Gene detail

Detail information of Am02G038730.1 Annotation

Gene ID	Annotation
Am02G038730.1	GHMP kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G038730.1	mRNA	Chr02	197419702	197430487	-

Sequences

CDS:

>Am02G038730.1
ATGGCGGAGGATTCGCAGAATTGGGTGCTGATGGTGACTGCCCAGACGCCAACCAACATTGCTGTAATTAAGTATTGGGGGAAGAGAGATGAAACCCTAATCTTACCTGTTAATGATAGTATCAGCGTTACTCTTGATCCTAATCACCTTTGTACCACCACCACCGTCGCTGTCAGTCCTGCTTTCAACCAAGATCGCATGTGGCTCAATGGCAAGGAGATTTCTCTTTCTGGGGGCAGGTTCCAAAGCTGTTTAAGGGAGATCCGCGCTCGTGCTTGTGATGTTGAGGATACGAAAAAGGGTGTTCAGATCACGAAAGAGGATTGGAGCAAATTGCACGTACACATTGCTTCCTACAATAACTTCCCTACTGCAGCTGGACTGGCTTCGTCAGCTGCGGGTTTCGCCTGTCTTGTTTATGCCCTTGGGAAGCTAATGAATGTCAAAGAAGATAATAGCCAGCTATCTGCTATTGCAAGGCAAGGATCAGGTAGTGCTTGTCGCAGCTTATTTGGGGGATTTGTGAAGTGGATAATGGGAAAAGAGGAGAATGGAAGTGATAGTCTTGCAGTTCAACTTGCTGATGAAAAGCATTGGGATGATCTTGTTATTGTTATTGCTGTGGTTAGTTCACGACAAAAGGAAACTAGCAGCACCTCGGGGATGCGAGAGACTGTTGAAACAAGCTTGCTTTTACAGCATAGAGCAAAGGAAGTAGTGCCAAAGCGGATACTGCAAATGGAAGAAGCCATTAGAAACCGCGATTTTGCATCTTTTTCACAACTCACCTGTACCGATAGCAACCAGTTTCATGCAGTCTGTCTGGATACGTCTCCCCCTATATTTTACATGAACGATACATCTCATAGGATAATCAGCATCGTTGAAAAATGGAACCGGTCAGAAGAAGCTCCTCAGGTAGCTTATACGTTCGATGCAGGGCCAAATGCAGTTCTAATTGCACGTAACAGGAAAGCTGCTACCATTTTGATTCAGAAGCTACTTTACTACTTCCCTCCAAATTCAGATGACCTCGACAGTTACATTATTGGTGACAAGTCAATTGCAAAAGATGCTGGGATCAACGGAATACAGGACATAGAAGCTCTGCCACCTCCTTCAGAAATTAAAGATAAGATTCCCTCACAAAAATACAAAGGGGATGTCAGTTACTTCATATGTACCAGACCAGGAAGGGGACCTGCTGTGCTTTCTGATGAAAGTCAAGCTCTTCTCAACAGTGAAAATGGGCTTCCCAAGTAA

Protein:

Promoter(3k):

>AM02G038730.1
ACAAATTTATTGTACATTACATTGAACTTGATTTTTCGTAATTTGGGAGGTTTCACCTTATTTATTTGTGTCTCAATTTTCCTCTTTAGAGAGAAACTACCTGTGCGTATGCTAGCATACGCACGGGTAACATTCTATTCTTTGTATAAATAGATTTAAACAGAATCCAATTACAATAAATTTTTTAGTTATTAAGAAATGAAGTTTTACAATTTTAAAATATTTTTTTCCTTTGACATTTTTTATCGTCACCAAATACATTTTATAAGTAGTACAATTGTATTAACAACATGTAATATTTTCCCGCTGCATCTCAAATTTAGAATATAAAATAATTATTTTAACAATGTGTAACGGTTCGACCATAAAAAATTAATAGTAATAAAATTATAGCAACAACGTGGAATGTTAACCCATTGAAACTAAAAAATAAAAAATAATTTTTTCCGACAATATCTAGTACTTTTACGACTCAAGAAAAATGTCCATTTATAAAAAATAAAGATATTCATGAAAACAAATATAAAAATGATTATATCGATAACGTGTTACATTTCCCCGTAAGAAATCAAAAATAATGAAATTGTATCAACAATATGTAATGTTTACCCATTAAAACTAAAAATAAAATAAAATAATCTTTATAAATAGATAGCTTATAGTTGATAAATAGATAATTGAGGATTAGTGTTTTGATTAAATAGATAGTAAATAGATTAAAAAAATGAAATGTGAAGAGAGAAGGAGGGAGAGAGACAGAGAGAGATAATAAAGGTGGGAGAGATAGAGTGAAAATTGAGGAAAAATAAGAGTGAGAGAGAGGTAAATAATTGTGTTTTAAATGTGAGATAAAAAAATTTAAGAGGTGAGAGAGAATGTGGGACCCACAAAAATAAAATGAGATAGAATAATTATGGTTTTCCAAATTTGCCCTCAAAAAAACAAAAATTAAGTGGGCAATATGGTAATTTGATTAGTTTTTTGTTTTCTTAAATAGATATTTTAGATTAGATATGGATAGTATGGTATTTTTTATAGTGGTTGAGTCGATTAAATAGATACTTGATAATTGAAAAATAGGTAGTTGATGATTAAATTTTGATTAAATAGATAGATCAAAAAAATAAAATGTGAAGAGAGAGAGAGAATAGAGGTGGGAAAGATAGAGAGAAATTTGTGAAAGATAAGAGTGAGAGAGAAGTAAAAAAAGTGGGTTTTAAATATGAGATTAAAAAATTTATGAGATTATGAAAGAAAGTGGGACCCACAAAAAAAGATAAAATAATTATAAATTTACAAATAAGTCCTCAAAAAAGTAAAAAAGTAAATGACCAATTTAGTAAATTCACCAACCCTAAATTTTCTTATATAGTTAGTTGAATATTAGTATTCGTTGCATTTCACCTTACCTGATTTGTAAATGAAAAAAAGATTAGGTAGAAAAAAGTTAGCAGACTAACCTGATAAACGAAAGTAAATTAAAAAACTCAGAAGCAATGTTGTCTATATTTTAAAAGGTATAAATTCACTTTGAATCTTCAAATATGTTTAGCTCACCATTTATTTATTTATTTATTTTTACTTAAAAAATATAAATTCATTCAAATTTATAGCATAAATCGAAAACAAGAAAAGTTTAGCATTGCTAAAACAAGGAAGGGTGATATTACCAAAAAAAACAATTTTTTTTAATTTCCGAACAAATTTTTAGAGAGAAAGATGACCAAAAAATGATTCCAGCTCACCATTTATTACTTGTAAAATATATTTTTTGTTTTTTGTTATTATAAAAAATAAACTCGCTGTACCACGCGGAACACCTTTTTCTGAGTCTTAATTTTCTATTTACTTTGCTTATTATTATACCACCCAACCCAGCCCTCGTGTGCCACGAGCAAGTTTACACCGCGGTCCTATGTCACCAATAAATATGCATAGGAAAAAAATAAATTTATTTTATCACCAAAAAAATATTTATTTTATTCTTAATTTTGGGTGCTTATAGGGTGAAAGATTAAATTAAATCTTTCACCGGAGAAACACTAAAATTGACCGTTGGATGTAGTATAAAAATCCATCAATGGTTGAGATTTAATATTGGTTGATTCAATCTTAACTATTAATAGCATTTTAAACAATATTCAATGGTCAATTTTAGTGTTTCACCGGTGAAAAATTTGATTTGCTCTCTCACCCTAAAAATACCCCTTAAATAATTTTATGAAAATCAAAACAATTTTCTGTACAACAAACGGTGACCCAAATTTCTGTCCAAAAATAACAACGATGTTAATCACGTGTAGATGAAGGTGTGCCCTCTTAAAATATGATTATCTTTGGATCTGATGTTAACATTTGGCAAGGAATCAAATCAAATTGACTATTTTATCTTTTATTTTATTATACGCAAAAAATGAGTCCAATTAATAAGTGCTATCGAAAATTCTTTTAAGAAGTAAAAAGTATAATACTGTATTGATAAATTATAAATTTTATATTTTAATAATTATTTTTTACTAAGATACACTTTATTCTGAGTATATTTTAATTATTAATAATCAAATTAGTAAAAAACTTTTTATTATTTATTTATGCATTAAGATAATCAATCAATAATATCTGATAAAAAAACAAAATGAGATAATAAATATATTTATTTAACTAAATTATTGATTATGATTATGGTATGATTATTAAGATAAAAACAAGAAAGAAAGTTGGTGATGGATCTATAAAAAAAAAAGGAGTTGGTGATGGGGAAATGAGAATGCATATAAATTGAGTGCAGGCTTTGGCAGGAGAGAGTGTGTTGTGTTAGTAATAAATTAAAGACAGCAACATTTATAATACCGAAATACTATTTAGGCATATTCTTTCTTCTTCCCTTCTAATCAAATTCCGTTGCTATTAACACTGTCTTTCTCAGATCACAGATCTAATCCATTTCTTAATCATTGCCACACTCTCCATTTTCTTCCTAAAGAGGGTGTTCTGTTGAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF18376.4	MDD_C	204	404	2.10E-68
PF00288.29	GHMP_kinases_N	115	173	1.60E-07

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0016301	kinase activity	Molecular Function
GO:0000987	cis-regulatory region sequence-specific DNA binding	Molecular Function
GO:0046983	protein dimerization activity	Molecular Function
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function
GO:0045944	positive regulation of transcription by RNA polymerase II	Biological Process

InterPro

InterPro term	Description
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
IPR020568	Ribosomal protein S5 domain 2-type fold
IPR041431	Mvd1, C-terminal
IPR036554	GHMP kinase, C-terminal domain superfamily
IPR006204	GHMP kinase N-terminal domain
IPR005935	Diphosphomevalonate/phosphomevalonate decarboxylase
IPR029765	Diphosphomevalonate decarboxylase

trEMBL

trEMBL term	Description
A0A075EAU8	_

SwissProt

SwissProt term	Description
MVD2_ARATH	Diphosphomevalonate decarboxylase MVD2, peroxisomal

KEGG

KO	Description	Enzyme
K01597	diphosphomevalonate decarboxylase	[EC: 4.1.1.33]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G54250	GHMP kinase family protein
Medicago sativa L.	MsG0180006027.01.T01	_
Oryza sativa L.	LOC_Os02g01920.1	GHMP kinases ATP-binding protein, putative, expressed
Cucumis sativus L.	Csa022127	_
Glycyrrhiza uralensis Fisch.	Glyur000002s00000233.1	_
Codonopsis lanceolata	Cl_chr07_15800T	_
Arachis hypogaea L.	AH19G38140.1	Diphosphomevalonate decarboxylase like

Expression pattern