Detail information of Am03G000380.1 Annotation
Gene IDAnnotation
Am03G000380.1 Glycosyl hydrolase family 10 protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am03G000380.1mRNAChr0311205701123291+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00331.23Glyco_hydro_102014601.90E-44
Gene family
Gene familySubfamily
Carbohydrate-Active enzymes FamilyCBM22
Carbohydrate-Active enzymes FamilyCBMnc

Gene Ontology
GO termDescriptionCategory
GO:0000272polysaccharide catabolic processBiological Process
GO:0005576extracellular regionCellular Component
GO:0016020membraneCellular Component
GO:0045491xylan metabolic processBiological Process
GO:0016998cell wall macromolecule catabolic processBiological Process

InterPro
InterPro termDescription
IPR017853Glycoside hydrolase superfamily
IPR001000Glycoside hydrolase family 10 domain
IPR044846Glycoside hydrolase family 10
IPR008979Galactose-binding-like domain superfamily

trEMBL
trEMBL termDescription
A0A1S2Y7U2 _

SwissProt
SwissProt termDescription
XYN5_ARATHEndo-1,4-beta-xylanase 5

KEGG
KODescriptionEnzyme
K01181endo-1,4-beta-xylanase[EC: 3.2.1.8]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT4G38650 Glycosyl hydrolase family 10 protein
Medicago sativa L.MsG0480021430.01.T01 _
Oryza sativa L.LOC_Os03g14010.2glycosyl hydrolase family 10 protein, putative, expressed
Cucumis sativus L.Csa016775 _
Glycyrrhiza uralensis Fisch.Glyur000089s00008767.1 _
Codonopsis lanceolataCl_C00535_unscaffolded_00100T _
Arachis hypogaea L.AH13G08660.1Endo-1,4-beta-xylanase A like

Expression pattern