Detail information of Am03G002420.1 Annotation
Gene IDAnnotation
Am03G002420.1 Putative lysine decarboxylase family protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am03G002420.1mRNAChr0360855436087666-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF03641.17Lysine_decarbox611907.40E-45
PF18306.4LDcluster4291304.10E-12
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0009691cytokinin biosynthetic processBiological Process
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compoundsMolecular Function
GO:0005829cytosolCellular Component
GO:0005634nucleusCellular Component
GO:0016829lyase activityMolecular Function

InterPro
InterPro termDescription
IPR031100LOG family
IPR005269Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG

trEMBL
trEMBL termDescription
A0AAN9MGT5 _

SwissProt
SwissProt termDescription
LOGL6_ORYSJProbable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6

KEGG
KODescriptionEnzyme
K22522cytokinin riboside 5'-monophosphate phosphoribohydrolase[EC: 3.2.2.-]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT2G28305 Putative lysine decarboxylase family protein
Medicago sativa L.MsG0380017840.01.T01 _
Oryza sativa L.LOC_Os04g43840.1possible lysine decarboxylase domain containing protein, expressed
Cucumis sativus L.Csa003635 _
Glycyrrhiza uralensis Fisch.Glyur000081s00006802.1 _
Codonopsis lanceolataCl_chr01_27660T _
Arachis hypogaea L.AH17G24010.1Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 like

Expression pattern