Gene detail

Detail information of Am03G003990.1 Annotation

Gene ID	Annotation
Am03G003990.1	homeobox gene 8

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am03G003990.1	mRNA	Chr03	10139551	10146572	-

Sequences

CDS:

>Am03G003990.1
ATGATGGCGGTGAGTTCGAGTTGCAGCAAAGATGGGAGCAAGGTGGCACTCGACAACGGCAAGTACGTCAGGTACACGCCGGAGCAGGTGGAAGCACTTGAGAGGCTCTACCATGATTGTCCCAAACCTAGTTCCCTTCGCCGCCAGCAGCTTATCAGAGAGTGTCCCATTCTCTCCAATATCGAGCCCAAACAGATCAAGGTTTGGTTCCAGAACCGAAGGTGCAGAGAGAAGCAGCGGAAAGAAGCGTCACGGCTACAAGCTGTGAACAGGAAGCTAACAGCAATGAATAAGCTGCTAATGGAGGAAAACGACAGATTGCAGAAACAGGTGTCACACCTTGTGTATGAAAACAGCTTTTTCCGCCAACAGACAACAAACAATCAGGCGACGCTTGCGACGACGGACACGAGTTGTGAGTCGGTAGTAACGAGCGGTCAGCGGCACTTGACACCACAGCAGCATCCACCAAGGGATGCAAGCCCTGCTGGACTTTTGTCGATAGCAGAGGAGACTTTAGCAGAGTTTCTCTCAAAGGCTACTGGAACCGCTGTTGAGTGGGTCCAAATGCCCGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCAATTTCTCACGGTTGCCCTGGAGTCGCTGCACGTGCCTGCGGCCTTGTTGGTCTTGAACCTCCCAGGGTTGCCGAAATCCTCAAAGATAGGCTCTCATGGTATCGTGATTGCCGAACTGTCGATGTTCTCAATGCCATGTCCACCGCAACTGGTGGAACCATTGAATTGCTTTACATCCAGTTGTATGCGCCAACAACTTTAGCACCAGGTCGTGACTTCTGGTTGCTGCGCTACACATCACTTTTGGAGGACGGTAGTCTTGTGGTGTGTGAAAGATCACTTAACAACACTCAGAATGGTCCTAGTATGCCACCAGTGCCGCATTTCGTTAGAGCTGATGTGTTGCCAAGTGGGTATCTGATTAGACCTTGTGAAGGAGGGGGATCTATTATTCATATTGTTGATCATATGGTTTTAGAGCCCTTGAGTGTACCTGAAGTCTTGCGCCCACTTTATGAGTCTTCCATGCTGCTTGCTCAGAGAACAACTATGGCTGCTTTACGTCATTTGAGGCAGATTTCTCAAGAAATTTCTCAGCCAAGTGTCACGGGATGGGGAAGAAGGCCAGCAGCTCTACGTGCGCTTAGTCAAAGATTGAGCAAGGGCTTCAATGAAGCTGTGAATGGCTTTGCAGATGATGGCTGGTCTATGTTGGAGAGTGATGGCATTGATGATATCACCCTTCTTGTAAATTCTTCACCTAGCAAGATGATGGGAGTTAATCTTGGTTATAGCAATGGATTTCCATCCATGACCAGTTCTGTGCTATGTGCCAAAGCATCCATGTTGTTACAGAATGTCCCTCCAGCTATTCTTCTTAGATTCTTGAGGGAACACAGATCAGAATGGGCAGATACCAATATTGATGCTTACTCAGCTGCTGTCATTAAAGCTGGTCCCTGTAGCTTGCCAGGGGCCCGAGCAGGAGGTGGATTTGGTAGTCAGGTTATTCTTCCACTGGCTAACACAATTGAGCATGAAGAGTTCATGGAAGTTATTAAGCTCGAAAACATGGGCTACTATAGGGATGATATGACTATACCTGGTGACATTTTCCTCTTGCAACTTTGTAGTGGAGTGGATGAGCATGCAGTTGGCACTAGTGCAGAGCTAATTTTTGCTCCAATAGATGCATCTTTTTCAGATAGTGCACCCATTCTGCCTTCTGGTTTTCGCATCATACCTCTTGGTTCTGGCACGGATGCTACTAGTCCAAACCGTACACTTGATCTAGCTTCTGCACTTGAGGTTGGAGCCACAGCAAATAAAGCAGGTGGTGACAATTCAGGTTGTTCTGGTAGCACAAAATCTGTGATGACAATAGCATTCCAGTTTGCATTTGAAGTCCACCTTCAAGATAATATAGCAAACATGGCACGACAATATGTCCGCAGCATTATTGCATCTATTCAGAGGGTTTCATTAGCACTTTCTCCTTCAAGTTTTGGTTGTCAGAATGCTTTTCACTTACCACCTGGCACTCCTGAGGCACAAACACTTGCTCGCTGGATCTGTAACAGCTATAGGTTCTATCTAGGAGTAGAGCTACTAAAGAGTGATGGCAGTGAGTCCATGCTTAAATCCCTTTGGCATCACTCAGATGCAGTTTTGTGCTGCTCTTTAAAGGCATTACCCGTTTTTACGTTTGCAAATCAAGCTGGGCTTGACATGCTTGAAACCACATTGGTTGCACTTCAAGACATCACTTTGGAAAAGATCTTTGATGACAATGGGAAGAAAAACTTGTGCTCTGAGTTCCCCCAGATAATGCAGCAGGGTTTCATGTGTCTTCAAGGTGGTATATGTTTGTCCAGCATGGGGAGGCCAGTAACCTATGAGAGAGCAGTAGCATGGAAAGTACTAAACGAAGAAGAATCTGCTCATTGCATTTGTTTTATGTTTATCAATTGGTCTTTTGTCTGA

Protein:

Promoter(3k):

>AM03G003990.1
ACTCGTCAAGCATGACATTCAAAGAATCTAAGATCTTGTTTGCTGAACTTATGACATTTATTAAGGTTCATTAAAGAAGCGAAATTACTGTAAGAGAAAGCACCAAGATATATTCTAGATAACATCATAAGGAACACTTCAAAAATAATCTTCGTACATAGTAGTGTCCGAATTGAATCATGCCATTAATGAATATGAAATTATAAGAATTTCTTAATTAAGATTAAATCAAAAAAGTTAAATACACTTAACAATCTTAATAAAATAAATGTGAAAGTAAGTATGTGTCTTATAAGTGAGTCTGGAGGGATTACACACTGTGCATATTCAAGAGTTATGACATGGTCTAAAGGTGGAAAACTTTGTGATTCAAAAGAAATTAACCTAACTTGGCCGCATGCGAAGAACCCTAATTATGGTGTCTCTGTGATGGGCATACAAGTCTATGAACAGCTTCTCCATCTCTCAAAAAATATGATAGGCGACACAGACATAATCATGGGTTTCAAAAAAATGATTAGCTCTGTTTCTATATGAGAGTATTTCTCAACAGTACCACTCGAGTCTCAGCTAATTAATCAAGCAGGGAAACAATAAATAAAAACAAATACTAACTGCTAGAATTTAAATAGGATTAACTAGCTCTAACATGCATGCATAAGACAACAAAAAAATACTATCCGGTTGTCTGTACAATACACGTGATCTATGACGATAGCGTCATCAGTTTGAGGTATATTCATTCTGACACATGTAAAAAATGCATAGGTTCTGTTGTGCTTGTTGTTTCTTTGATTAAAAAAAATCATGCTGGTTGCAATGGAGCATGGGCAGGAGGGTATAAATACACATAGTTTGACAGTTGTAGTGGGATAATGAGAAATACGATGAAACGGTGTGGGGTAATTGCTTCTTTTCTTTTTATTTGTCAGTTTTCAAAATTTTAAGAAGAAATTGCTCGACGTTACTTGTTAATTTATGAACGAGAGAATCGTTAGTTTACAAGCTTTGAATCATTTCTTGTGTCATTTATAGTATATTTAAGGATTTGGATCGAGAGCGGTCACTAAAATATGCGGTCAGTGTGGTTAGTGCATTAGAAATGATTTTTTTAGTTAAAAAGAAGAAAAAAAAGTTAGACAATTTGGTAATTTTATCTAATAAGTGTTTTGTGCTTAACTGCATTGACCGTTTCACAATTTACTATACTCGTTCCTAAATCCCATGTTTAGACATGCGTTTTGACACACAAGTAAATAAGAAAAGAAAGAAAATGAAAGAATTAAATAATACTCTATCCTCCCAAAATATAAGGTCTCATTCCACTTTTTACAGTTATTAAAAAAAGTTATTGGTGTAATTAATATGTTAAAATTTAGTATTACTATTACTAAATTATCATAACATTTAATGTTAACTTTTCATATACCAACACAATTTAGTACTATTAATAAGAATATATTTGAAAAAAGAGTAATAAACGTATATAGAAACAAAAATGAAAAATACTTATATTTTGCGACGGAGGGAGTATATAACCAAGTGATGTGTACTTTTTATGCATATGTGGTAAATATGTGCTAAAAGTGTTGTAACCGTACAATTTTTGTTGTTGACAAAATACAAGTATTTTCTTGAATCCTATAACTCCTACTTTTAGTTTTAGTGTCTCTTAGCAAATGTTCTGAAAACTGAAATGGTGAAATTTTTGGGTCATTGTTCAATAGCTTTAAATCATTTGACCTTGGATGAAATTTGGTCTAAATGCTCAAATAAATGAATCAAAGACAATGTTGGTCATGGTTTAAATAATTGAACTGTTTGGTTTTTTAAACACTGCTGTTAGCTCACCACTGAATACCTATTTGTGACTACATTATTTATTTTCTAATAATATTAAGTATGAATGTAAGCTCAATTGGTAGTGGGAATGCATTGAGCTTGTACCTAAGCCTCAGGGTACAAGGTTCGATTCCCACGGAATGCAAAATCTCTACATGGGGGGTAGAGAAGGTCATGAGTGCATCGCTGGGTAGCCTACTAAGTAAGAAAATGGCCCAGGATGTACTTGGGAGTTGGAAGAAGACATGCGTACCCAATACCCATATCTCTTCCACTTAGGTACGTTTTGATTAATTTATCAACTATTTACGGTCCAAAATGTGGAGCAGAGCACTAGTAATATTTTGAGTAATTAATGTTATTTAGTCAAAGTTTTAATGCCAAAAATAGTCAAAAAAAACCACGTTACAATACCAATTAACCAAGTTTTTTAAGTTATTAACTAACCTACTTTTTCACAGTTTTTAGTTGATGGCATAGAAAACTGTGAAAAAATAGGTTGATTAATGATTAAAAAACTTAGTTAATTGGTGTTGTTATGCGGTTTTTGGCTATTTTTGGCTCAAAAACTTTAGGTGAATAACGTTACTCTAATATTTTAGAGCGCACGCGTTGTGAATGAGAGTATGGTTGGCATGCACTTTTGGCTATTTGTTTCTGACAAGTCACAACCTCTGTCTGTCTGTGTGAGTGTGTTGGAAAGTTGTAAAATGAAGTAGTGCAAGAAAAGCAAGAGGCAAAAGAGCTAAAGAAGGACGTGAAAAGAAAGGGAGAGTGTTTGGCATATATTATGTCTGATATTTGGGGTTTTAATTTTTCCGTCATAAGCAACTGATCGAACCGCATATAGTATTATACAGACACGCAAATATAGAAAAACTCAAACTCCATTTTCTCTCCATACTACTAGTATTTCACCATCACATCTCTTCTTCGTATAATCATCCATCCATATAATACAACCAACAACAACAACTGTGTCCGTCACAGACAAACTCTGAAGCAGTACGTACTACGATTACGACACCTCTTTTAACTTTCACATCATTCTATTCTTTTCTCTTCTCTTTCATGTCCGAGCGATTCATATCTCATGCTTCTTCTTTGGCTTTAAACTGAAAGCACTTAACCAAAGTCATAATAGGATTTGGAAGGGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF08670.14	MEKHLA	703	843	2.60E-52
PF01852.22	START	168	376	7.30E-49
PF00046.32	Homeodomain	21	79	9.10E-17

Gene family

Gene family	Subfamily
Transcription Factors Family	HB-WOX
Transcription Factors Family	Others

Gene Ontology

GO term	Description	Category
GO:0030154	cell differentiation	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0003677	DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR023393	START-like domain superfamily
IPR002913	START domain
IPR013978	MEKHLA
IPR009057	Homeobox-like domain superfamily
IPR001356	Homeobox domain
IPR044830	Class III homeodomain-leucine zipper family

trEMBL

trEMBL term	Description
A0A8B8LK58	_

SwissProt

SwissProt term	Description
ATHB8_ARATH	Homeobox-leucine zipper protein ATHB-8

KEGG

KO	Description	Enzyme
K09338	homeobox-leucine zipper protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G32880	homeobox gene 8
Medicago sativa L.	MsG0380017666.01.T01	_
Oryza sativa L.	LOC_Os03g43930.2	START domain containing protein, expressed
Cucumis sativus L.	Csa009954	_
Glycyrrhiza uralensis Fisch.	Glyur000466s00022895.1	_
Codonopsis lanceolata	Cl_chr01_59840T	_
Arachis hypogaea L.	AH20G27410.1	Homeobox-leucine zipper protein ATHB-8 like

Expression pattern