	Cellular Component
GO:0046872	metal ion binding	Molecular Function
GO:0071555	cell wall organization	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0003677	DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR001841	Zinc finger, RING-type
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR029044	Nucleotide-diphospho-sugar transferases
IPR027934	Cellulose synthase, RING-type zinc finger
IPR005150	Cellulose synthase

trEMBL

trEMBL term	Description
A0A8B8LFR1	_

SwissProt

SwissProt term	Description
CESA1_ARATH	Cellulose synthase A catalytic subunit 1 [UDP-forming]

KEGG

KO	Description	Enzyme
K10999	cellulose synthase A	[EC: 2.4.1.12]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G32410	cellulose synthase 1
Medicago sativa L.	MsG0380017435.01.T01	_
Oryza sativa L.	LOC_Os05g08370.1	CESA1 - cellulose synthase, expressed
Cucumis sativus L.	Csa002307	_
Glycyrrhiza uralensis Fisch.	Glyur000785s00024164.1	_
Codonopsis lanceolata	Cl_C00052_unscaffolded_00160T	_
Arachis hypogaea L.	AH08G26670.1	Cellulose synthase A catalytic subunit 1 [UDP-forming] like

Expression pattern