Gene detail

Detail information of Am02G029880.1 Annotation

Gene ID	Annotation
Am02G029880.1	PB1 domain-containing protein tyrosine kinase

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G029880.1	mRNA	Chr02	172629489	172637696	-

Sequences

CDS:

>Am02G029880.1
ATGAGTAATGAGGATCCCAACAATTCAGGCAAGCAATGTAAAGATACATTGAATGTTGGGTCTAGTGATAGGATCCCTTATGATAAAGACGAAGTAGACAATATATGTTTACAGACTGGTGAGGAATTTTCTGCTGAGTTCTTACGCGACCGGGTTGCTTTAAGACGATTTCCCATCATAACTGATGTAGAGCAGCACCTGCCGAACAATCTGAATTTCCATATGAATATTAATAATAACAACAACAATTACCAGATGGTCTATGAGGATCTAAAGCACGTTCCTGGGCAAGAGAGAATGGGTTCTGATAGTAATATGGATTTGCCGGATAATGCTTTAGCCATAGGCTATGTTGCTGAAATTGACAACAGGGCTTATCCTAATAATTTGAGTAGATACCATTATGAACATGGTATTATCAGGCAGGCATCAGGTACATTTTCCAGACAATTATCAAGTAAGTTTTCTGGAGGATGTGATCAAGCTACTTCAGGATCAAATACTCCATCCATTTATGGTGTTGAGACTCCTCTTTCATGTCATCCTTATGGACCAATATTTTCAGAAGGTTCCTTTTATAAAAAGATAAAATTTCTATGTAGTTTTGGTGGTAGAATACTTCCAAGGCCAAATGATGGGAAGCTTAGATATGTGGGTGGAGAGACACGAATCATATCAATTAGGAAGAACATCACACATGAGGAACTAACAAGGAAGACTTATGTTATTTGCAATCAAACTCACATTATCAAATACCAACTTCCTGGAGAGGATCTTGATGCTCTTATTTCTGTTTGTTCTGATGAGGATCTTCATCATATGATCGAGGAGTATGAAGAGCTTGAAAGAGCTGGAGGCTCTCAACGACTTAGGATTTTTCTCATACCTTTAAATGAATCTGAGAGTCCAAGTTCTAATGAATCAAGAGTCAATCAACCAAGTGACACTGATTATCATTATGTTGTTGCTGTTAATGGTATGCTTGATCCAAGTCTACGAAAGAGACCTAGTGGGCTGAGTTTGGTAAGCCATACAAGCCAGTTTGGAAATACCTCTGATTACAACAGTCCACAAAGGGACTCATCCACATATGCATTTTCTTCTGATATAAAGGACTGTAGCCCAACCTCTACAAATTTGGCAGGCACACTCTCAAAACCTGATCCATTTTTAACAGCACTAAAGGTAGCAGGCAAGTCATTTAATCAGACGCCTCCCGCGTCTCCTATTTGTGTACAGCCTAAAGATCCTAAAATTTCTAATGTTCAGCTATTTACGGATCAACCATACAATGTTGTTATTGAAAGGATGACTCCCTTTTTTATGGAAAAAGTTCCACGTGACAACTCATTGTATGTAGACAGTAACAGCTATGTTGATCCAATTGCATATTATAAAAATTGTGCCCAAGGAACTCCATGTGTGAACTACCATCCTAGTAATCAATATATTTCAGAGTCTGGCCAAGTCAAGAGGCCTAGTAATGATTTTCATTTTCACAGACGAAACAACAGTAAAGAATTTGTCTCTTCTGCAATTTGTAGTCAAACTGATATGATATTTGAGAGACCTGTAGTTATAAATGAAGGTTCATATCATTTTAACAAGATTGTTTCTCACTCTCACGAGTCATCAAATGTATTCCCAGTGTCTGATGATAGGGAGGGATCTCAGTACAGACTATTGCATGCACTTTCTGATTCGACACTTCAGGAGAATGATGAGAATTACAAATGTCACTTGCAGTTTCCTCCTAATGTTGAGAAAGAGTCATCATTGGAAACTTCACGTTCTTTAGAAGAATGTTCAATACAACCAGGAGAGATAAGCGATATGAGCGAATGCAGAGGTAATTATCCCTACTCACCCACTTTTGGAATAACTGATAGTTGCAAGAGATTGTCAGAATTTAGTAAAGAGAACTTGCATTGTGCAGATAAAAGCACTGATTGGTTTGAAGAAAAAGTTGGAGCTATGTCACAAGACGGACATTTGCAATACATCTACTTCCAACATGGTGCTACCTCATCTTCGCCTGATTTACAAAGCACAGAATGCAATGCATATGCCGCACCGTTTATCTCTTCACAAACCACTAGAAACATGACAAAGCAACCACATGGTATACCGTTAGACACAGTTGCTTCTGAGTATTCCATGAGGAGTCAAAATTCGTCAATGCATCGCCAATATGCTCCGTCGGAGACAAATGGTAGTCAACCATCTCCCCTTGGCTCTTTTGAGTTACAACCTATGGAATCCCAAACCAACACTGAGTCTGTCCCACCTATTTCATATCCAGACACAGTTTCTTCTTCACTAAGAGATATGGTTGCCCCCAATGAGGATTCTGCATACTATCAGTACCAAAAGGAAGAAAACACATTCATTAACAAACATGCTTATGAATACACCGATGAATTTCGTGTCCACAAGACAGAATCAGTAGATATTGTCAACGAGCAAATTGATTGTATTTCTCCAGGTATTCAATCATGCTTACAATTTGTCTCAAATGTTGATGAAGAGGACAGAGTTGAACTTACATTTCCTGAAAAAGAAGGGGAAGAGTGTGCTAATCATGATTCTAAAAGTAAGCTTACAAAAGCCGATAGTGAAAACTTCAATAAGTCTGTTGGTGATGCATCAACTTCTGAAACAGAGCCTGAAGTTTATGGTTTACAGATTATTGAGAATAATGATCTTGAAGAACTGCAAGAGTTAGGATCTGGAACCTTTGGAACTGTTTATCACGGAAAGTGGAGGGGTACCGATGTTGCAATTAAGAGAATAAAAAGTAGTTGTTTCTCAGGTAGTTTGTCAGAGCAAGAACGGTTGACTAAAGATTTTTGGAGAGAGGCAAAGATCCTGTCAGCTCTTCACCATCCAAATGTGGTGGCATTTTATGGAGTAGTTCCAGACGGCCCTGGTGGAACATTGGCAACTGTGACAGAATATATGGTGCATGGATCATTGAGGAGTGTTCTCTTGAATAAGGAGAGAGTGCTTGACCGTCGTAGAAGGATCATGATTGCAATGGATGCAGCCTTTGGCATGGAATATTTGCATTTGAAAAATATTGTTCATTTTGATTTGAAGTGTGATAATTTACTTGTCAATCTTGGCGATCCTGAACGACCTGTATGTAAGGTTGGAGATTTTGGGCTATCAAGAATTAAGCGCAACACACTTGTTTCTGGTGGTGTTAGAGGGACCCTTCCATGGATGGCACCAGAGTTACTAGATGGTAACAGTTGTAGGGTATCTGAGAAGGTGGATATTTTCTCATTTGGCATTGCAATGTGGGAAATCTTGACCGGGGAGGAACCTTATGCTAACATGCACTGCGGTGCTATCATAGGAGGTATTGTCAATAACACACTCCGACCTTCTATTCCAAAACGCTGTGATTCTGAGTGGAAAAAGTTGATGGTAGAGTGCTGGAGTCCGGATCCTGCAGCTAGGCCATCCTTTACTGAAGTTAAAAATAGACTTCGTAACATGTCAGCTGCACTGCAGAAGAAGAGATATAATATTGGGAACCGATAA

Protein:

>Am02G029880.1
MSNEDPNNSGKQCKDTLNVGSSDRIPYDKDEVDNICLQTGEEFSAEFLRDRVALRRFPIITDVEQHLPNNLNFHMNINNNNNNYQMVYEDLKHVPGQERMGSDSNMDLPDNALAIGYVAEIDNRAYPNNLSRYHYEHGIIRQASGTFSRQLSSKFSGGCDQATSGSNTPSIYGVETPLSCHPYGPIFSEGSFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKNITHEELTRKTYVICNQTHIIKYQLPGEDLDALISVCSDEDLHHMIEEYEELERAGGSQRLRIFLIPLNESESPSSNESRVNQPSDTDYHYVVAVNGMLDPSLRKRPSGLSLVSHTSQFGNTSDYNSPQRDSSTYAFSSDIKDCSPTSTNLAGTLSKPDPFLTALKVAGKSFNQTPPASPICVQPKDPKISNVQLFTDQPYNVVIERMTPFFMEKVPRDNSLYVDSNSYVDPIAYYKNCAQGTPCVNYHPSNQYISESGQVKRPSNDFHFHRRNNSKEFVSSAICSQTDMIFERPVVINEGSYHFNKIVSHSHESSNVFPVSDDREGSQYRLLHALSDSTLQENDENYKCHLQFPPNVEKESSLETSRSLEECSIQPGEISDMSECRGNYPYSPTFGITDSCKRLSEFSKENLHCADKSTDWFEEKVGAMSQDGHLQYIYFQHGATSSSPDLQSTECNAYAAPFISSQTTRNMTKQPHGIPLDTVASEYSMRSQNSSMHRQYAPSETNGSQPSPLGSFELQPMESQTNTESVPPISYPDTVSSSLRDMVAPNEDSAYYQYQKEENTFINKHAYEYTDEFRVHKTESVDIVNEQIDCISPGIQSCLQFVSNVDEEDRVELTFPEKEGEECANHDSKSKLTKADSENFNKSVGDASTSETEPEVYGLQIIENNDLEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGSLSEQERLTKDFWREAKILSALHHPNVVAFYGVVPDGPGGTLATVTEYMVHGSLRSVLLNKERVLDRRRRIMIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIAMWEILTGEEPYANMHCGAIIGGIVNNTLRPSIPKRCDSEWKKLMVECWSPDPAARPSFTEVKNRLRNMSAALQKKRYNIGNR*

Promoter(3k):

>AM02G029880.1
TTCCTTCACTTCTTCATCAACTTAGTTAGGTGCAACTGCACCAGGAAGTCAGTGCTTCTGCACTGCTGGGCAAATTTATGCAAGAGTACTTCAATCAGTGTAATCTCTACCCTATTGATATCTCTTGTACTTTCATTTATATTAATATGTTTTATTTCATCTATCTTTGCCTTGCAATGCATATTATGAGCTAAACCTTTTTTGGTTGAGATGTTCTAACTTTATAATGAGCTTTTGAGTAAGTTATTGTGCCTTTAAGTGTTGCATGTATTTTGGGTCTTGTGTTATACTACATCCATCTTATTGTAAGGTTGATCGCTTAGAATAAGTAGAGTTATATTCACAGACATGGTTTATAACTAGAAATCAAGACTAATAAGGGTGAGTGTTTTAATGAAGGCTTTGTTAACTTGTGTAATAAAGAAAACTTTGTTAAGACCATGTTAAGTCCTAGACATAGGATAACATAGTCCTTAGGGTGAAACAGTGGGTACTTCAAAGGCAGGAGTGAACTTATTTAGCACGCCTAGACATAGGAAACTTGTAACGAAACTCTGAAGAAAGTAGCTGAAAGACATATACTCATGCAGCTGCACTCAATGCATCTGCACCTTGGTGCATCTGCACCACATAAAAGCACAAAACTCTCAAAAGTGAATTATTTAGTAAAGACATCTCAACTATCATTCTCAACTGATTTCCTTCATATTCTTTTACATATTTACATTCTGTTTTCCTTAAACATCAAATATCCAAAATTGTGAGTAGTGTAGTAGCACTAATTTATATGCTTTCTAAACATACAAAAGTTTAAGCAATCCCTGTGGGTTCGACCTTTCTTATCATTATATTACTTGTTTGTGACTGTGTATACTTGCACATCTTTATCATTTAAATTTTATCATCACTGTCTCCTACTCCTATTGTTATAGGTTATTTGTCTTATTTACAAGTTACCATGATATTTTTGGATGCGGAATTTAACATGTATTTTGTGTATATCTACTGAAATCTCAAAACCACATGATATTGAAAGAATGAGATCGGGTTCCATAAAATCCTAAATTTTGATATATGCATACAAATACATTCAGAAAATTACCATGATTTTTGCCTGATTACAATCACAAATTAGAAGATACATTCGACCTATATGTAGTTATGGATTTTACCTATGGTTGTTTGTGCAGGAAAAAATACTTCAATCTATTGTCCACGACTCTGAGAAAAGATTAACGAATTACAATTTGTTTATTTTATTAATTAAGTCGATCTGCCAATGTAAAATGGTTTTCTTCATACAGTAGAAATACATAATACACAATCATAAACATTTACAATATATACCAATATCTATTTACCTAAAATGTTAATTATAAAATATTTTAAAATTAAATTAAAAAAATGTATACCCGTGCAGTGCACGGGTCATACGTACTAGTATGTCTAATACTTAAAATGCTACTACGCTTGGAGAAGTAAAACACTACTAGAATTTATTTTTTGACAAAACCAATCATGTTATTACGTTTCACATGTATTTAACAACACATGCCAAAATAAAAGATATTTATAGTCTACACATATCGATATTCAATCATATATATTTATGTATTTTAGATATAGTTGGGGAGGTCCCCTATCTTTATGGGGGTCGTGTTTTGCAGCCCACATACCCGTCTCAAATATATTGGTCTTTTTTAATCTACAAAGGTGAATTTACAATACATTTATATATCTTCATAATATTTTAACATTAAAATAATTTCAATTTAAATTCAACAAAGAAGATGTAAGATGTATACCCATGTAGCTACATACTAATTTTGTTCATTTATATATGTATAAAAATTTAAAAATTTGTATAAAAGTCTTACAAGTAAAATTTTATCCTCAGTTATTACGACATGTATTGAAGTATTTATTTTTAATTTCTCATGCATTTTTGTTTTCAATGTTTTTCGGGTATAGTATGTTTTTAATATAAGATAAATGAGACAATTATATCTTGGTAAAATATAAAGAATAAATCTGATTTAAAGTGATTCCCTTGTTTTTCTCAACCGTTGATATCCATTCCGCGCCATTTTAAGCAAATGTTATTTTCCGACATCTCCGTCTCCGACCCTCATGGAATGTTTTCGCCTCTCTCTTCCTCAATTTCTCTCTCCCAAGGATCTCCTCTCAAACCAACCCTCTTTCTCTTCCCAACAAAATCAAATTTCAGCTCCCATTTTTTCTCTTCTGGGTTCTTCCAACCCAAAACCTTGCATTCCCAATTCAAACATTCTGCCAAACTCAAATTCACCCTCATCCTGCAGTTAATGAACACAAAGAAAACAGGTACTTTTTCTAATATTTTGTTTATCTTTGAGTTAATTAAACACAAAAATGCTTTCGCTTTAATTATAATTTTGTCGCACAGTTTGATTCTTTCGGTTCAATTTGAAAAAATGTTTCATTTTATCCCCTTCAATTAATTTGTATTTTGTTAATGTGTCTATTCTCCCAGAATTGAAGTTCTCAAACACATTTATGGAACTGGGGCACAAGTTCATTTTCAGGAGCGTGGATATGAAAATAGCAATGGCAGCACCACCGAGCCTTCGTATTTCTATTTTAATTGTCAATGGATTGATTATGTAGAATGCCCAAGAAATTTGTAGGTTCTCCACATTTTTAGTGAAGGGCAAAAACAATTATTTTACTTTCTCTGTGGATCTTAATTTTGTTTTTCGAGGGATTTAGTAACTATGTCACCTTCAGTATATGGCCAATAAGATTGGCAGTGTACCGTGTTTAACGTTTGGCAATTCTCTCTGTGCCAAATAAGTTGCCATGTGGAAAATTAGCTTTGAAGTGATAGGATGAAGATTTATTTGTATGACTTTGTGACTCAAATGGGTAAATTACACCAAGAGGAAACAAAGATGGGCATTGATAATTTAGTGCTTTAGTGAGAGAGTTGGTTTTGTGGAGCTAACTATATGCTCTTCCACC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07714.20	PK_Tyr_Ser-Thr	904	1165	1.00E-61
PF00069.28	Pkinase	903	1163	2.00E-47
PF00564.27	PB1	211	294	3.40E-19

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:2.1.4:TKL-Pl-6

Gene Ontology

GO term	Description	Category
GO:0005737	cytoplasm	Cellular Component
GO:0007154	cell communication	Biological Process
GO:0051716	cellular response to stimulus	Biological Process
GO:0005524	ATP binding	Molecular Function
GO:0050794	regulation of cellular process	Biological Process

InterPro

InterPro term	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR000270	PB1 domain

trEMBL

trEMBL term	Description
A0A1S3E2P5	_

SwissProt

SwissProt term	Description
RAF20_ARATH	RAF-like serine/threonine-protein kinase 20

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G04700	PB1 domain-containing protein tyrosine kinase
Medicago sativa L.	MsG0180004938.01.T01	_
Oryza sativa L.	LOC_Os12g40279.1	protein kinase domain containing protein, expressed
Cucumis sativus L.	Csa000202	_
Glycyrrhiza uralensis Fisch.	Glyur000095s00007048.2	_
Codonopsis lanceolata	Cl_chr08_36950T	_
Arachis hypogaea L.	AH09G22710.1	Serine/threonine-protein kinase CTR1 like

Expression pattern