Detail information of Am02G028630.1 Annotation
Gene IDAnnotation
Am02G028630.1 nuclear encoded CLP protease 5
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G028630.1mRNAChr02169055980169060676+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00574.26CLP_protease1052835.00E-81
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0004252serine-type endopeptidase activityMolecular Function
GO:0009534chloroplast thylakoidCellular Component
GO:0009941chloroplast envelopeCellular Component
GO:0005576extracellular regionCellular Component
GO:0016020membraneCellular Component

InterPro
InterPro termDescription
IPR029045ClpP/crotonase-like domain superfamily
IPR018215ClpP, Ser active site
IPR033135ClpP, histidine active site
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR001907ATP-dependent Clp protease proteolytic subunit

trEMBL
trEMBL termDescription
A0A8B8M4Y3 _

SwissProt
SwissProt termDescription
CLPP5_ARATHATP-dependent Clp protease proteolytic subunit 5, chloroplastic

KEGG
KODescriptionEnzyme
K01358ATP-dependent Clp protease, protease subunit[EC: 3.4.21.92]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G02560 nuclear encoded CLP protease 5
Medicago sativa L.MsG0180004787.01.T01 _
Oryza sativa L.LOC_Os03g19510.1OsClp4 - Putative Clp protease homologue, expressed
Cucumis sativus L.Csa003064 _
Glycyrrhiza uralensis Fisch.Glyur000487s00025916.1 _
Codonopsis lanceolataCl_chr06_38100T _
Arachis hypogaea L.AH19G14280.1ATP-dependent Clp protease proteolytic subunit 5, chloroplastic like

Expression pattern