| Gene ID | Annotation |
|---|---|
| Am02G039260.1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G039260.1 | mRNA | Chr02 | 198552306 | 198556612 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 173 | 220 | 2.00E-63 |
| PF13041.9 | PPR_2 | 246 | 290 | 2.00E-63 |
| PF13041.9 | PPR_2 | 313 | 360 | 2.00E-63 |
| PF13041.9 | PPR_2 | 352 | 395 | 2.00E-63 |
| PF13041.9 | PPR_2 | 383 | 432 | 2.00E-63 |
| PF13041.9 | PPR_2 | 418 | 454 | 2.00E-63 |
| PF01535.23 | PPR | 316 | 346 | 1.10E-54 |
| PF01535.23 | PPR | 421 | 451 | 1.10E-54 |
| PF13812.9 | PPR_3 | 174 | 221 | 1.50E-50 |
| PF13812.9 | PPR_3 | 302 | 360 | 1.50E-50 |
| PF13812.9 | PPR_3 | 372 | 430 | 1.50E-50 |
| PF12854.10 | PPR_1 | 311 | 341 | 8.60E-45 |
| PF12854.10 | PPR_1 | 414 | 446 | 8.60E-45 |
| PF17177.7 | PPR_long | 247 | 364 | 1.70E-24 |
| PF17177.7 | PPR_long | 366 | 503 | 1.70E-24 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0005739 | mitochondrion | Cellular Component |
| GO:0010019 | chloroplast-nucleus signaling pathway | Biological Process |
| GO:0031930 | mitochondria-nucleus signaling pathway | Biological Process |
| GO:0140053 | mitochondrial gene expression | Biological Process |
| GO:0006950 | response to stress | Biological Process |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| G7IE86 | _ |
| SwissProt term | Description |
|---|---|
| PP287_ARATH | Pentatricopeptide repeat-containing protein At3g59040 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G59040 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Medicago sativa L. | MsG0080048849.01.T01 | _ |
| Oryza sativa L. | LOC_Os08g09270.1 | pentatricopeptide, putative, expressed |
| Cucumis sativus L. | Csa020056 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000113s00009419.1 | _ |
| Codonopsis lanceolata | Cl_chr01_60390T | _ |
| Arachis hypogaea L. | AH19G37420.1 | Pentatricopeptide repeat-containing protein At3g59040 like |