Gene detail

Detail information of Am02G031970.1 Annotation

Gene ID	Annotation
Am02G031970.1	ATP-binding casette family G25

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G031970.1	mRNA	Chr02	179218514	179225650	-

Sequences

CDS:

>Am02G031970.1
ATGCCAACACCAACAACAACAACCACACCGTTTGGTAGCGTGGAAACTCCAAACAGAGACTCATCCAACAACACTCCCCGAGAATCGCATGACCTTCCTCCTCCTTTACTCTCTTCTTCTTATCCTATCACTCTTAAGTTTATCGACGTGGGATACCGACTGAAGATAGAGAACAAAAAAGTGAAAGGAGGCTGCATCAAGAAGTTAATTACGTGTCACGAATTATCACCGTCTGATCAGAGATCAACGGCAGGAGCGACGCAAGAGCGAATCATTTTGAATGGGGTAACCGGAGTAGCCTACCCAGGAGAGATCCTAGCCGTCCTGGGCCCATCTGGGAGCGGAAAATCAACGCTCCTAAACGCCCTTGCAGGGAGGCTTCATGGAAATGGTCTTACAGGAACAATACTCGCCAACTCCTCCAAACTCAACAAACCGATTCTCCGGCGAACAGGGTTCGTTACACAGGACGATATCCTCTACCCTCACCTAACGGTGCGCGAGACACTAGTCTTCTGCTCCATGCTACGCCTCCCAAGGACGCTATCGCGTGAGGCGAAGGTGGCGGCGGCGGAGTCGGTGATCGCGGCGCTAGGGCTTAGCAAGTGCGAGGACACTATAATTGGGAACAGTTTCATCCGCGGCGTATCCGGCGGTGAGCGGAAGCGCGTGAGCATCGCACACGAGATGTTGGTGGACCCAGTGCTTCTGATCCTGGATGAGCCTACTTCAGGCTTAGACTCGACGGCGGCGCATCGGCTTGTGTCGACGCTGGGGTCGCTGGCGAGGCAGGGGAAGACGGTGGTGACGTCGGTGCATCAACCGTCAAGCCGTGTTTACCAGATGTTTGATAGAGTGCTGGTGTTGTCGGAAGGGAACTGCTTGTACTACGGCAAAGGAACCGACGCTATGGGGTATTTTGAGTCGGTTGGGTTCGCGCCATCCTTTCCGGTTAATCCGGCGGATTTTCTGCTTGATCTGGCTAACGGTGTTTGCCATAGTGTGGATGGTGTAAGTGAAAAAGACAGACCAAACATAAAGCAAAATCTAATTCAATCATACAACACATTACTTGGTCCCAAGGTAAAATCCATGTGCATGGACACTGCCAATGTTGCAACAAAAGACACACACCCTTTGAGAAGCAGCACATCAAAAGAACGTAGACATAGTGACAGGGTTAGCTTCTTTGATTGGTTTTACCAATTCAGTATACTTCTCCAAAGAAGCCTCAAGGAAAGAAAATACGAATCCTTCAATACACTGAGAGTCTGTCAAGTTATTGCAGCAGCATTACTAGCTGGTTTAATGTGGTGGCACTCAGACTTTAGAAACGTTCAAGATAGACTCGGCCTTCTGTTCTTCATTTCCATCTTCTGGGGTGTCTTCCCTTCTTTCAACTCAGTTTTCGCATTCCCTCAAGAACGTGCCATCTTTGTCAAAGAACGTGCTTCTGGTATGTACACATTATCTTCCTATTTCATGGCACGAATTGTTGGAGACTTGCCCATGGAACTTATTCTTCCCACCATTTTCCTCATTATCACATACTGGATGGGTGGACTGAAACCTGAGTTATGCTCCTTTCTATTAACTCTGTTAGTTGTTCTTGGATACGTGCTTGTGTCACAAGGTCTTGGCCTTGCTTTAGGTGCATTAATAATGGATGCCAAACAGGCTTCTACTGTTGCAGCAGTGACAATGTTAGCATTTGTTTTAACAGGTGGTTACTATGTCCATAAAGTTCCATCTTGTATGGCTTGGATCAAATACATATCCACAACTTTTTATAGTTACAGGCTTTTGACTAGAATTCAGTATGGAGATGGCAAGAAAATTTCATATCTATTGGGTTGTGATCATGGTGGTAGTGATAGAGCTAGCTGCAGGTTTATGGAAGAAGATGTTGTGGGGCAAATTGGTGCTGTGGGCTGCATTGGGGTCTTGTTTTTCATGTTTGTGTTTTACAGATTATTGGCCTACCTTGCTTTGAAGCGCATCAAGAGTTGA

Protein:

Promoter(3k):

>AM02G031970.1
GTATATGATCATGAGTGGGCAAGTGCGACTAGTATTAGAGCATATATCAGGTACTTATCTATTGATGTTTTTATTGTTGTTGTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTAATTTGTATACATTTTTATTAAAGGTATTTGTACTATGAGATATTGGTCCCAACGGAACAAACACAAAGATATGTGTTCATATGCCCTGAGACTACTTTTCTACTTAACATCCCTCTGGATAAAACAATGCCACAAGACTATATAGACAAGTGCAAGGAACAAATGGAAAGAAACAAGGTAGAAGTGAAAGCCAATATCGATCGACGCTTGGCGCTATCGCATGAATTAAACTGTGATTCTTTGTTTTTGGCACCCATAAACTTAGGGTGAGTGATTTAATCTATATCAGTAGTATATAATATGTATTTGTGAAATAATCCTTGTTATTAATTTGATTATTCAAAAATTTTATAGGAATCATTGGATATTGTTGGTGATTGATCCCAAAAAAGACCTGATTTGCTATTTGGATTCGCTGGGACATTACAACAACTACCCCAAGTTGGTGGGAGTATTTAATAGGTTTGTTATTAGATCCTTCGCATATTTCATATTTTAGTTTATCTATGTATTTCGATTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGATGTTGTTTCAGTGCTTTAGCAACTTATTGGTGATTGCGTAATGTCAGGACTTCGTACAGAAAATCAACACCTTCTACAAAATGGAAAACAATAAGAGTAAGTTTATAATTAATATTCTTATGCATATGTTATTTAATTAAATTTAATAACTAATGTTTTGTTTCATAGGGTCCCAAACAATCAAATGGCGATGATTGCGGGTACCATGTAATGAAATTTATGAAGGATATCATCACTCGCCAACAAATGACAATCCCAAACAATGTATGTAATTTGATAATTTGTTTTTTAACAAGTAATTAAATATTTAATTGATATTTAACTAATTTTAAGTTTATTTTCTTTTTTCAGTATTTTCCTGAATATGTGTCTGGAGCTCCAATGTCTGATGAGGAAATCACCGAGGTCAGAGGAGAGTGGTGTCGTCATGTTATCAATTTGATTCATGCAAATCGAAATTGATGTAAATTTTATAGTACCTCATTGGATATGTTGTAAATTTTGTTGATATTTTGGTACATGAGCATTTTGTTGAATTTTGGTACATGAGATACTTTGTTGATATTTTGTTGAAATTGATGTAATCCCTTCTTTATAGAATTTGGTTTGAAACATATGTTGGATAGATATCTGTATGCTGGAAAACTGGTTGCTGGTTGCAGGGAAGCTGAGAATTGGTAATTGGTAATACTGGCAATAGAAGAAACAAGCAAAACTTTTTTTGAAAAAAACTTAGGAATAGGGAGCTCTTTAAGAGAATAAGCGCTACTTATTTGAAACAAAATTAGGAATAGGGAGCGCTTTAATTACATAAGCGCTACTTATTTAAAATGAATGAGGAGCGCTTCTTAAATAAAGCGCTACTGATATTCCTCAGCGCATTAGGCATGAGGAGCGCTTTGTATAAAAAGCGCTACTCATGCGTAATTTTCAGGAGCGCTTCCTGAGCGCTACCAAAGAGAAACAGTCAAGAGTAGCGCTAACATCAGTAGCGCCCGAAAGCGCTACTTATTAAGAAATCTGTTGTAGTGTGAAACGACTCAAAGTGACATATAATATAAGACAAAGAGAGTAGTATTTACTCAATATGATTATTGAATTTTTCTCAAAGTCAAACTCTAAGGGTATGTTTGGGAGGGGAAGGGACGGGAGGACATATTTTTCAATTATAAATTGAGGAAGTTATAAAATGTCTCTGAACATAAATCAAGTGTCATTAAAAATGTTATATCGTTATTTATCAAGTTGTTCTTTTATTTTTTTTTAAATCTCAAATATATAATAAAATATGGACCAATCTTTTTTAAGCCCTCCCCTCCGTTCCCCTCCCAAAACCCCCTCCCAAACATACCATTAAGCTTACTTTTCCTACGAGATGAATCTTCACCTCATTCTTCTCCTTCTCATCTCTCTCTCCCCTATCTCATTCCTCTCTCTCTCTCTCCTCACCTCTCGTATATATTCTCATCTCATGAACTCTCCCCCTCTCGTTATCTTTCTCCCCTCATCTCTCTTATATTTTCTAATTTCATAATCTCTCTCCCTGGTCTCTCCTTTCTCTCTCCCTTCTCTCTCCTGCATGGAGAAGTGTGGAGAAGAACACATTGGAGAAACATGGAGACACACGCGAGAGGGATTATTTGCAGGGGAGATAGAGAGTAGATTGGATGTGCAACAGTGCATCATAAGATCCGTGTGAGTTCCAAATCTAATAGTCAAAAAATATAAAGTTTATTTGTGCGCGCGGTACACAATCTATTGAGACAGTGTCCCGTAGAAAAAACCCATATGTTGAATCCTGAAGCTACTTCACATATTATTATTTTTACAAAAAAAATATATAAAAGTCCAACTTAGACATTGTTTTCTTTTTTCATAGTGAGATATAAAGAAAGAAAAAGCTAAAGAAGAAAAAGAAAGTGGACACTTTCCGATTATATATGATGAATCATTTTGAGCAGCCGCTAACCTCAAACATAAGATAGCCACGTAGCAGTCCCCCGAAATATTGTTAGTTCCACTTTGACGTGTCAGTGGCATATGAGTCCGGATCCCTCTCCCTCCATAAATACCCCTTTGTATTCCTATCCCTTCTTCCTCTCACTTCATTCACTACTACTCTCACTTCTCTCTCTCTCTCCTTTTCATACCATACCATACCATCATTCCAACCTCCTTCTCTTCTCTTTTTGTCCCCTAACAACTTAAGAGAGGAAAAAAAAAACAAAGTAACCAAAGCAATA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01061.27	ABC2_membrane	401	606	1.20E-38
PF00005.30	ABC_tran	94	244	5.30E-26
PF19055.3	ABC2_membrane_7	273	369	7.40E-16
PF12698.10	ABC2_membrane_3	452	656	3.50E-10

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0140359	ABC-type transporter activity	Molecular Function
GO:0055085	transmembrane transport	Biological Process
GO:0005886	plasma membrane	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR013525	ABC-2 type transporter
IPR003439	ABC transporter-like, ATP-binding domain
IPR043926	ABC transporter family G domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A1S2XY45	_

SwissProt

SwissProt term	Description
AB25G_ARATH	ABC transporter G family member 25

KEGG

KO	Description	Enzyme
K05681	ATP-binding cassette, subfamily G (WHITE), member 2

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G71960	ATP-binding casette family G25
Medicago sativa L.	MsG0180005298.01.T01	_
Oryza sativa L.	LOC_Os11g07600.1	ABC-2 type transporter domain containing protein, expressed
Cucumis sativus L.	Csa007333	_
Glycyrrhiza uralensis Fisch.	Glyur000097s00008282.1	_
Codonopsis lanceolata	Cl_chr02_22320T	_
Arachis hypogaea L.	AH09G35220.2	ABC transporter G family member 21 like

Expression pattern