Detail information of Am02G029970.1 Annotation
Gene IDAnnotation
Am02G029970.1 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G029970.1mRNAChr02172838228172848559-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF03909.20BSD2002531.40E-12
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0006360transcription by RNA polymerase IBiological Process
GO:0005675transcription factor TFIIH holo complexCellular Component
GO:0006366transcription by RNA polymerase IIBiological Process
GO:0006413translational initiationBiological Process
GO:0016020membraneCellular Component

InterPro
InterPro termDescription
IPR027079TFIIH subunit Tfb1/GTF2H1
IPR035925BSD domain superfamily
IPR005607BSD domain

trEMBL
trEMBL termDescription
A0A1S2XXH4 _

SwissProt
SwissProt termDescription
TFB1A_ARATHGeneral transcription and DNA repair factor IIH subunit TFB1-1

KEGG
KODescriptionEnzyme
K03141transcription initiation factor TFIIH subunit 1

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G55750 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)
Medicago sativa L.MsG0180000270.01.T01 _
Oryza sativa L.LOC_Os08g25060.1BSD domain-containing protein, putative, expressed
Cucumis sativus L.Csa011155 _
Glycyrrhiza uralensis Fisch.Glyur000095s00007044.1 _
Codonopsis lanceolataCl_chr04_52590T _
Arachis hypogaea L.AH14G02630.1Probable RNA polymerase II transcription factor B subunit 1-1 like

Expression pattern