| Gene ID | Annotation |
|---|---|
| Am02G027660.1 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G027660.1 | mRNA | Chr02 | 166586168 | 166589504 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 181 | 226 | 5.70E-123 |
| PF13041.9 | PPR_2 | 282 | 331 | 5.70E-123 |
| PF13041.9 | PPR_2 | 323 | 367 | 5.70E-123 |
| PF13041.9 | PPR_2 | 353 | 402 | 5.70E-123 |
| PF13041.9 | PPR_2 | 388 | 437 | 5.70E-123 |
| PF13041.9 | PPR_2 | 423 | 469 | 5.70E-123 |
| PF13041.9 | PPR_2 | 459 | 507 | 5.70E-123 |
| PF13041.9 | PPR_2 | 493 | 542 | 5.70E-123 |
| PF13041.9 | PPR_2 | 532 | 577 | 5.70E-123 |
| PF13041.9 | PPR_2 | 567 | 612 | 5.70E-123 |
| PF12854.10 | PPR_1 | 278 | 311 | 2.80E-115 |
| PF12854.10 | PPR_1 | 313 | 342 | 2.80E-115 |
| PF12854.10 | PPR_1 | 350 | 382 | 2.80E-115 |
| PF12854.10 | PPR_1 | 385 | 416 | 2.80E-115 |
| PF12854.10 | PPR_1 | 420 | 449 | 2.80E-115 |
| PF12854.10 | PPR_1 | 525 | 557 | 2.80E-115 |
| PF12854.10 | PPR_1 | 560 | 591 | 2.80E-115 |
| PF01535.23 | PPR | 287 | 314 | 4.30E-85 |
| PF01535.23 | PPR | 357 | 386 | 4.30E-85 |
| PF01535.23 | PPR | 392 | 421 | 4.30E-85 |
| PF01535.23 | PPR | 532 | 561 | 4.30E-85 |
| PF01535.23 | PPR | 566 | 596 | 4.30E-85 |
| PF13812.9 | PPR_3 | 273 | 327 | 3.10E-48 |
| PF13812.9 | PPR_3 | 306 | 363 | 3.10E-48 |
| PF13812.9 | PPR_3 | 348 | 389 | 3.10E-48 |
| PF13812.9 | PPR_3 | 377 | 432 | 3.10E-48 |
| PF13812.9 | PPR_3 | 518 | 573 | 3.10E-48 |
| PF17177.7 | PPR_long | 372 | 450 | 4.90E-31 |
| PF17177.7 | PPR_long | 470 | 606 | 4.90E-31 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
| GO term | Description | Category |
|---|---|---|
| GO:0031930 | mitochondria-nucleus signaling pathway | Biological Process |
| GO:0006397 | mRNA processing | Biological Process |
| GO:0004364 | glutathione transferase activity | Molecular Function |
| GO:0004519 | endonuclease activity | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0AAN9KBV6 | _ |
| SwissProt term | Description |
|---|---|
| PP326_ARATH | Pentatricopeptide repeat-containing protein At4g19890 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G19890 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| Medicago sativa L. | MsG0080048877.01.T01 | _ |
| Oryza sativa L. | LOC_Os11g39360.1 | pentatricopeptide repeat domain containing protein, putative, expressed |
| Cucumis sativus L. | Csa014762 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000651s00026841.1 | _ |
| Codonopsis lanceolata | Cl_C04371_unscaffolded_00020T | _ |
| Arachis hypogaea L. | AH04G29050.1 | Pentatricopeptide repeat-containing protein At4g19890 like |