| Gene ID | Annotation |
|---|---|
| Am02G040310.1 | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G040310.1 | mRNA | Chr02 | 201314583 | 201319240 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01388.24 | ARID | 28 | 111 | 1.40E-19 |
| PF00505.22 | HMG_box | 254 | 321 | 9.80E-15 |
| PF09011.13 | HMG_box_2 | 252 | 320 | 2.00E-10 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | ARID |
| Epigenetic Regulators | HMGB15 |
| Transcription Factors Family | HMG |
| GO term | Description | Category |
|---|---|---|
| GO:0009860 | pollen tube growth | Biological Process |
| GO:0019760 | glucosinolate metabolic process | Biological Process |
| GO:0090406 | pollen tube | Cellular Component |
| GO:0001067 | transcription regulatory region nucleic acid binding | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR045303 | HMGB9-like, ARID/BRIGHT DNA binding domain |
| IPR036910 | High mobility group box domain superfamily |
| IPR009071 | High mobility group box domain |
| IPR036431 | ARID DNA-binding domain superfamily |
| IPR001606 | ARID DNA-binding domain |
| trEMBL term | Description |
|---|---|
| K7LM49 | _ |
| SwissProt term | Description |
|---|---|
| HMG15_ARATH | High mobility group B protein 15 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G04880 | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain |
| Medicago sativa L. | MsG0780035955.01.T01 | _ |
| Oryza sativa L. | LOC_Os02g27060.1 | high mobility group, putative, expressed |
| Cucumis sativus L. | Csa006334 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur001207s00025872.1 | _ |
| Codonopsis lanceolata | Cl_chr08_34740T | _ |
| Arachis hypogaea L. | AH19G36120.3 | High mobility group B protein 15 like |