| Gene ID | Annotation |
|---|---|
| Am02G039540.1 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G039540.1 | mRNA | Chr02 | 199008326 | 199021234 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00176.26 | SNF2-rel_dom | 343 | 731 | 1.00E-68 |
| PF00271.34 | Helicase_C | 920 | 1017 | 1.60E-15 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Others |
| Epigenetic Regulators | CHR28 |
| Transcription Factors Family | SNF2 |
| GO term | Description | Category |
|---|---|---|
| GO:0006281 | DNA repair | Biological Process |
| GO:0005524 | ATP binding | Molecular Function |
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0016787 | hydrolase activity | Molecular Function |
| GO:0016301 | kinase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR017907 | Zinc finger, RING-type, conserved site |
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR018957 | Zinc finger, C3HC4 RING-type |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR000330 | SNF2, N-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| trEMBL term | Description |
|---|---|
| A0A1S2Y237 | _ |
| SwissProt term | Description |
|---|---|
| CHR28_ARATH | Helicase-like transcription factor CHR28 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G50410 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related |
| Medicago sativa L. | MsG0180006128.01.T01 | _ |
| Oryza sativa L. | LOC_Os08g08220.3 | EDA16, putative, expressed |
| Cucumis sativus L. | Csa000614 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000103s00007448.1 | _ |
| Codonopsis lanceolata | Cl_chr03_17770T | _ |
| Arachis hypogaea L. | AH09G31090.1 | uncharacterized ATP-dependent helicase C23E6.02 like |