Gene detail

Detail information of Am02G028850.1 Annotation

Gene ID	Annotation
Am02G028850.1	myb domain protein 111

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G028850.1	mRNA	Chr02	169608612	169614155	+

Sequences

CDS:

>Am02G028850.1
ATGGGAAGAGCTCCTTGTTGTGAGAAAGTAGGGTTGAAGAAGGGAAGATGGACAGCTGAAGAAGATGAGATCTTGTTAAAATACATTCAAGCTAATGGTGAAGGTTCATGGAGGTCATTGCCCAAAAATGCAGGATTATTAAGGTGTGGGAAAAGTTGCAGACTAAGATGGATTAACTATTTGAGAACTGACCTCAAAAGAGGGAACATTTCGGCTGAAGAAGAAGATACAATCGTTAAGATGCACACTACTTATGGCAACAGGTGGTCCTTGATAGCAAGTCACTTGCCAGGAAGAACAGACAATGAAATAAAGAACTATTGGAATTCTCACCTCAGCAGAAAAATTTACAGTTTCTCGAAAGCCACAAGTGCAGGAACAACAAGAATCATGGATATTAACCCTCCCCAGCGCAAAGGTGGTCGAACAAGTCGTTGGGCAATGAAGAAGAACAAAAACACCTACACTCAAAAAAATATTAGTACTAAAGAAAATAATAGTGAAGTTGCAGTTCCAATGGCGCCACCCACACCATCACTAGAAAGTGAAGGTGTGGAAAATGCAAAGCTGTTCGAGGAGGCGAGAAAAGAAGAAGAGGAGGTGGAAGAAGTAAAAAAAACAACATGTGATGAATGTGACGACATCATGGGACTATGTAATGAATTAGAAGAATTGGAAGACATTAATGGTAGAAGCGGTGGGGTGTTGTGTGTGAATCATGACATGACAATGGAAAATTGCATCGCGGAAGCAAGTGGGGTTACGAATTTAAATGAAGAGAGAGAAAACAATGTTATCGGCGTGGTGGTGGGTGTTGGTGAGGAAAATGAAAGAGCAAATGATGATGGTGATATGTGTTCTAAGAATAAAATGGCTTCAAGTCATGAGGACCAAATTAGCTCGAATAATAACATGGAAAGTACTAATGGAGAATGGTCTTCTAAAATGGATTTGAGTTTGGATGATAGTAATAACTGGGACTGGGAGAGTGTCATGGAGTTTAATGATGATGCACAAAACCTTCTGACATGGTTGTGGGAAGAGGACGATTTGGATAATGATAGTAAAATGTTGGCAGAGATTGATCCTCAAAAACAAAATGACTTGATTGCTTGGTTTCTCGAGTGA

Protein:

Promoter(3k):

>AM02G028850.1
TGTTTGGGATTGAGCACCCCTAGTATTCTTTTAAATTAATCAACTATTTATAAATAAATACTAATCCAAAAGTAACATCATGTTTTTTTTGACAATATTAGTACATCATATAATGAATATCTTTCTCAGTTTTCTTTTGACAAGATTGTTCTCAGTTTGGTCAAAAAAAATATTGTTCTCAGTTATTAAATAACTTATAACCAATTGATATATTTAAATGACAACATCATGTTAGTTTTTTTATAAAATTATTTAAATTTAATATTATATATGCACGGAAATGGTTTCTCGTGTATCGCACGGGTTACATACTAATATTATGTCATTATCCACAGGTTGGGTGTGTTTGAATGTAGATGGCAACGCTTTAGCGAATTCGGGAAGGGCCGGTTTTGGGGGTGTTCTCCGTGATAGTGATGGGACTTTTATTCGTGGTTTTTATGGATCTATTGGCATATCGGATGCGATGCATGGAGAGGTCATGGGGCTTCTTCATGGAATATTCGTTTGTTGGCAGATGAAATTTCCAAAGGTTGTTTGTCACACGGATTCCCAATATGTCTTAAATTTGGTGTCACACGGTAATCATGATTTCCACAAGCTTGGTAATGAGATTGCTATTATTAGGAGTTTTCTAACGAAGAATTGAGAGTTTCAATTGGTTCACACTTTGAGAGAGGGTAACCAATGTGCAGACTTCTTGGCCAAAATTAGGGGTGTTCAGTGGTTCGGGCAAATCCAAACCAACCCACGATCCAATCCAAACCGATATGTTTGGTTCGGATATTTTTCGTGTTCGGGTCAAAATCGAACAAATCCAAACCAACCCGTAGTTGTTTGGATCGGGCAACGGATTTTAAAAATCAAATCCGCGAACCCGAACCAACCCATATTACGTCATAATAATTTTGTAATTTTAGATGCACACGATTTTATTTGCTTAGAATTTTTACCTTAATAATTTATGATTAAGTTGTAAAATTTTAATACTATGAATGGGAAAGCTATTAGTGGATTTGAGTTTGATTTCGTGTGATTTTCAATTTTTTTTAGCTATTTAAAGTGTTGGAATATCATAAAAAAATGTTTTTTTTTTATATTTTAGAAAATTAATATTTTAGTGAATGACCCGTGAGCCCAATCCAAACCAACCCGTTCAATATCGGTTCGGTTTGGTTCGGATTTTGGAGGAAAAAATGTAAAATCCGATCCAACCCAAACCGAACAATTATCATTGGTTCGGGCAACGGATTTGGTCAAATCCGATCCAAACCGACCCACGAACACCCCTACACACACCGACTCGAGTCAAAGAACATTTGATTTACGTATATGAGATTAGGGGTGTTCAATGGTTTGGGCAAATCCGAACCAACCCGTAGCCCAACCCAATCCGAAGCATTTGGCTCGGATAATTTTCATAATCGGGTCAAATCCGAACCAACCCGTAAAGACCCGTACTAGCTTGGTTCGGATAACGGATTTTAAAAAATAAATCCAACCCAACCCGTATACCCGAACCTCTTTGTAACACTAACACTAGGAGTGATAGTTAGTATTCTTCTTTCACTATCTATTCACATACATTCATTAAAGCTATTTTCTAGGCACACCACTTTTCAAGCTAATTTCTCAATTCTCACACTAATTCACCACTGGATTCATCACAGCATTTATTCTTATTTACTCATGACAATTATGCGATACTGCGATTACACTAAAATCTTACATATTTCTTCTTCCCATGATTGCTTTTAGATTTGTTTTTGGCTCAGTTATTATTAGGGGATAATAACTTACACGAAGTAAAAAAAGAGTGAATTGTTAAGGAAAAAGTACTTCTTCATTATTCTGGCTTTTATCTTCATAAAAAATTGGCTATGTGAGAATCATGATATCTAATTAAGATCTTTGCTATTTTGATTGGAATTGTTTTCTAGAATTAAACATACTATAAAAACTACAACTTAAAATTTTCTTTTGGAATTAACATACGAGGACAAAGATTGTTTCCCCGACCCTTGCACTTGACTTGAGAACCATCTCTAACAATCTTTTTTATGTTTTAAAAAATTAATATTGATATTACATGACCCGCGAGTCCAATCCAAACCAACCCGTCTAATGTCGGATTGGTTTGGTTCGGATTTTGCATAAAAAAACACAAAATCCGAACCAACCCAAACCAAGTAAATATGATTGGTTCGGATAACGGATTTGGTCAAAACCGATCCAACCCAACCCGCGAACACCCCTAGCCAAAATGGGTGCTCACGCAACTGATGATCTAGTTATCTTAGATTCTCCTCCTAGGAACCTAGATCCCTTGTTATTAGCCGATGCAGGAGGGGATATTTTTGTAAGGCTTTAGGCCTCCTTTTTTTTTGTTTTTGTTTGAGCTTTTGTAACCAAAAAAAATATTATGTCATTATCAAATAATGTAAAAAAATCCGAAAATTATAGCTAATTAATGTGGGTCAAATGAGGTTATATTAGTATGGATGTGTTGAATGGCAAAACCACTAAAAAGGTTTATGCATGATTAATAGAATTGAATGTAAGGAGAGAGAAGAGTACTCGTAAGTCGTAATGATAACATCAACGTGGGAGATGGAAGCCCCCCGTAGGAGTGTATCGACGGTGGATGAGCCACGACCGTAGCATCAACGTGGCACATCTTCCACCACAGATACGTCAAAATCAATGGTCCCACACACATAGCACCCTACAAAGTTCTATAAAGTACTTCAACCGTTCTCTATACTTTTCACTATTGCATAAAGCTAGCACGAGCTCAGGTCATTTACACGAGTTGCAAATGACAACATAATATTAAAAAAAAGAAAGACATGCACTCGCCGTTCTCGAGCGCACTGTCTACTCTATAACGAGTGGGGTATATCGATATCTCATGTCTTTTGTAGTTTTCTTGGGGTACATTTTTGTTCATTTTTTAGGTTAAACCACATTCATATAGTAGACAAAACATATACCTTAGAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	14	61	1.90E-29
PF00249.34	Myb_DNA-binding	67	112	1.90E-29
PF13921.9	Myb_DNA-bind_6	17	76	3.30E-21
PF13921.9	Myb_DNA-bind_6	71	117	3.30E-21

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0010597	green leaf volatile biosynthetic process	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0016020	membrane	Cellular Component
GO:0090379	secondary cell wall biogenesis involved in seed trichome differentiation	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A396JRX5	_

SwissProt

SwissProt term	Description
MY111_ARATH	Transcription factor MYB111

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G49330	myb domain protein 111
Medicago sativa L.	MsG0180004814.01.T01	_
Oryza sativa L.	LOC_Os01g19970.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa012797	_
Glycyrrhiza uralensis Fisch.	Glyur000472s00019593.1	_
Codonopsis lanceolata	Cl_chr06_38500T	_
Arachis hypogaea L.	AH19G07920.1	Transcription factor MYB12 like

Expression pattern