Gene detail

Detail information of Am02G030650.1 Annotation

Gene ID	Annotation
Am02G030650.1	dual specificity protein phosphatase (DsPTP1) family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G030650.1	mRNA	Chr02	174644745	174653132	-

Sequences

CDS:

>Am02G030650.1
ATGAACTGTCTTCAGAATCTTCCTCGATCCTCCTTTTTGCCCTTCGACACAATTGTTGCGCGCCACCACAAGAATCTTCCTCCCTCTTCTCTATCCCTCGCACTGGGAAACATCAGTCAATATAAATCTAATCACAATCGAAGTATGGCACTTAAGGCTGCTTCTGGTTCTATACCCAGTGCAGAGACAAGTAGCTCTGATGTGGATGAGGAAAAGTCTGAGACATACAGTAATGACATGACACAAGCCATGGGTGCTGTTTTGACTTACAGGCATGAATTAGGAATGAATTACAACTTCATCCATCCAGACTTGATTGTGGGATCATGCCTGCAGACTCCTGGAGATGTTGACAAGCTGCGTAAAATCGGAGTGAAAACTATATTTTGCTTGCAACAAAATCCAGACTTAGAGTATTTTGGAGTTGATATCAATGCCATACAAGAATATGCCAAGACATTCAATGACATTCAACACTTGCGTGCTGAGATAAGAGACTTTGATTCATTTGATTTACGGATGAGGCTTCCTGCTGTGGTTAGCAAATTATACAAGGCAGTAAATACCAATGGAGGTGTGACATATATCCATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCGTTGGCATATATGTTTTGGGTTCTGGGTTATAAACTTAATGATGCTAATAGACTACTTCAGAGTAAAAGATCGTGCTTTCCAAAACTGGATGCCATAAAAAGTGCAACGGCAGATATTCTTACCGGCCTGAGTAAGAAACCTGTCACTTTGTCATGGCGAGACAGCAATTGCTCTACAGTGGAAATTTCGGGACTTGATATTGGATGGGGGCAGAGAATGCCCTTAGATTTTGATGACAAACGGGGTTCATGGTCTCTCAAGAGGGAATTACTTGAAGGACACTATGAGTACAAGTACATTGTTGATGGGGAATGGACGACAAATAAGGACGAGCTCATAACCTCTGCCAACAAAGACGGCCATATCAACAATTTTATCGAAGTCCTTGATGATGCGGATGCTGATCGTGCCTCCCTTCGTGCGAGATTGACTAGCGATGATCCTGATCTCACAAAGGATGAAAGAATCAGAATAAAAGAGTTTCTTGAAGCTAGTCCAGACGAGGGTCTCTGA

Protein:

Promoter(3k):

>AM02G030650.1
CGCCCAATCGTTTTCTTGGCCCCTCAATCCTCATTAGCCACCTCACACTACGTAAAATGGCAAGAATGACGTGGTGACCATATTCTTAGTCTGAGAGGCTAAAAACCAGTATCGTAAGAATCGGTTGGACCAAGACCAGGCAATTTGGTGGTTGGTTCAATCCACTTTGAACCACTTAAAATCGTGTTGGACTGGATTGGACCAAGTTGAACCGTCTGAAATGCATTTTTTATTTTTTAATTTACTTTTTTTTCTAAAATTTAATATTTTTTTTGTTTTTTATTTAATTATTACTCATTTTGTTCAACCATGGTTGAACCGAGTGAACTAATTGAACCATGAGGTCTCTCCAGTTTAATCTCATGTCCGGTTGTAAAACATTGCTACTACTATTGTTCCAAAACTTTGGTTATCTTAAAAACCAATTTATAATTAACTCTCATATATGTTATTATATTTTTTATTTTAAACGTTAAAATATATTTTTTGGTCATTTAAGTTATTTTAAACTTTCGATTTTAATTCTTTAAGTTATCATATATTGGGGCTTGGGTCTCATTGTATGGCTTAACAACCCTAAATGACTTTGTGTACTAATACAATTTCTCCATTGAGTCATTGACCAACAAAACCCCCTAACTCTGCTTGATCCATGTTCAGCGCTCTCTCTTTGTAGTTTCTCCCCTTTTTCCACTTGTTTCAACACTCTCTACTAAGGACCCCTTCTTCATTTAAGGACAAAATACTTAATAGTGAACTCTTTAAGACTTGAGCACTCCATAAGCAACTCTCACTAGAGTTTCTTGGATCTATTATGTAGCACAATTTCCATATCAAGGGTATTAGGAGAAACCCAAGTCCTACATTGACTAGTGATAATGTATCAAAAGAGTATATATTAAAAGGGCATCCCTCACCACGTTCTAAGAAAATGATTATTGGTGTTGGTTAATTGCTATGTTATTTTTAGTTCAAACAATCTTCGTTCGTGTTTATGAGCAAATTTTGAATTAGCCAACACAAAGTTTATCAATTGAGAGAATCAAATCTGAGAACGGTGGATCAATTTCGTGTCTCAAGTAGCTTATGTCACTAGGCCAATGATGTTGATTTGTTAATTGTTATTGTTATATTATATTCTATTAATCTATTGATAAAAATAAAAAATTATGATAAGTAGTAAGTGGATGTGGATGTGATTAATTTACCGGATACATCTCCGCTCCGCGGTGAATTTGAAAGAGAAAAAAAAGAGACAAGTGATGATTAAAAAAGGGTCTTGTATTTTTTCTTCTTTTGTATCTCTATATTATAAGCGAGGCCAGTCCTTCAGCATGGACTGGCGCGCTTTTTTCCCCTCCCCCTCTGTTTTTTTTTTTTTACCTTTTAGCTCCTCATCTTTTTAAGTTTTTAGGGCTTATTGGATTGTTTTAAAAAGGTCTATATGAAAAATATGATTAGGTAAAAGTATTTAAGTTGTAATGCTAAGTAGTGTGTTTTGAGGTGCTTTAGAGTTCAGACAAAATTTTAGATGTTTAAATACATGGAGTTCGTTTCTCAATAATCAGTTTGGTAGAAAAATATAGTTTTATGACAAATTTTATAAAATGTGATGCTAAGCAGTGTGTATTTGGGTAAAATTTTATATGTTCTAATATGTGAAGTTCATTCCTCAATAACAAGTTTGGTGAAAAAAATCATGACAAAATATTTAAAGTCTTAAATTTACCCTCTCCCTCTTTTTTTCCTCTCTTTTTATTTATACTTTTTTTAGTAAAAATCCACACGTACTTAAAATGTGATGTTAAGTACTGTGTTTTGAGGTGCTTTATAGTTCGGACAAATTTTTAGATGTTTAACTACATGAAGTTCGTTTCTCAATAATCAGGTTGAAGTTATCAACCACCGCATACGGAGTGAATTTAATACTAACAAACTTTCCCTATCCCTCTTTTTTTGGCGCCAAACTTTCCCTCTCCCTCTTTTTTTCCTCTCTTTTTATTTATACTTTTTTACGTAGTGTGTTTTGAGGTGCTTTATAGTTCAGACAAAATTTTAGATGTAATAATCGGTTTGAAGTTGGCGGGTTGAAGGGAAAGTACTCTTGCAATATATTATGGCGCCAAAGGGCATTTTTGTGATTTTCTCACAACCTTTTTATGCATGTCGGCCAAGCGTGCCTATTTTTCTTCTTCTATTTTGATGCATCTTAACCAAGTGTGTCTATTTTTCATGGGTATTTTCGTCATTTCGGTTCAACTACTCATTGCATGTCAAACACATCCCACTTGAGGTGCCTCTCTTTCATTGGTCCTGTTTTCTTACATCCTCCACATGTCTCTCTTTTTCTTCCATCCGGCACATGTCACAAACTATCTATGTAAAACAGTTCTAAGTAGTGCATGTAAGACACATGTTCTTCACTTCATTAAACATCAGTGCCACATGTCTTTCTTTTTCTCCCATCTGCCACATGTCTTATTTTCCCCCCATCTACCACATGTCTCAAACTATCTATGTAAATCAATTCTAAGTATTGCATATAAGACACATCTTCTTCACTTCATGAGACCTCAGTGCCACGTTTCCTTTTGATGCATGTCAGCCACATTTGGCGCCAAATTTCAGGGGTATTTTCATCATTCAAAGAAAAAAATACAAAGTTTGTATTGCTGCTATATTGATATTTCAGCTGAGAAAGATAAATTAACCTATATATATAGCATCCTATATTTCGAATATCTTAAACTCATGTAACTGAGTCGTTACTGGCGCTCCCCGTGCATTGCACGGGCATTGAGACTAGTGTTTCCTAAATCTCAGACAACCCACCAATAAAAAATGTAGGGAAGAACCGCAAGAGAATAAAAAAATGGAAGCAAAGGGCTCTTAATAAACGAAATGAAATATCTCAGTCGACACAACACTAGTAGTACAAACAACACAGCTGAACTCAAGTGAAGTGAAGTTTCTCAGAATCTGAATTATTTTCTAATCGTC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF16561.8	AMPK1_CBM	256	340	6.50E-19
PF00782.23	DSPc	140	235	4.70E-13

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	CBM48

Gene Ontology

GO term	Description	Category
GO:2001070	starch binding	Molecular Function
GO:0000272	polysaccharide catabolic process	Biological Process
GO:0009501	amyloplast	Cellular Component
GO:0005634	nucleus	Cellular Component
GO:2001066	amylopectin binding	Molecular Function

InterPro

InterPro term	Description
IPR000387	Tyrosine-specific protein phosphatases domain
IPR029021	Protein-tyrosine phosphatase-like
IPR045204	Laforin-like, dual specificity phosphatase domain
IPR013783	Immunoglobulin-like fold
IPR014756	Immunoglobulin E-set
IPR020422	Dual specificity protein phosphatase domain
IPR000340	Dual specificity phosphatase, catalytic domain
IPR032640	AMP-activated protein kinase, glycogen-binding domain

trEMBL

trEMBL term	Description
I3SIE2	_

SwissProt

SwissProt term	Description
DSPG4_CASSA	Phosphoglucan phosphatase DSP4, amyloplastic

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G52180	dual specificity protein phosphatase (DsPTP1) family protein
Medicago sativa L.	MsG0180005005.01.T01	_
Oryza sativa L.	LOC_Os03g01750.2	dual specificity protein phosphatase, putative, expressed
Cucumis sativus L.	Csa010689	_
Glycyrrhiza uralensis Fisch.	Glyur000125s00010017.1	_
Codonopsis lanceolata	Cl_C01444_unscaffolded_00050T	_
Arachis hypogaea L.	AH19G30060.1	Phosphoglucan phosphatase DSP4, amyloplastic like

Expression pattern