| Gene ID | Annotation |
|---|---|
| Am03G002710.1 | Transcription initiation factor IIF, beta subunit |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am03G002710.1 | mRNA | Chr03 | 6925148 | 6931067 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF02270.18 | TFIIF_beta | 188 | 251 | 7.40E-21 |
| PF17683.4 | TFIIF_beta_N | 20 | 136 | 2.20E-07 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | Molecular Function |
| GO:0003743 | translation initiation factor activity | Molecular Function |
| GO:0004386 | helicase activity | Molecular Function |
| GO:0016787 | hydrolase activity | Molecular Function |
| GO:0006413 | translational initiation | Biological Process |
| InterPro term | Description |
|---|---|
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR003196 | Transcription initiation factor IIF, beta subunit |
| IPR011039 | Transcription Factor IIF, Rap30/Rap74, interaction |
| IPR040504 | TFIIF, beta subunit, N-terminal |
| IPR040450 | TFIIF beta subunit, HTH domain |
| trEMBL term | Description |
|---|---|
| A0AAN9MF87 | _ |
| SwissProt term | Description |
|---|---|
| T2FB_SCHPO | Transcription initiation factor IIF subunit beta |
| KO | Description | Enzyme |
|---|---|---|
| K03139 | transcription initiation factor TFIIF subunit beta | [EC: 5.6.2.-] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G75510 | Transcription initiation factor IIF, beta subunit |
| Medicago sativa L. | MsG0680031819.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g43450.1 | transcription initiation factor IIF beta subunit, putative, expressed |
| Cucumis sativus L. | Csa003624 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000028s00003554.1 | _ |
| Codonopsis lanceolata | Cl_chr05_35120T | _ |
| Arachis hypogaea L. | AH17G24490.1 | Transcription initiation factor IIF subunit beta like |