Gene detail

Detail information of Am02G028320.1 Annotation

Gene ID	Annotation
Am02G028320.1	shaggy-related kinase 11

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G028320.1	mRNA	Chr02	168258018	168261656	+

Sequences

CDS:

>Am02G028320.1
ATGGCATCAGCGGGTGTAGCACCTGCTTCTGTATTAAGAGAAGTAAATGCAAGTTCAGTTGCTGGTGTTGATAGGTTGCCTGATGAGATTCATGGCATGAAAATTAGGGATGACAAGGAAATGGAAGCAAATGTGGTTGATGGAAATGGGACAGAAGCAGGACATGTAATTGTCACCACTATTGGTGGTAAAAATGGGCAACCAAAGCAGACAATAAGCTACATGGCTGAGCGAGTTGTTGGACAAGGATCATTTGGTTTAGTTTTCCAGGCAAAATGCTTGGAGACAGGTGAAACCGTGGCTATAAAGAAGGTTCTTCAAGACAAGAGGTACAAGAACCGTGAATTACAAACCATGCGCCTTCTGGACCACCCCAATGTTGTAACTTTGAAGCATTGTTTCTTTTCAACAACTGAGAAAGCTGAGCTATATCTTAACTTGGTACTTGAATATGTTCCTGAGACTGTCCATCGGGTGACCAGACACTACAACAAAATGAGTCAAAGGATGCCATTGATATATGTAAAACTTTATTTTTACCAGATATGTAGAGCACTAGCTTATATTCACAATTGTATCGGAGTGTCTCACAGGGACATAAAACCTCAAAATTTACTGGTCAATCCACACACCCACCAGCTGAAGCTTTGTGATTTCGGCAGTGCAAAAGTCTTGGTCAAAGGTGAACCAAACATATCTTACATCTGTTCTAGGTATTATAGAGCTCCTGAGCTTATATTTGGTGCAACTGAGTACACCACAGCCATTGACATTTGGTCAGCTGGTTGCGTACTTGGAGAACTATTGCTTGGTCAGCCTCTCTTTCCTGGTGAGAGTGGAGTAGATCAGCTTGTTGAAATTATCAAGGTTTTAGGTACCCCAACAAGGGAGGAAATAAAGTGTATGAATCCTAATTACACCGAGTTCAAATTCCCACAAATCAAAGCTCATCCATGGCACAAGATCTTTCACAAGCGTATGCCACCGGAAGCTGTGGACCTCGTCTCAAGACTACTGCAATACTCTCCAAATCTTCGAAGCACAGCTTTGGTGGCCTTGATCCATCCATTCTTTGATGAACTACGTGATCCAAATACCCGCTTACCAAATGGGCGTTATCTTCCTCCTTTATTTAACTTCAAAGCCAATGAGCTCAAGGGAGTGCCTGCTGAAATCTTGGTGAAACTGATTCCATCACATGCAAGAAAGCAGTGTGCCTTGTTTGGCTCATAG

Protein:

Promoter(3k):

>AM02G028320.1
ATAAGGTCTTAGATTGAAAGGAATGGTTCCTTCTTTAAGAGAAATTTTATGATCAAAAGTGAGCCTAGGGGTGGTAAGCTAGTAGGTTCAGCAAAAATATCAGCGTAAGTATCAATTAAATCAGAAATGGGGCCTAGTATAGCAGTATTTACCTCATCGGTATGTAGTAGATTGCAAGAGGGTAGAAAAAACTCTGCACAAGTGGAGTTTAAGTGCATAAAGCACATCTCAGCACCTTATTCAACAACCTTGGCAAATGATTTGTTGTTAATCAATTTGACTTGAGGGGATTTAGCACCTCTGAGAACGAACTTCTTGCTCTTAAATGTAAACTCCATTTGTAACATCAAAATCCCATAGAATAGGTCCAAGAGATCTAAGCCATTCAATCCCTAAGATCAGATCATAGCAACCCAAGGGAAGTACCAAAACATCAGCAGTAAACTCAGTTTGTTGGAAGGACCAAGTAAATCCCTTACACACATACAAAACTTGAAGCTTGTGGTCACCACCACCAGTGATGCTCATAGGAGCAACTTCTTCCAGTTTGCAACCTAGTTTCTGAGCCATTTCCAAATCTAGGAAATTGTGGGTACTCCCACTGTCAAGGAGCACTTGAATCATCTTTTTATCATGCAAGCCATTTACCCTCATGGTGTGAAAGTTGGAGAGTCCAGTGAGTGCCTGTAGGGAAAGTTGGGGTGGGTCAGTGGGTGTGGGAGGGTCTGTTTGGGTTTCTATGGGAGGATCAGTTTGTGTTTCAATGGGTGGTTCTTCTTCATCATCACTCAATTCAAGCACAAACATTTGAGAGTGTCTGTGTTTGAGTTGATGACCTGGTGTGAAAGGTTCATCACAAAACATGCAGAGGCCCTTAGCCCTTCTCTCTGCTTGTTCTGCTGCAGTGTAAAGGCGAGGTGTTTTAGGTATAATGGGTGGGGTGGACTGGTTTGTGGGGGAGGTGAGCTGTGAGGTTGAGCCAAGGGTAAGGGTGGGTCTGTTTGATGGTGGGAAGGGTTTAGTGAAACGTGGGGTGGGTTTAGAGGGCTTGGCAGCTTTAAGCGAGCAAAGTGAGCTGCTTGGGCAATGGTGGTTGGATTGAACATTCTCACATGCATTTGTGTTGAATGTTCCAAACCAGCAAGGAATATGTTAAGGGAGTGTTCTGGGATTAGGTTTACTTGGGTTAAGGCAAGCTCAAACTGGTCTACATAATCTTGGATCTTGCTGTTTTGCTTAATTTGGACAAGATCACTTAAAGGATCTTCATAAGGATCACCAAATATAGCACTCACATCAGCCACATATTGAGCTCAAGTAGGATAAATATCAAATTTTTGGCGCATGTAATTTAAATGCCACCGCAATGCTAAACCATCAAGATGGATAGAAGGAAGACGCAATCTATTCTCTTGTGGAGTCTCATCCAGTGAAAAAAACTGAGTACATTTGTAGAGCCAATCTTTGACATTTCTACCATCAAATTTAGGAAACTCTACCTTAGAGATTCTGGTGGCATAAGGCTGAGTAGGGTTAGGTCTAGGAGGAGGAGTGGGAGGGTTGATCACTGCAGGGGTCTGTTCACGCAGCATTGTACGAATCTCTTGCATATTTTTTGTCATTTGAGTGTTCATCATATTAATCCTTTCATTAACTTCAGCTTGGCCTTCCTCTATTTTTCTTTCAAGATCAGCAATAGACTGGGAACGAGTAACCATGATGGAAGACAGGAACGAAGCTCTGATACGAAATCCAACAGTATAATTTCATATCAGTGAAGGACAGAGTATTAGGGTTCACTTAAGAACCGTTAACGCTCTTGATTCAACCCAGGAGCCACAATGGGAAGAATGCAGCTCGTTGAAGAAGAATCTAGGGTTGGTGCAGAGGATAAATGAGGTAAGAGAAGTTTTTTATAAAAATATGATATTGATTGCTTCTTACAATAGTGGTTGCTGCTATAAATAGCAAGGGGACTATGACAACTAATGATTGTACAATGACAGCAATGATTGTACCATTCATTAAAATATGCGAATCCTAGATATAAATGCGAATCCTAGGAATAAAATTTACCCACACTAGCTTCTAGAAGCTGAGGAATTTAATTCAACAGTAAAAAGTAAAAATTGCAACAATCAATTTAAACCTAATTTTGCAGAACAGGGGCAATTGACCCACACCAGCTTCTAGAAGCCGAGGGATTTAATTCAACAATAAAAAGTAAAATTTGCAGCAATCAATTTAAACCTAATTTTGCAGAACAGGGCAATAATGTCACAAGGAGGGGGGGGGGGGGGGGGGGGGTTTGGGTTGTTTAAAAAAAAATCCCAAAGAAAAAGGCAACGCTTATTTTTCATTGACGGTCAAAAGAGGGGGAAAAAGAAATGTTTGGGCGCTTTGTGTTGTTGTGTTGACAAACTTATGAGATAAGAAGAGAATCGGACACCACAAAACAATAACATCATCAATGATTTGCATTTGTCGGATTTTCTTTCTCCGTTTTCACTCTTTTGTCCAAATCCATTGTTCACATTTCACACACTTTCCCCTGAATCAGGATCCGTGAGTTCCTCTTCTTAAATCTACCTCCCTTATATTTCTTCTTCGATATATGTGTATATTTCTACAGTTGCTGTATTCTAATTTGTTTATTTCGGTAATCAACCTGCTTCTTTCGGTGATCTGTGATTGGCATCTTTTAATTATTAATTAATAATTAGGTTACAATCATTGCACACAAACTTTTTCTAGTTATTTTAATTTTATTGCTGTTCAATTGCAGACATCTGTGTTCCTTTGTTATGCTTCATGTCTAGTTTAGTATCATATTAATAATTGTCATTTTGGTATGTGCAGATTTTGCTGTTGAATATCTAGTTTGCTATTTAGGGTTCCGGTTTTACTCTAGCCAACACAACAGTGTGTATAACCTAGCCTATTATTTGAGATAGTTGAATTGAAGCTGCAACTAGAAAGAAATCTTCTTTGCCTGAGATA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	74	358	1.20E-62
PF07714.20	PK_Tyr_Ser-Thr	77	278	6.40E-24

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.5.4:CMGC_GSK

Gene Ontology

GO term	Description	Category
GO:0030154	cell differentiation	Biological Process
GO:0016020	membrane	Cellular Component
GO:0106310	protein serine kinase activity	Molecular Function
GO:0008270	zinc ion binding	Molecular Function
GO:0003677	DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR039192	Glycogen synthase kinase 3, catalytic domain

trEMBL

trEMBL term	Description
A0AAN9IL07	_

SwissProt

SwissProt term	Description
MSK2_MEDSA	Glycogen synthase kinase-3 homolog MsK-2

KEGG

KO	Description	Enzyme
K27413	shaggy-related protein kinase	[EC: 2.7.11.1]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G26751	shaggy-related kinase 11
Medicago sativa L.	MsG0180004763.01.T01	_
Oryza sativa L.	LOC_Os01g14860.3	CGMC_GSK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
Cucumis sativus L.	Csa001557	_
Glycyrrhiza uralensis Fisch.	Glyur000144s00012229.1	_
Codonopsis lanceolata	Cl_chr05_06310T	_
Arachis hypogaea L.	AH06G04880.1	Glycogen synthase kinase-3 homolog MsK-3 like

Expression pattern