| Gene ID | Annotation |
|---|---|
| Am02G032800.1 | pumilio 4 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G032800.1 | mRNA | Chr02 | 181762759 | 181769055 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00806.22 | PUF | 649 | 683 | 7.00E-86 |
| PF00806.22 | PUF | 688 | 718 | 7.00E-86 |
| PF00806.22 | PUF | 721 | 754 | 7.00E-86 |
| PF00806.22 | PUF | 793 | 828 | 7.00E-86 |
| PF00806.22 | PUF | 831 | 863 | 7.00E-86 |
| PF00806.22 | PUF | 866 | 900 | 7.00E-86 |
| PF00806.22 | PUF | 912 | 939 | 7.00E-86 |
| PF07990.15 | NABP | 324 | 385 | 5.50E-83 |
| PF07990.15 | NABP | 385 | 644 | 5.50E-83 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0003723 | RNA binding | Molecular Function |
| GO:0005737 | cytoplasm | Cellular Component |
| GO:0005730 | nucleolus | Cellular Component |
| GO:0006865 | amino acid transport | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR033712 | Pumilio, RNA binding domain |
| IPR001313 | Pumilio RNA-binding repeat |
| IPR033133 | Pumilio homology domain |
| IPR012940 | Nucleic acid binding NABP |
| IPR016024 | Armadillo-type fold |
| IPR011989 | Armadillo-like helical |
| trEMBL term | Description |
|---|---|
| A0A1S2XXX9 | _ |
| SwissProt term | Description |
|---|---|
| PUM4_ARATH | Pumilio homolog 4 |
| KO | Description | Enzyme |
|---|---|---|
| K17943 | pumilio RNA-binding family |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G10360 | pumilio 4 |
| Medicago sativa L. | MsG0180005181.01.T01 | _ |
| Oryza sativa L. | LOC_Os02g57390.1 | pumilio-family RNA binding protein, putative, expressed |
| Cucumis sativus L. | Csa010703 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000106s00011707.2 | _ |
| Codonopsis lanceolata | Cl_chr06_27240T | _ |
| Arachis hypogaea L. | AH09G34860.1 | Pumilio homolog 4 like |