| Gene ID | Annotation |
|---|---|
| Am03G004130.1 | RING/U-box superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am03G004130.1 | mRNA | Chr03 | 10677407 | 10678712 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13639.9 | zf-RING_2 | 117 | 160 | 1.00E-13 |
| PF12678.10 | zf-rbx1 | 127 | 160 | 3.70E-10 |
| PF13923.9 | zf-C3HC4_2 | 117 | 159 | 6.50E-10 |
| PF17123.8 | zf-RING_11 | 117 | 146 | 3.50E-09 |
| PF00097.28 | zf-C3HC4 | 118 | 159 | 6.80E-08 |
| PF12861.10 | zf-ANAPC11 | 118 | 163 | 1.40E-06 |
| PF13920.9 | zf-C3HC4_3 | 116 | 166 | 3.50E-06 |
| PF13445.9 | zf-RING_UBOX | 118 | 157 | 5.00E-06 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RING |
| GO term | Description | Category |
|---|---|---|
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| trEMBL term | Description |
|---|---|
| A0A9D5ACI3 | _ |
| SwissProt term | Description |
|---|---|
| ATL12_ARATH | Putative RING-H2 finger protein ATL12 |
| KO | Description | Enzyme |
|---|---|---|
| K10664 | E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 | [EC: 2.3.2.27] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G20030 | RING/U-box superfamily protein |
| Medicago sativa L. | MsG0380017652.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g51780.1 | zinc finger, C3HC4 type domain containing protein, expressed |
| Cucumis sativus L. | Csa024239 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000606s00017356.1 | _ |
| Codonopsis lanceolata | Cl_chr01_59160T | _ |
| Arachis hypogaea L. | AH20G27830.1 | Putative RING-H2 finger protein ATL12 like |