Gene detail

Detail information of Am02G039180.1 Annotation

Gene ID	Annotation
Am02G039180.1	Transcription factor jumonji (jmjC) domain-containing protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G039180.1	mRNA	Chr02	198466892	198487040	+

Sequences

CDS:

>Am02G039180.1
ATGGATGTTAGCGTCGAAACGGTGTCATTGAAGCACGATGAATGCTCAGTTAAAGGTGATGATGTGGCACAAGCTATGGATAAATGCGCTGAAACGGTGCCGTTGAAGGATGCTGAAGCTTTGATGGGAGTTGATGACGTGGCAACAGCAGCAGGAGGAGGAGGAGGAGACTCTTCTGTTCAAGCTGTTGGGAAAAAGAAACGCGGCAGAAAGAGTAAAGCGGAGAAGGAGGAAGCATTGAAGAAAATGTTAGCTGAAAGAGCAAATGAATCAGATGTGGCGGCAGGAGTTTCTTCTACTGTTGTTCTTAGAAAGAGTACACGCAGCAAAAAGAGTAAGAACATGTCAGTGGTGGTGGTGGAGGAGAACGAGGAGAAGGGCAAACGTGGAAGAAAAAGAAAGATTATCTCTACTTCTGAAGCTCCACAAGAAGGGGAAAGTGGTGGAGTTATCAAGAAGAAGGGAAGACCTGGTAGAAAAAAGAAGACCGCTGAGAAAGAACTGGTCTGTGGAAAGCCAGAGAGTGATGTTTTTGGGGCGCAGGATCAGAACCATCGTGAATCTGAAATGCCTATTGTAGAAAATAAAGATTATCGCTTAAGGAATCATAGGGACGGGAAACCTATAGTCAATAAGCACGATGCTAAGTGGATTGAAGATGAGTGTCTACTGTGCCATCAATGTCACAGAAGTGACAAGGGCAAGGTTGTAAGGTGCACAACATGTAAACGGAAAAGATTTTGCCTACCCTGTATACAAAATTGGTATCCTCAATGGAAAGAGGATGATATTGCCGAGGCATGTCCTGTGTGTCGTGGTAATTGCAATTGCAAAGAATGCTTGAGATCTCGTGACCTTATCAATAAATTGAAAGATAAGACTACAACTGATGAAGCTATGGAGGTTGAGCTCTCTAAGTATCTGTTGAAAGGACTTCTTCCATATTTAAGACAGATAGATGAAGAACAAATGATTGAGAAGAATATAGAAGCCAAGAGACAAGGGCTCTCACTCTCAGAGCTGCAAATAAAAGTGGCGGATTACACTAAAGATGAGCGTGTGTACTGTGACAACTGCAAAACATCAATATTTGACTACCACAGAAGCTGTACAAAATGTTCTTTTGACCTCTGTCTTCTCTGTTGCTGTGAGCTTCGTGGTGGACAACTTCTAGGTGGGGAAGATCCAGTTGACTTGAAGTTTATCTGCCGAGGCCGTGATTATCTACATGGTAGAGATGAAAATATACTGGTTAAAGAAAATGCATCACATATTGATGCCGAGCCTATGACTCGCGAATGGTCAAGATCTGGGTGGCATGCCAATGGTGATGGTAGCATTCCCTGTCCAAAAGCAAATAGTGAATGCGACCATGGTTTTCTTGAGCTGAAAAGCATTCATCCTCCAAATCACATCTCCGAGATAGTATGTAAAGCACAAGAACTAGCAGAAGCATACAAGCTTCAAGATGCAGAGGAGTCTCTTAATAATTTCTGTTCATGTTTGAAGCTTGCTAGGAACGCAAATGATATATACAATAACACAAGGAAGGCAGCTTCTCGTGAAGACTCCAGTGACAACAGTTTATACTGCCCTAGGGCTGTAGATCTAAATCACAAGGATTTAAGTCATTTTCAATGGCATTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTGCTTGAATGTACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTCCGTCAGAAAAGTAGTGCCAAGCATGGTGTACATATGGGTGTGAATGCAATTGATTGCTTAACTTGGTGTCAGGGGGATATCAATATCCACCAATTCTTTACTGGGTACACAGCTAGTCGCAAGGATTGGCTTAGCTGGCCTCAGTTATTAAAATTGAAAGATTGGCCTCCTTCCAATTTATTTGAGGAACGTTTACCTCGTCATTGTGCCGAGTTCATCTCTTCCTTGCCGTATAAAGAATACACAGATCCTTTCAGAGGTGCTCTGAACCTTGCTGTGAAGTTACCTGATGGTTGTCTTAAGCCAGACATGGGGCCAAAAACATATATCGCTTATGGATTTACTCAAGAGCTCGGACGCGGTGATTCCGTGACTAAGCTCCATTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATACCGCTGAAGTGAAATTAGATCCTGAGCACATTGCTGCCATTGAGAATTTGACGCCAGAGCACCTTGAGCAAGACAAGAGGGAGCTACTTGGTGATAGTCAGGATGAAAGGATTAATGTTGGGATTCTTGATAATTTGTCTTCCACCATCATTCCTCCAGACAGGCTAAATAGTGTTCGGGTCATGGAAAATGAAATTGGATTACGTGATGTGAAGATAGTTGATCCATCTCATGAACACTCTGGCACTAATGATGATGTTCTGTCTCGTGGGTCAGAGCTCACCGAGGTTGACAAAGTGACAATGAAACAAGAAAAGAGTTTGTTGGTTGGGGATGATTCTTTAGAAGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCTAAATTGGAGGAATATCTGAAGAAACATTTCAGAGAGTTCAGGCATATCCACTGCTGTCCTATAAAGCAGGTTATTCACCCTATATTTGATCAAACCTTTTATCTGACTATGGAGCATAAGAAGAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGACTTTTGTTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCTCATCAAGTCAGAAATCTGAAGTCCTGCATCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGTGAGTGCTTCCGTTTGACAGAGGAATTTCGCAAACTTCCAATAAATCACTTGTCCACCGAGGACAAATTGGAGGTGAAGAAAATGACTATATATGCTATGCTTGATGTGGTCAAAAAATTGGAGAAAGCAAGATCTGTGGGAAACCAAGATTCCAATGTAAATGTAACTGTGAGAGATTGA

Protein:

>Am02G039180.1
MDVSVETVSLKHDECSVKGDDVAQAMDKCAETVPLKDAEALMGVDDVATAAGGGGGDSSVQAVGKKKRGRKSKAEKEEALKKMLAERANESDVAAGVSSTVVLRKSTRSKKSKNMSVVVVEENEEKGKRGRKRKIISTSEAPQEGESGGVIKKKGRPGRKKKTAEKELVCGKPESDVFGAQDQNHRESEMPIVENKDYRLRNHRDGKPIVNKHDAKWIEDECLLCHQCHRSDKGKVVRCTTCKRKRFCLPCIQNWYPQWKEDDIAEACPVCRGNCNCKECLRSRDLINKLKDKTTTDEAMEVELSKYLLKGLLPYLRQIDEEQMIEKNIEAKRQGLSLSELQIKVADYTKDERVYCDNCKTSIFDYHRSCTKCSFDLCLLCCCELRGGQLLGGEDPVDLKFICRGRDYLHGRDENILVKENASHIDAEPMTREWSRSGWHANGDGSIPCPKANSECDHGFLELKSIHPPNHISEIVCKAQELAEAYKLQDAEESLNNFCSCLKLARNANDIYNNTRKAASREDSSDNSLYCPRAVDLNHKDLSHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRQKSSAKHGVHMGVNAIDCLTWCQGDINIHQFFTGYTASRKDWLSWPQLLKLKDWPPSNLFEERLPRHCAEFISSLPYKEYTDPFRGALNLAVKLPDGCLKPDMGPKTYIAYGFTQELGRGDSVTKLHCDMSDAVNVLTHTAEVKLDPEHIAAIENLTPEHLEQDKRELLGDSQDERINVGILDNLSSTIIPPDRLNSVRVMENEIGLRDVKIVDPSHEHSGTNDDVLSRGSELTEVDKVTMKQEKSLLVGDDSLEGALWDIFRREDVPKLEEYLKKHFREFRHIHCCPIKQVIHPIFDQTFYLTMEHKKKLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRKLPINHLSTEDKLEVKKMTIYAMLDVVKKLEKARSVGNQDSNVNVTVRD*

Promoter(3k):

>AM02G039180.1
ATTTTTCATAATTTCCAAAAAATCTAAAAAAATTTGCAAAAACTTATTTTGGATTTATTAGTTTTTTAGTGGTGTTTTGATAATTTTTGGATTAGTTTTGGCTCTTTAACGGATTTTTAGTAGCATTTTTATAGCCTTTTTTAAAAATTTAAATAAAAAACAATTATTTTTAATAACAAAATCGGATTTACCTTAGGTGGGGTAAATTCGAATTCCTTTTTTTTAGGGAAATCGGATTTATCTACCCACTAGGTAAATCCGATTTGAAAAATAACAAAGCGGATGTATCCTCATCTGAGGTAAATCCGCTTTGTTATTTTTATAGTCGGATTTACCTATTAGGTACCCCCATTTTAGGTAAGTTCGCTTTGTTATTTGGGAAAGGGTATTTTTGGGTATATGGGATGTGATGGGGGTATATGGGATGTGATGGGGTACAAAAAAAACCCTAATCAGATCAATCCACTAATTCGGTCGATTAAACACTTCAACCCAAGAACAAATGTTACAACCCTGACTTTGGTTTGCCAAGGAAACATGTATGTGGACTTTCACAACTTTGTTAAGCTAGGAGCAAAAATGGAGCGCTCCTAGTAATGTATGCAAGATATACATGATTTAGTTAGGAGTGCGTTTGATTTGTTAAAAAGTAAGTGATTGAATCAGACAACTCTAATTATATCTTGTTTAATTTGAAAACTATTCATGGAGCTACCAGACAAAAGTGGGGGCAATGGATTGACTCAAATTCTCGTCCCTCATAAAATAAAATCATAGTACAACTTCTGTCCCACACACAAAAAATGGCTAAATAGCACTTTTGGTCATTTATCTTTGCTCTAGGTTTCATTTTAGTCATTTATCATTTTTTTGGTCCATTTTGGTCCCTCATCATTCATTTAGGTTTCATTTTGGTCCCTGCCGTTAGTTTTTGTTAACAGACGCCATGCTTGTAGTTAACTACTGACGTGGCGTCTTAAGTGTCACTGCTGACTTGGAATTCTTTAAATGATGTGGCATATAAGTGACCAAAATGAAACCTAAGAAAAACATGAGGGACCAATTTGACAAAATTAACAAATCTGGAAAAACACCCAAATCTTCATCTTCATCTTCTTCGGCGAGCCACCACCACCGCCACAAACAGTGACATCGCCTCTCTCTCTCCCCCCCTCTCTCTCCCTTCGTCATTAAAAGTGCCAAAAAACCGTAAAACGCGAATCTACATTTCCATTTCGTTCTCAATTCTTTATCATTTTAGTTGAAATATTTTGCTAACAATCAGTTACTGAACCAATTTCGAGTCTATTGCAAGTGGTTTGGTGAATTTTGGTTGAGTTTTGAACGTTTCCCAAATTTGCAAAACCCAAAACGCGTTTACCTCTGAAAATCACGTTTTCGATTAAGTTATTCCACTTTTTTGTGCCAATTGGTGATGGATTCTAATTCCTTGTGAAATTTCGCATGAAATGCACTATTCATTTGCTTGATTTGGTAAAGAATTGAGAATTCTAGAAATTATTGTTGTTCTTGGTGTCCTTGATGAGAGCGGGAGACAGAGGGAGGGAGAGAAAGAGAGAGAGGGAGGGAGAGAGAGGCGATGTCACTGTTTGTGGTGGTGGTGGTGGCTCGTCGGAGAAGAAGAATGTGAAGAATGGGGTGTTTTTCCCGATTTGTTAATTTTGTCAAGTTGGCCCCTCATATTTTTTTTAAGTTTCACTTTGGTCCCTTATATGCCACATCATTTAAAGAATTCTAAGTCAGCAGTGACACTTAAGACGCCACGTTAGCAGTTAACTGGCAGTGTGGTGTCTGTTAACAAAAACTAACGTCTGGGACCAAAATGAAACCTAAATGAAAGATAAGGGACCAAAACGGACCAAAGAAAATATAGAGGACCAAAATGAAACCTATAGCAAAGATAAATGACCAAAAGTGCTATTTAGCCCACAAAAAATATACCAAATATTATTTTTATTTTCTACTCAATAATCTCTCTCTCCTATCTCATTCTTCCCTATTCTTTCTCTCCCTCTCTCTACCTCTCATCTCTTTTCTATTTTCTCATCTTATGACCTCTCTTCTTCATCTCTCTCTTTCTTTCTCCCGCCGTCTGTCTCTCTTCTTTCATCTCTCTTATATCTTCTCATTTCATGACTTCTCTCCATTATCTCTCTCTTCTATCTTCTACATTGCACTTTTTTTTTTATATTTTTCAATAATATTATAATATTTTTTTGACAAAAATAATACCATAACATGTTATATTAAATCATTATAAACATTAGAAAGAAAATTATAGTAAATTTTACATTTTTTTTGTATGGCCTATTATTTAGCAAATAGTGTATTAGACTAAAAGTTTCTACCAAGAAAGGTTGGTTCGAGCGGTAACTAGACTCGGATCCCATCTCAATGTCTCAGATTTAAATATTGAGTGTGGCAAAAAAAACTAGCTGCCATGGTAAAAAAAAGACTATAAAAGTTTTTTTTGGTAAACAATGTATCATTCACAGTAGAGATTAATCCTCTGAGGAATCGGTTAACGTGCGGAGAAATATTTTTCCATAACCACGGATCGAACACATCTGGTACCGCCGTGTCTCGTATTTACTATCGAGTCAACAACTACTTACCTCTTTTTAAATCAAAACCGACCCTCCAAGAGCAGCACCGAGTTTTTCAGTTACACAGCATACTATTCATTCCATTTTTGGAGAATAACATCAAGGGTGCCCTCTAACACAATCTTGGCGATAGACGTGAAACCCCTTTCCCGTAATTGTTTATTGTTAGTTTTCTCCAAAACACTATAATTTAGGTACGTGTCGCGTCGCGTGCTGTCGAACTCGAATGTACATGTGATGAAACCGAAATGCAGCTAGCTAGGGTTCACCATTTCAATTTTGCCCTAAATACCAGTAATAATTGGCAGGGGAAGCGAACAACACACTCACACTCACAGGGGAGTCCGTTCTTCCTAATCGTAAAACACAAGCT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02373.25	JmjC	830	932	3.10E-16

Gene family

Gene family	Subfamily
Transcription Factors Family	Jumonji

Gene Ontology

GO term	Description	Category
GO:0003712	transcription coregulator activity	Molecular Function
GO:0008168	methyltransferase activity	Molecular Function
GO:0032259	methylation	Biological Process
GO:0016020	membrane	Cellular Component
GO:0016491	oxidoreductase activity	Molecular Function

InterPro

InterPro term	Description
IPR018866	Zinc-finger domain of monoamine-oxidase A repressor R1
IPR001841	Zinc finger, RING-type
IPR003347	JmjC domain
IPR045109	Histone demethylase JHDM2-like

trEMBL

trEMBL term	Description
A0A1S2Y080	_

SwissProt

SwissProt term	Description
JMJ25_ARATH	Lysine-specific demethylase JMJ25

KEGG

KO	Description	Enzyme
K15601	[histone H3]-dimethyl-L-lysine9 demethylase	[EC: 1.14.11.65]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G07610	Transcription factor jumonji (jmjC) domain-containing protein
Medicago sativa L.	MsG0180003786.01.T01	_
Oryza sativa L.	LOC_Os03g31594.1	jmjC domain containing protein, expressed
Cucumis sativus L.	Csa020849	_
Glycyrrhiza uralensis Fisch.	Glyur000113s00009431.1	_
Codonopsis lanceolata	Cl_chr05_08640T	_
Arachis hypogaea L.	AH09G30720.1	Lysine-specific demethylase JMJ25 like

Expression pattern