| Gene ID | Annotation |
|---|---|
| Am02G033080.1 | 3'-5'-exoribonuclease family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G033080.1 | mRNA | Chr02 | 182619856 | 182632316 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01138.24 | RNase_PH | 71 | 203 | 1.70E-20 |
| PF03725.18 | RNase_PH_C | 232 | 298 | 2.20E-14 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0000467 | exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Biological Process |
| GO:0071042 | nuclear polyadenylation-dependent mRNA catabolic process | Biological Process |
| GO:0005737 | cytoplasm | Cellular Component |
| GO:0016075 | rRNA catabolic process | Biological Process |
| GO:0000288 | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | Biological Process |
| InterPro term | Description |
|---|---|
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR027408 | PNPase/RNase PH domain superfamily |
| IPR033100 | Exosome complex component RRP45 |
| IPR015847 | Exoribonuclease, phosphorolytic domain 2 |
| IPR001247 | Exoribonuclease, phosphorolytic domain 1 |
| IPR036345 | Exoribonuclease, PH domain 2 superfamily |
| trEMBL term | Description |
|---|---|
| A0A2Z6MT65 | _ |
| SwissProt term | Description |
|---|---|
| CER7_ARATH | Exosome complex component RRP45B |
| KO | Description | Enzyme |
|---|---|---|
| K03678 | exosome complex component RRP45 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G60500 | 3'-5'-exoribonuclease family protein |
| Medicago sativa L. | MsG0280007020.01.T01 | _ |
| Oryza sativa L. | LOC_Os02g34570.2 | exosome complex exonuclease, putative, expressed |
| Cucumis sativus L. | Csa006488 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000269s00013890.1 | _ |
| Codonopsis lanceolata | Cl_chr06_03520T | _ |
| Arachis hypogaea L. | AH15G06930.1 | Protein ECERIFERUM 7 like |