Gene detail

Detail information of Am02G035130.1 Annotation

Gene ID	Annotation
Am02G035130.1	homocysteine S-methyltransferase 3

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G035130.1	mRNA	Chr02	187860930	187865339	+

Sequences

CDS:

>Am02G035130.1
ATGGAGTTAGGAAGGTTTATGAGGGATTTTCTCGACAAGTGTGGTGGCTCCGCTGTCATAGACGGTGGCTTTGCTACTGAGCTTGAACGCCATGGAGTAGACCTTAACGACCCCCTCTGGAGTGCCAAATGCCTCTTCACTTCCCCACATCTCGTCCGAAGGGTTCACCTTGATTACCTTGACGCTGGAGCAAACATAATATTGACATCATCTTATCAGGCAACTATTCAAGGTTTTGAAGCTAAAGGATTCTCTAAGGAAGAGGGGGAAGCTATGCTTAGAAGAAGTGTGGAGCTTGCACAACAAGCTCGAGAAATTTATCATGACAGATGTACTAAAGATTCTTCAGACTTCTTGAGAGATGAAAGATATAGAAAGCGTCCTATCTTAATTGCAGCTTCTGTTGGAAGTTATGGAGCCTATTTAGCGGACGGATCCGAATATAGAGGGGACTATGGTGATGCAGTGACTGTCCAGACACTGAAAGATTTTCACAGGGAAAGGGTAAAGATTCTTGTTGATGCTGGTGCTGACTTAATTGCATTTGAAACAATTCCAAATAAGCTAGAGGCACAGGCTTATGCTGAGCTTCTTGAGGAAGAAGGGATAGAAATTCCGGCGTGGTTTTCTTTTTCTTGCAAGGATGAAAGCCATGTGGTTAGTGGTGATTCTATCTCAGACTGCACTTTAATAGCTGATTCATGCAGACAAGTCGTTGCTGTTGGAGTCAATTGCACTGCTCCTAGATTTATTCATGGCTTGATTTCATCTATTAAAAAGGTAACAAGTAAAGCAGTGATTGTATATCCAAATAGTGGAGAGACTTATATTGCTGAGAGCCACCAATGGGTGAAATCAAGTGGTGATGCAGAGGTAGATTTTGTTTCTTACGTGGGAAAGTGGCGTTATGCTGGGGCTTCAATTTTTGGTGGATGCTGCAGGACTACTCCTAATACTATTAGAGGCATAACTGAGGCAATATGCGAAAAATCTCATGGCAAATCTATATAA

Protein:

Promoter(3k):

>AM02G035130.1
ATTCTTTAATTAAGCTACTTTGACATCAGAAATAACAATTATCAACAATGAAACGATGGCCAGAAGGAACATACCTGCATACTGCATAGACAATTATCAAACATTGACAAATGGTGATTAACGAGTAACAGGGACAATGATACCTGCAGCGGCAGTTATCAAACAAAGGCAATTATCAATCATTGAGAGACTCGATTTAAATAACCATGCAAAAATTATAGACATTGAGTTTTACATACATACGCATATAGGAGAAAATATATTCAGGGGAGGGAGAGAACCTGAGAGAGGGCTTTCCTTAAAGAAGATTCCTCTGCTATTAGTCACACACAGAAAGCAAAATAAGAACAAATTACATACTGAAAGAGGAGAAAGATATGGAAATTGAGAGGAAGAAGTTACCGAGAGAGATTATGCACCGATCGAAGATGGGAAGCGCAAATTTTCCAGCGACAACTGGACGCATAAAAGCACAAATTGAAGAAAGGGTTTGGGAAAGAAAGGGGGGCTCGTGTTTTGGAATCACAAATCGAAGTAGGGAATTGGAAATAGGGTTTGAAATGAAAAGCGGAGCTCAAATTTTTGGAAGAAGAGGGATTTCAGAAATTGCGGGAAGCGAAAACGTGAGAGGAAAGGTTATGTAGCGATAATGATTTGTGCATTCCGTCGGTTCACAATCGCCACTAAGTAGCGAACCAGAAAATGAAACTCATTGAATTAAGTACCATGTGCTTGTCTTGGCATCAAAGAATTTCCCACAAGCAATGTCCTTTTGATGCTCATCTTGTTATTTTTTAAGACTATCTTATTCTTAGATACTATCTCAGACACACTAACCAACCACAGAAAACCTTTGTTTGGCACATATAGTTAGAGAATTTTTTTTTCACATAGCTGGAAAGGAGCTCAACAGAGAAAATCTAGATACAACTGCAAAGAGCAAAATTGAACAGACCACTTTAATAAACATTCCCATCCATCTCCTCACATTCTCAATAACAATAAAATCTTTCCCTTCATCATTTATAGGTAGGTAAGTATGTATCAACCCTTCTTCACTTCATCTTCTATTTATCTCTCTCTAAAAATTAAAATTAAAGTTAAAAAAACACCAAAAGCTTGTTTCCTTTCCTTCTGTATTTCCTTTTTGTTGTTACTGTTTTAATTTCATTTACAGTAACTCGCAAAAGCAAAAAAAAAACATGAACCATTAAACTTTTCAGAGAGAGAGAGATTGATGACTTACCGACTACGAGAGAGCGACCAACAAAATCTGGCGGAGAGCGACGAACGACGGCGGAGAGTGACGAACGACGGAGGAGAGCGAAGGCTGTTTCTTAATTACTTTGTGCTTCACGAAATAAATCTCTGGATTGCTCAAATCAGAAATTTCAGAATATGACAAACACAAATGAACAGAAACAAAACAAATCACAAACCTGATGATGCGTGATTCTGGGAAGAACGACGGAAAAATTATTAGCGTTTCTGAGAAGAGAAAGAGGAAATCGGATAGGGTTTTTGAAAAGAGGGATGCAACGAGATAGCGTTTCTGAGATGGAGGCATATCGTTTTAGAGAGAGACTCAGTGTTTCAGAGAGGCTTAGCGTTTTTGAGAAGAGCAAAGTGTGAGAATCGAAATCGGTTTAGCCTTCTCAGAAGATCTTGCGAGAAGTTGGAGAATCAAAATCAAAATCGTTTCTAAGATTTTATTTTACGGTTTGGTTTGAAGATCTAGATTTTGGGTGCTGGAGGATGACATTTGCGGGAAAATGAAATAGGGTGAATTTTAGGATTTGCAAGGAAACCAATAACTATGCGCGCCCATGCACCGCGTCGGTTGCTTGTGGCTTGCCTTCGGTTAACAACGGACGGGAAATCCCGGACTTAGAAACAATCTCCATCCATTTAACGTCAGTTGAGGGCACGTGACGCCAATCAAGTGACGTGAAACTCCTTTTTTCTTGTAGTGATTACTCCCTTCATGTTTGTATATAAGCAAAAAAACGACTATGCACACTCTTAAATAAATTATTTAATCGTCTAAAAACAATTAATAAAAGAAATGAGTCATAAATTACACCCTTACCTAGGAAAAAGAAAAGTTTCGAAACCAAAAATTACTTTCATCGAGAAAAAAAAACAATTAATAAGAGTAAGTTTGATACATTGACTAAAAATAATTTCAACATTCTCATAGTATTTGGTAAATGAATAAGTGAATATTTCTTGCTTAAAAATAAAAACAAAGAAAATATATATTATACTTTTGTAGATTTCAAGCACAAAAAAACTACACTGGTGAAATTCTTTATTTCTTTTGAGAAATAGAGAGAATCTCATTTCAATCCACCGAGTTCTCAATATTTACTACCTTTGGAGTTTGGTCTTATATATAAGAGAAAGAGTAAAACATATTGGTACCGTAAGAAAAATACGATGCAGTTTGATTCAACTTTCATTATTTGCGAATGAGTGCAAAAAGAGATCCCCGATTCAAACCTTCAAATCTAACATTCTCCCCCCACTAACATTGCTTATAAAAAAACTTTCATCATTTGCGGGGCCATGAAGTATTGTTATAGAAGCCAAGTTTAAACCGTTGTTTTCTTACCATTCGTACACAATTCTATTTGCCGTACGAGAAAATTATAGTTTTAAGTTCATTAAATAAGAGATGCATTTAGTCTATATTATAGATCAAATACATGAGCTATTTAATGAATCTAAAAAACATTTTTCTTTTATAGAGTACCGAGGAAATATTTATTAGCATTTATTAACGATGAGAAGTCAATAAGGGTTATAATAGTATATTCGCAATATCCTCATTCTACGAAATAGAATAAAATTCATGCAAATCTAAAAGGAAAAGGAAACAGAAATGATGCTATAAATAATGAGTAAACACATCAAAACAATACGCCGTGCACAACTCAGCTCAAAACTCTGCTCTGTTCTGTTCTTCAAGTTATTCAAAAGCATATATCTATTGCAGTG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02574.19	S-methyl_trans	19	326	5.90E-81

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0008898	S-adenosylmethionine-homocysteine S-methyltransferase activity	Molecular Function
GO:0008270	zinc ion binding	Molecular Function
GO:0033528	S-methylmethionine cycle	Biological Process
GO:0032259	methylation	Biological Process
GO:0061627	S-methylmethionine-homocysteine S-methyltransferase activity	Molecular Function

InterPro

InterPro term	Description
IPR036589	Homocysteine-binding domain superfamily
IPR003726	Homocysteine-binding domain
IPR017226	Betaine-homocysteine S-methyltransferase, BHMT

trEMBL

trEMBL term	Description
A0A1S2Y082	_

SwissProt

SwissProt term	Description
HMT3_ARATH	Homocysteine S-methyltransferase 3

KEGG

KO	Description	Enzyme
K00547	homocysteine S-methyltransferase	[EC: 2.1.1.10]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G22740	homocysteine S-methyltransferase 3
Medicago sativa L.	MsG0780040660.01.T01	_
Oryza sativa L.	LOC_Os10g28630.1	homocysteine S-methyltransferase protein, putative, expressed
Cucumis sativus L.	Csa025417	_
Glycyrrhiza uralensis Fisch.	Glyur000008s00001293.1	_
Codonopsis lanceolata	Cl_chr08_13570T	_
Arachis hypogaea L.	AH19G41950.1	Homocysteine S-methyltransferase 3 like

Expression pattern