| Gene ID | Annotation |
|---|---|
| Am03G001930.1 | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am03G001930.1 | mRNA | Chr03 | 4973973 | 4976351 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01388.24 | ARID | 34 | 116 | 5.60E-19 |
| PF00505.22 | HMG_box | 247 | 314 | 1.30E-11 |
| PF09011.13 | HMG_box_2 | 244 | 313 | 4.40E-10 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | ARID |
| Epigenetic Regulators | HMGB9 |
| Transcription Factors Family | HMG |
| GO term | Description | Category |
|---|---|---|
| GO:0005634 | nucleus | Cellular Component |
| GO:0003677 | DNA binding | Molecular Function |
| GO:0010197 | polar nucleus fusion | Biological Process |
| InterPro term | Description |
|---|---|
| IPR045303 | HMGB9-like, ARID/BRIGHT DNA binding domain |
| IPR036910 | High mobility group box domain superfamily |
| IPR009071 | High mobility group box domain |
| IPR036431 | ARID DNA-binding domain superfamily |
| IPR001606 | ARID DNA-binding domain |
| trEMBL term | Description |
|---|---|
| A0A1S2Y812 | _ |
| SwissProt term | Description |
|---|---|
| HMGB9_ARATH | High mobility group B protein 9 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G76110 | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain |
| Medicago sativa L. | MsG0380017904.01.T01 | _ |
| Oryza sativa L. | LOC_Os09g37250.1 | high mobility group, putative, expressed |
| Cucumis sativus L. | Csa014829 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000661s00022609.1 | _ |
| Codonopsis lanceolata | Cl_chr01_28980T | _ |
| Arachis hypogaea L. | AH17G23170.3 | High mobility group B protein 9 like |