Gene detail

Detail information of Am02G034160.1 Annotation

Gene ID	Annotation
Am02G034160.1	myb domain protein 19

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G034160.1	mRNA	Chr02	185284555	185285846	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM02G034160.1
GATATTTATCAAATGTCGGCCTGTTAGATATAAATTTAGTGATTGATTTTTAGAGATCTTTGTGAATTTGCGTTCGTTTTTCGTAATAAAAGTCATTTTTTAAAGACAATAATAATGTTTAACTTGTTCTAATTCAATAACAAGAAGTGATTTTTCCTCATACAAAATTACTATAAAGGCCATAAAAATAACCTTAAAAGATATAGTACAACTGGTGTATCTTACTATCTATTAACCAAATAATAGTCGGCAGATAATGATTAGGTAGAATAAGATAATGGTGAGACTTAAGTTCAGAATAAAAAAGCTATTCGTGCACACCGTGCTTCAAGTTTTGCTAGATAAAAATACGCCCTTTTGTGCTTCTGCCTGCACTGTTGGGTAATTTGGTTACAAGTCTCTCAAAGTTCATACAGGTTTACAATAGCTATCCACATGTTTAAAAGGCAATTAGAGAAGTCTTTGTTTCTTAGTCCTCATCAAATATCATTATTATTTTTTTTTTATATCATTTGACAAACTCAATTTTCTTGCTCCTTAGTCCTTAATTTGAGAGGCCTATTTACTTCTAATCATGCGCGACAATATTCTTGTATACTCACTGTGTGGGTGTGGATGTTTAACAAAAACAAATATTTTAATCTAAAGGAAAATTTTGCAAAGAGACTCTAGGAATTATTTAGCAGACGTATTAGAATGAGAAGGGATATAATAATTTTATATTGGAAACATTTCAAAAAGTGTAATTCTCTGGAATATGATCATTTTTTTCCTAGCTTGTGTAATTCTCTGGAATAAGTTAGCGGGGCTTACATGTGCTTGTGCCAACTACGTTTCTGCACTCTTATTATTTTTTACTAGAGTTAAATTACAGTTAGAGAAGTTGCTAGATAATTAGTTGTAAGGTTGTTAGAATCTGTTAGGACAGTTAAATTTGGTTAACACAGTTGCCTTCAACTAGCTTGTAAATTTTAACCACATGGCTAAATGAGTTCATAATGTGATTGTAATTTCTGTACTGTACTCTTTTTTTTTGACAGATTCTGATTTCAGAAATGAAACTCATTTGTTATGATGAAATAAAATCTTCAAATATTTTATTTATAGTATCAATTATTAGACTGCAACAGACCTAAACTAGTCTCATGCACCTAATTATTATTATTATTATTCTGTTTGGTTATATTATCTGTAATTCATATCATATGAACTAATGCAACAGAAGTTGATCCTGTGGCTGCTGTATATCCATTATACTAAGCCATTCCAAACAATCCAAATTTTCCAAATTAATTTACTGGTTACCAGAGATATCTAAATACTATTTCAAAAGTTCAAATTTACTGATTTGGTTTTGTTGTAGTCTATCTAGTATCCAATATGTAACTTGGTTAAAATACATTTATAAAAGAGAGTTTACTTCAAATTGCTTTATCCAGTTCATCAAAGTTTACTGTTTTTAATTTTTTATCTTGATGTAAGGCCACAATTAATGCAGTCATGTTCTTACTGCCAAATTGTACAAATGTTCCTTTCACCAAAACAATAATGGAAGTGTAATAGCTCTAGTAAGGACAAATTTTCTCCTATTGCAACTTCAGCAACAAAGACTTTTAGATTCTTCAAGCCTTCCTTATTAGTTATTAGCTGTTTTTGGTTTTTCTTTCGTCAACTGCATACATCAGCCACAGACAGTGGACAAAAACTTGGTTTCTTAACTGCAATATTAATCTTGTAATAAAAATTTTTACATCCATAAAAGAGGAATTTGAAGAGTTTTATTTTATTTATTGTTTTTTTAAACCATTTCGGACATTCATTCAAATTTAATATGCTTAATTTGTCTTTTTGTGTCATATCTTGCCAAAACTAATCTTTTTTTGTTACCTTACACGAAATTGCAAATAAACACTATACATACACACTATCCAATAGACACACATTGGTTCAAACACGAGAGTCAACTTCCTTATATCGTTGAAATTGTCAATACACTTAAAAACATCTATAGAGAGAAAATTTCTCTCTAGATCGATCGAACGGCTCTGCAGGCAGGTCACAGATACCCAAGTTTGTTGGAGCAATTGCAATGTAGCTGCTGCACACAGTCATTAAAATGATCAATTTCGCGTGTTTTTATATGTTTGAATATGTATATAGGTTACAATTAGTTACTCTAATAACAATTTGAGACGATCAAATTTTAAACTAAAGAGTATCTTTTTTGGGGGGCCAAAATTATAGAGTATAAAACTTTGTTAATTGCTCATGGGCGGCAGAGAATGTGTCGGTACGAGACAAATGTTGACTTGAATAAGCCTAGAAAAGTTACTAGGAATAAAATAAAGTGGCTCAAAGAATTGTCCCCAATCCTTTGCTTCATTTCCATTATTTCCTAGTCTAGCTGGCTAGAGAATATGATGAAGTAGTATATATCATCACTTCAATTTAATTTAATTTAATTTATGTCGTAGGTAATGACTGAAGTGAAGTCTCTAATCATATCTTTTTAACAAACCCTTTCACATAAAATAAGACTTTCATAGTATTATTAGTAGGTAAAGAAAAAATAAAAATAAAGACTTCATCTAGTGTTTTTAATTACCATATGATTTACTTTTGGTAGTTTTGTCATAAAAAATGGTTATAATTGTCATTGGAGCAAAGAAATATGTTTAAAAAATGACACATTAGGTTCCCACATTTTCCAAGTTGGCACCCTTTTCAGCCTGCAAGGGTGAATTTGAGTAAGGTGAGGTGAGAACATGTTTTCAACTCATGGGACAAGACAGAATCATTTTCTGCTTTGTTTATACATTTGTTTTGTCATTTCAACTCTAAGGTAACAAGCACGACTATTTCATGTTTTATATAAATAACTGTGCTTATGCACTATTAATTCCCTACCATACCAACTATTCTTATTCTCACCCTCTCTCTGATTCTGCTCCATATTATTGTGTAGTAGAGAATTCAAGCTTACCATTGAAGTGAAACAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	15	62	6.40E-30
PF00249.34	Myb_DNA-binding	68	113	6.40E-30
PF13921.9	Myb_DNA-bind_6	18	77	9.10E-20
PF13921.9	Myb_DNA-bind_6	71	120	9.10E-20

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0005506	iron ion binding	Molecular Function
GO:0000976	transcription cis-regulatory region binding	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0010597	green leaf volatile biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A8B8M6L1	_

SwissProt

SwissProt term	Description
LAF1_ARATH	Transcription factor LAF1

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G52260	myb domain protein 19
Medicago sativa L.	MsG0180005461.01.T01	_
Oryza sativa L.	LOC_Os04g45020.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa018538	_
Glycyrrhiza uralensis Fisch.	Glyur000276s00017159.1	_
Codonopsis lanceolata	Cl_chr03_47440T	_
Arachis hypogaea L.	AH15G35920.1	Transcription factor LAF1 like

Expression pattern