Gene detail

Detail information of Am02G031870.1 Annotation

Gene ID	Annotation
Am02G031870.1	protein tyrosine phosphatase 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G031870.1	mRNA	Chr02	178982975	178988791	+

Sequences

CDS:

>Am02G031870.1
ATGGCCGGCTATCACGCAACTCCCTCCTCGGTATCTTCTCGCGAGAAATTGAATTTCTCACCCGATTTCCCACCCCGAATCCCCCTCACTTCTGATCAGGTCAAACACTGCACCGAAGCACTCGCCTTACTGAAGAACAAGCTCCGCAACCCCAACACTATCTCCCACGAGTTCGCTCACTTGGAGGCGAATAGGATAACACCGAGTGAGATGAAGAGAAGATGTATCGTAGCTCTTGATGCTGTCAATTTGAACAAAAATCGATACACAGACGTGTTGCCATTTGATAATAACAGGGTTGTTCTCGAATCGAGTTCAGATTATAGGCCTGCAGCAAAGGGGTATATCAATGCAAGCTTTATCTCGACTTCCTCTCCTGGAACTGTGTCCCAGTTTATAGCCACACAAGGCCCACTGCCACACACTTTTGAGGATTTCTGGGAAATGATTATTCAATATCACTGTCCTGCAATTGTGATGATTACTAGGTTGGTCGACAATTATAAGATGGTGAAGTGTGGAGATTATTTTCAATCTGAGGGTGGACCTAGAGAATTTGGCAATATATCTCTTTCCTGTAAATGGGCGAAAAGTACCGAGACTTCATTGGTTCTGCGCCATTTGGAAGTGAACCGTAGAGAGGTAGAAGATACACCATTATCTATTTTGCATATTCAGTATCCTGAATGGCCCGACCATGGAGTTCCGAATGATACTTCATCTGTGCGTGAAATTTTGAAAAGATTATACCATTTGCCACCAAATCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGTAGAACCGGAACATACTGCACAATTCACAACACAATTCAGAGAATACTTGCTGGTGATATGTCTGCTGTAGATATCGCTAACACAGTATCTGTGTTTAGGTCCCAGCGCATTGGAATGGTTCAGACCCAGGATCAGTACATTTTCTGCTACGAAGCTATCGTAGATGAACTGGAAGACCTTGTATCTCAACAGTAA

Protein:

Promoter(3k):

>AM02G031870.1
GTTAATGGGTCGGGCTCCACCGTATGGGAATCTGGGACTTCCAACATGGGTGTCTCCTCTGCCACACTTCATGAAAATGGAAACTTTGTTCTCTCTAATGGCACAACCTCTGTCTGGTCAAGCTTTGAAAACCCCACTGATACCGTTGTTCCGTTTCAGAACTTCACTTTTGGTATGGTTTTGCGTTCTGGGTTGTACTCATTTTCTGTTCTTAGACCCTCAGGGAATCTCACTCTCAATTGGAGTGATAGTGTTCCTTATTGGGACCAAGGTTTGAACTTTAACTCTTCAATGAGTATGGTCAATTTGAGTTCTCCTTTGTTGGTGTTGCAAAAGACAGGAACTTTGCAGGTTCTTGATCCCAATTTGGGTGCTCCTGTGGTGGTTGCTTACAGCAATGACTACAATGAAGGAAATGATGATGATATGTTGAGGGTTTTGAAGCTTGATGGTGATGGGAATTTGAGGATTTATAGCTTTAAGAAAGGTAGTGAGACTATGAATGTAGGATGGGTTGCTGTTGAGGATCAATGTGAGGTTTTTGGTTACTGTGGAAATAATGGTATATGTAGTTACAATAATTCCAACCCTATTTGTGGATGTCCATCTCAGAATTTTGAGATGGTTGATATTAATGATAGTAGGAAAGGATGTGTGAGGAAAGTGAGGGTTGAGGATTGTGTAGGGAGAGTAGCTATGTTGCAAGTGGATCATACTCGTTTCTTAACATATCCTCCTCAGTTTGTAATCAATCCTGAGATATTTTTCATTGGTATATCAGCTTGTAGTGGAAATTGTCTTTCATCTACTTCTTGTTTTGCTTCTACTTCTTTGTCAGATGGAACTGGACTTTGTTACATAAAGACTGGTAATTTCACTAGTGGTTACCAAAATCCTGCTTTACCTAGCACTTCATTTATCAAGGTTTGTGGACCAGTGGCTCCGAATTTGCCGCCTTCATTGGAGAATGTTGGAGAAGGGAAGGATCATAGGATTCATACTTGGATAGTTGTTGTAGTTGTTTTATGTACCCTCTTAGGTTTCCTTGCATTTGAGGGTGGTTTATGGTTGTTGTGTTGTAGAAATAAGAAGGGATTAGGAGGTTTTGCTGCTCAGTATGCCCTTCTTGAATATGCTTCTGGTGCACCAATTCATTTCTCTTACAAGGAACTTCAAAGGGCTACAAAAGGGTTCAAGGAGAAACTTGGTGATGGGGGATTTGGTGCTGTTTATAGAGGAGTTCTCGCTAATCAAACCGTTGTCGCAGTTAAACAACTCGAGGGCATCGAGCAGGGCGAAAAGCAGTTCAGGATGGAAGTTTCTACCATAAGTAGTACACATCATTTGAATTTAGTGAGGCTGATTGGTTTTTGCTCTGAAGGGCGTCACCGACTTTTAGTATACGAGTTCATGAAAAATGGTTCTCTTGATAACTTTCTTTTCGTTAGTGATGAATTGTCGCGAAAAGCGTTGAATTGGGGATACCGATACAACATTGCGTTAGGAGCTGCTAAGGGATTGACTTACCTTCACGAGGAGTGTAGAAACTGCATTGTTCATTGTGATGTGAAACCTGAAAACATTCTTTTAGATGAAAGTTTCAATGCAAAAGTCTCAGATTTTGGCCTTGCAAAGCTCTTAAGTCCAGTGGATCACAGACACAGAACCTTAACAAGTGTGAGAGGTACAAGAGGGTACTTCGCTCCTGAATGGCTTGCAAATTTTCCCATAACTTCTAAATCAGATGTTTATAGTTATGGTATGGTTTTGTTGGAGATAGTTAGTGGTAAAAGGAACTTTGAAATCTCAGAAGAAACAAATAGAAGAATGTTTTCTATTTGGGCTTATGAAGAGTTTGAGAAAGGTAACATAATGGGAATAATTGACAGAAGACTTGGTAGTCAAGAAATGAACTTGGAACAAGTGAAAAGAGTGCTTTTGGCATGTTTTTGGTGCATACAAGAGCAACCATCTCAGAGACCAACAATGAGTAAAGTTGTGCAAATGCTAGAAGGTGTAACAAATATTGATAAGCCACCAGCACCAAAATCCATTACAGTAGGATCTTCTAGTGGAATTAAAAGCAATGCCACTGATATTTCCACTATTGCATCCTCATCATCAGCTCCAACTTACTCTCACTCTTCATCTTCGTTGCCTTGAGGCTTCTCCCTTGGCTTTAGATGAAACACAGAGAACATGGCTATCCCTTTGATGTCAAATTTATATAGCATTACTCCTCCTTTTTATTGTTATCTTGAAGATTGTTGCTTGATCACTTGCCATGTGGTTTATCTATGCAAGCTTCAAACTAAATCAATGTTAATTAGGAGTTTTCTTCCAAGAATTTTGAGTCGTGTGTGCTTGAGAAATTTATAAGAAAATCATTATGATGATGAATGATAATAAAAAGTACCATAGTCTGGTGGGTATGTATATCATATGGTTCAATTAAATAACATGGACCTATTTTATATTAACGGGACTAGCATGAAATAATATACTCGGTAATAAAAAAAATCATTAAAATAGTATGTTAAACTTTTCTATTGTTACATTTAGTTCTTCAATCCCTTTCTATTTATTTAAATTTTTAATAATCGTAATGTTTTAAAAGTTTTACAAATTCAGTTAATGAAATATTCATCAAAAAAAATTCAGTTAATGAAATTGTTTAGACATTTCTTTACCTAGAACTCATCAATTAAAATATCAAATCTAAATTTATAAAAAAATCACAACAAAACCATTACGATTATTAAAAATTTAAATAAATAGAAAGGGATTATTACAAATGAAGTTGCCAAAAGAAGAGATGATAAACATGTGATTAGGGAAGGGAAAAGCAAAAAGCTAACAAAAGCCACTCACTCGGTCACTCACTCCCTCATCATAGTGAAACAGAGAAACCAAATTGTAAAAACCCAATCGGAGTTAACAACGCAACTGGAACTGGGGAATCTCGTCACCACCCGCTCTCGTCCCCGCCGGAGATCCGCC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00102.30	Y_phosphatase	83	322	5.90E-73

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0031348	negative regulation of defense response	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0005737	cytoplasm	Cellular Component
GO:0033549	MAP kinase phosphatase activity	Molecular Function
GO:0019900	kinase binding	Molecular Function

InterPro

InterPro term	Description
IPR000387	Tyrosine-specific protein phosphatases domain
IPR000242	Tyrosine-specific protein phosphatase, PTPase domain
IPR029021	Protein-tyrosine phosphatase-like
IPR003595	Protein-tyrosine phosphatase, catalytic
IPR016130	Protein-tyrosine phosphatase, active site

trEMBL

trEMBL term	Description
A0A1S2XZI6	_

SwissProt

SwissProt term	Description
PTP1_ARATH	Protein-tyrosine-phosphatase PTP1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G71860	protein tyrosine phosphatase 1
Medicago sativa L.	MsG0180005313.01.T01	_
Oryza sativa L.	LOC_Os12g07590.2	Protein-tyrosine phosphatase domain containing protein, expressed
Cucumis sativus L.	Csa007350	_
Glycyrrhiza uralensis Fisch.	Glyur000644s00020352.2	_
Codonopsis lanceolata	Cl_chr02_23750T	_
Arachis hypogaea L.	AH09G33510.1	Protein-tyrosine-phosphatase PTP1 like

Expression pattern