| Gene ID | Annotation |
|---|---|
| Am02G027570.1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G027570.1 | mRNA | Chr02 | 166410908 | 166413283 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 69 | 116 | 1.50E-58 |
| PF13041.9 | PPR_2 | 273 | 321 | 1.50E-58 |
| PF13041.9 | PPR_2 | 374 | 421 | 1.50E-58 |
| PF01535.23 | PPR | 376 | 406 | 7.10E-48 |
| PF20431.1 | E_motif | 496 | 553 | 8.50E-17 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH28 |
| GO term | Description | Category |
|---|---|---|
| GO:0009451 | RNA modification | Biological Process |
| GO:0003723 | RNA binding | Molecular Function |
| GO:0043231 | intracellular membrane-bounded organelle | Cellular Component |
| GO:0033926 | endo-alpha-N-acetylgalactosaminidase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR046960 | Pentatricopeptide repeat-containing protein At4g14850-like, plant |
| IPR002885 | Pentatricopeptide repeat |
| IPR046848 | E motif |
| trEMBL term | Description |
|---|---|
| A0A2K3MST1 | _ |
| SwissProt term | Description |
|---|---|
| PPR83_ARATH | Putative pentatricopeptide repeat-containing protein At1g56570 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G56570 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Medicago sativa L. | MsG0180004675.01.T01 | _ |
| Oryza sativa L. | LOC_Os01g25270.1 | pentatricopeptide repeat protein PPR986-12, putative, expressed |
| Cucumis sativus L. | Csa001559 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000034s00002947.1 | _ |
| Codonopsis lanceolata | Cl_chr03_40090T | _ |
| Arachis hypogaea L. | AH13G57120.1 | Putative pentatricopeptide repeat-containing protein At1g56570 like |