Gene detail

Detail information of Am02G030350.1 Annotation

Gene ID	Annotation
Am02G030350.1	Homeodomain-like superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G030350.1	mRNA	Chr02	173825991	173829912	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM02G030350.1
TTCACGCGGTTATATCATGTAAATTTTTTATTTCCAAACAAAAAGAAATATGAAAATTTTACCTTACATACGCAAATAAAATGACTGACAACTACTTTTTAAGAGTATTTTAGTCATTTTGCAAGGTTGGGGTGTGTGTGTGTGGTTGAGTAAGGGTGATGTGGAAGAAGCATGGACCTATTATGTATTTGGGGTTTTTTTTTTTACCTCATCATCTCCTTATATACTCCCACAATAAATTTTAAGACGAAAATATCTCTTGTAAAATTGACTTAAATCGGATCTACCTTTGGGGAGGTAGATCCGATTCACAAAAATAAAAGGTGGATTTACGTATATCTAATTACAATTAGTGGGGGGAAATCGGATATAGCTTCAGTGAGGTATATCCGCTTTGTTAATTGCAAAAGCGGATGTACCTATCAGGTAGGTAACTCTGCTTTGCAATTAACAAAGCGGATATAGGTAAATCTGCTTTGCAATTAACAAAGCGGATATACCTATCAGTGGGGGTATGTCCGTTTTGTTAAAATGCAAATCGGATTTACCTCCCTGATAAGTAAATCCGATTTGTACTAAATTTGACGGGTAGGATTTGTCTGTCAATGTTGATCAACGGTGTAGATTGCACCGACAATATCAACAGTTGATAATCATTGAATAGAGGAGGCTGCTCCTCATGCTGCTGAGGCTGATGGTACGGCTCCTCCTGATACTGCTGCTGATAATACTGCTGCTGGTAGTCCTCAGGCATAGAATGGTCCTCAGACATAGAATGCTCATCAAGAGGGTGCCCCTGCTGGCCCTCCTCATAGTGATAGTCTGGGGCTGGGGCCTCCTCCACCTGCTGATACTGCTGCTGTCGGCTACGCCGGATAGACGCATGTCCCGCAATCCTGTGGCGGATGCGTGTACTGGGAGCAGATGGTGAGGCCTGGCCCGAGGACTCCCCTCGATACCTATTGGACACTGGAAAAAAACAAATTTAAAAAAAAAAAAACACAAAAAATACAAATCGGATCTAGCTATATCCGATGCGAAATCGGATATAGGTAGATACGATGTGAAATCGGATATAGCTAGTTCCGACTTACTGTTTTTGCGTGTTCTGAGGAAGATCGAATTTATGTAGATCCGATGGTAAATCCGGAAATAGCTCTCTCAAGGGTAAATCCGATTCTCTCAGTAAACTTTCTGGTCAAACGGATGCAAGTGAAAAATGGTAAATGTTTTGTAAATTTGTAAAAAACTTAAGTGTATTTTCGTCTTTTCGCAGGGTCTGTGGGGGGGGGGGGGGGGTATATAGGGATATGATGGGGGTAGAAAAAAAAACCCTATGTATTTTTGGTCAATATACGGATTCTATATTATGTACCCAAGTAAGGGCCCATGTTTATCCCACTCTCCTACTCACCAAACACCCCCAAACCTCAAAAATTCCAATGCTCACGGTTCGTCACGAGTAGCAAATAACTGGAAATAAATAAATAAAAGTCAGTTACTTTTTAAAAAAAACTGTTAGTTAGTTACTAAAAAAGTTAGGCTTAATCTGTACCTGTTCAGTTGTGAATGAACTAGTAAAGTCCATAACCAATGCGTCATTTGGGATGCCATCTCATCTTGAGGTCGCACCATTTTTTTCCATTTTATACTTCTAAGTCCCTACAAAAACGGAAAACAAAAGTAAAAAACATGTTACTGCACATTCTGATAACCTCGGAAGGTACGACAGTATTGTGTTGAACAGGTTCAGTTCTATGAAACCAGACGTGTATTACAATACAGGTATGGTTCCAAAAAACCGAACCGCTCCAGCACAATACGGTCGTGCCTGTGGACTCACAGAACCACCCCTTAATCAGAAATTTTTTAAGGTACAATGGTTATTCACCAAACCAAGCGCGAACTCAGGAAAAAACAAATACACACAGTTTTGGGGAGAAAAAATAATGGTTGGTAGGGATGATGATACCTTATTATGGTTGGCAATGTTAGGAAGATGAGTAAAAGGTTTATGATGTAGGTGAGGAGGATAGGGTATGAAGTGGAGAGATGGGAGGTGTGGGGTTTAGAGGGGAGTGTGTGGAAATGGAGGAGAAGAAGAAGGATGAAGGATAGGGGAAAATATTTTAGAGTGTTAGGGGTATTTTGGTATTTTCATAGGGTAAAGGGGGGAGGGTGTGGTGAGTAGAGGGGAGTGGGATAAGCATAGCCCCATGTAAGTTTGGAATATTGTAGATCCAATGGACTCACTGGTAAAGCCCACAATGTGGAATAACCAAGCCTTGTTAAGCCCGTAAAAAGGAACGGCGATTATGGACACATAATAAGAAAAACATTTATTGACCAAACAAAAAATAAGAAAAATATTTTTGACTCAAAAACAAAACGAAAAACAATGACGAAACAAAAAAATAAGAAAAATATTTTTGACTCAGAAAAAGAAAAAGAAAAAGAAAAACATTTGGATTATTAATGACGCGCAACCAGAGATATAAAAAAAAAGTCTTTAATTGTTTTTTGACAAACACAAAGTCATTAATAAATGAACCAATATACAAACACACTACTCCTCAAAGAAGAAAGAGTTGAGTTGAGTTGAGTTGAGTTGCATATGCATTGCACATTGAGCGATTGACACGAGAACCCTAATCTAAACCCCACGGAAAATGATTGATTGGAGGGAAACACCGGAGCGGCAAATCAATGCCACTGATTTTTATTTTAATTTTTTTTATGAAGAAAGGGAAAAAAGGCAGCAGAAAGTGACAAAATCACAGTAAAGCGTGACAGTGCCAGCTCCCTCTCTTCCCCAAAACCAAAGTCTTGTTCTTTTCACTTACCCATTTCCTCATTTGCCCCACCCTCCCTTTCTTCTCCCTCTTTCACCAAATGGGTCATTTCCATCTCCTTCCATTTCCACTTCCACTATAATAACAATCAAGATTTGTTTTTTCTTGCTTCTCTTCCTTGTGTGGTAGTGGAGTTTTCTGTACGAGG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF14379.9	Myb_CC_LHEQLE	135	180	8.10E-15
PF00249.34	Myb_DNA-binding	43	93	6.80E-07

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	CE8

Gene Ontology

GO term	Description	Category
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0016020	membrane	Cellular Component
GO:0003677	DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR044848	PHR1-like
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain
IPR006447	Myb domain, plants
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A1S3UYI1	_

SwissProt

SwissProt term	Description
PHL2_ARATH	Protein PHR1-LIKE 2

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G24120	Homeodomain-like superfamily protein
Medicago sativa L.	MsG0180004975.01.T01	_
Oryza sativa L.	LOC_Os09g12750.1	Myb-like DNA-binding domain containing protein, putative, expressed
Cucumis sativus L.	Csa000217	_
Glycyrrhiza uralensis Fisch.	Glyur000177s00010892.1	_
Codonopsis lanceolata	Cl_chr01_45740T	_
Arachis hypogaea L.	AH04G06100.1	Myb family transcription factor APL like

Expression pattern